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LOCUS XM_013247135 3102 bp mRNA linear INV 02-SEP-2023 (LOC106083856), transcript variant X18, mRNA. ACCESSION XM_013247135 VERSION XM_013247135.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247135.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3102 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3102 /gene="LOC106083856" /note="proton channel OtopLc; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106083856" CDS 129..2849 /gene="LOC106083856" /codon_start=1 /product="proton channel OtopLc isoform X17" /protein_id="XP_013102589.2" /db_xref="GeneID:106083856" /translation="MGNGGEVKVATVDVEGGDNMATLPVSRSHTTGSTDSAEKNNAAN KEMELKNVMPQPLQRTSLFIVTSLVYAIILIVVCIAYVISDVTTHRLPVLYYESFFTY LYGVSILFLLYVFCFLLQESSCCNGGNNQPKSPKKEKKSKKKEKDPADSKDAKGSKDS GKSGKPSPYQDTQVDAEVAVTPKNTRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIYIG LEFGSFFEIPFDSPCHHILIGVNPLLQMIFTFMQMYFIFMNARLNIHRFKVIARFGLM HVVATNICVWIRTLVKESLLEITLYHQRRESDPNESSIGQSIRQHALRHAGTVLRTHY GPNEEFEVLDGEDLLPKNAYTTNGALSKMLAKTVDGISKTLGMGSNEIADVVTTTTTT TARPAFTTPSYQWQSTTVARKLKKFITSTTAAATMGTSPTTTSTTTTTTTTALPITSP LATTTTTELPFNSYQHLYTTTASPAAAMAAAADHLAASNGGASEAAATAASSFDSSHV ASSVASFFSSLISSTPSPITTTTTNNPITVSSSMTDKATENSFGLINNLMENSFQTFS GISHPEAASIVTFENYENLDNIYPAALSSNVGTLNSTACGRVDIMGTIVYDSAPYLYP FIIEYSLIGAVVLYVMWKHIGRYPGRMNDDDLEHRLEVMLSRRAVAMAQQARSGRVDC VGSSKGLFFGLLLLVGALICLILFFVLVRHQQFSLLAIYLADASHCILMVFAILAIII GFIRVKNLKFRCEEQSNLNDILLRISAFGLFTYSVFSVISGSLKVLEHEPSLLVTTTS AVAVLQVILQLLFIADVSRRRVHLPEHDRSKPGRQIVTFLLICNVAMFAIYTFDAQKV YANPVQLDFYGFVPWAIIQRVTLPLCIFHRFHSAVTLAEIWKTTYKARLE" polyA_site 3102 /gene="LOC106083856" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 taattttaat agaaatccac aaattaaaat aaaaaattta aactaacaaa aacttaaaaa 61 cagtgtctga agaaaaaaga aaagaaaaca aataaaaccc taaagtttgt tacgaacctt 121 agacaacaat gggtaacggc ggtgaagtga aagtcgctac cgtcgatgtt gaaggaggcg 181 ataatatggc caccttgcca gtctcacgct cccatactac cggcagcacc gatagcgctg 241 aaaagaataa tgccgccaac aaggaaatgg aattaaaaaa tgttatgcca cagcccttgc 301 aaaggacatc gctgttcatt gtaaccagct tggtgtatgc catcattttg attgtggttt 361 gcattgctta cgttataagt gatgtgacaa cacatcgttt gcccgtgctg tactatgaga 421 gcttcttcac ctatttgtac ggagtcagca tactcttcct attgtatgtc ttctgttttc 481 tgttacagga aagttcctgt tgcaatggcg gcaacaatca accgaaatct cctaaaaaag 541 aaaagaagtc taaaaagaag gaaaaggatc ccgccgattc gaaagatgcg aaaggttcta 601 aggattctgg aaaaagtggc aaacccagtc cttatcagga cactcaagtt gatgctgaag 661 tagctgtaac acctaaaaat acacgaaaac gtaagacaac ccacagtgat ttgacccatg 721 gcagcttctt tttgcgagtt ggagctattg cttttggtct gggcgccatg atctacattg 781 gtttggagtt tggttcgttc tttgaaatcc ccttcgattc tccctgccat catatcttga 841 ttggtgtaaa tccattgttg caaatgattt ttaccttcat gcaaatgtac ttcatcttta 901 tgaatgccag attgaatatt caccgtttca aggtcattgc ccgttttggc ctcatgcatg 961 tggtggccac taacatatgt gtctggatac gcaccctggt caaggaatcc ctgcttgaaa 1021 ttactttgta tcatcaacgt cgtgaatccg atcccaatga gtcttcaata ggtcaatcta 1081 tacgtcagca tgccttacgt cacgccggca ctgtgttgcg cacccactat ggacccaatg 1141 aagagttcga ggtattagat ggtgaagacc ttttgcccaa gaatgcctac accaccaacg 1201 gtgctctatc caagatgttg gccaaaacag tggatggaat ttcgaaaact ttgggcatgg 1261 gatccaatga aattgctgat gtggtgacca ccactactac caccaccgca agaccggcat 1321 ttaccacccc cagttatcaa tggcaaagca ctactgtggc acgcaagttg aagaagttta 1381 tcactagtac cacggcggcg gcaaccatgg gtacctcccc cactaccacc tcaacgacga 1441 ccaccaccac caccacggct ttgccgatca cctcaccatt ggcgacaaca acgaccacag 1501 aattaccctt taacagttac cagcatttgt atacgacgac tgcctcaccc gctgctgcaa 1561 tggccgccgc cgccgatcac ttggccgcct ccaatggagg agcgtctgaa gcggctgcaa 1621 ctgctgcctc atcatttgat agctctcatg tggcctctag tgtagcctca tttttctctt 1681 cactcatctc tagcacccca tcacccatca caactaccac caccaacaat cccatcactg 1741 tctcctcctc catgacggac aaagccaccg agaattcatt tggcctcatt aacaatctca 1801 tggaaaatag tttccaaacc ttttccggca tctcccatcc cgaagccgct agtattgtga 1861 cctttgaaaa ttatgaaaat ctggacaaca tctatcccgc cgccctatcc tccaatgtgg 1921 gtaccttaaa ctccactgcc tgtggtcgtg tggacattat gggcaccatt gtgtacgatt 1981 cggctcccta tctgtatccc ttcatcatag aatattccct cattggcgcc gttgtcctct 2041 atgtgatgtg gaagcatatt ggacgttatc ctggacgcat gaacgacgac gacttggaac 2101 atcgcctaga ggttatgctc tcgcggcgtg ctgtggccat ggcccagcag gctcgttctg 2161 gtcgcgtgga ctgcgttggc tcttcgaaag gtttattctt tggtctattg ttgttggtgg 2221 gtgctttgat atgtttgata ctcttcttcg tcttggtgcg tcatcagcag ttctcgttgc 2281 tggccatcta tttggccgat gccagtcatt gtattttaat ggtatttgcc atattggcca 2341 taatcatagg ttttataaga gttaagaatc tgaaattccg ctgcgaggaa caatccaact 2401 tgaatgacat tctcttgcgc atctccgctt tcggcctctt cacctattcc gtattctctg 2461 tgatctcggg cagcctcaaa gttttggaac acgaacccag cctcttggtt accaccacca 2521 gcgccgttgc cgttctgcag gtcatccttc agttgttgtt cattgccgat gtttcccgcc 2581 gtcgcgtcca tttgcccgaa catgatcgca gcaaacccgg tcgtcaaatt gtcaccttcc 2641 ttttgatctg caatgtggcc atgttcgcca tttacacttt cgatgctcaa aaagtatacg 2701 ccaatcccgt gcaattggac ttttatggct ttgtgccatg ggccatcata cagcgtgtaa 2761 cactgccact gtgcattttc catcgattcc atagcgctgt aacactagcc gagatctgga 2821 agaccaccta taaagcgcgt ttggagtaaa tcaattaaac accgatcgaa acatcaccgc 2881 caacaccacc acaacaacaa caacaacaaa attaccacaa caacacaaca aaacaaaaac 2941 attcaattac atttaaggaa attttttggg aaaaaaccaa accaaaccaa caacaaaagc 3001 tagtaaagaa gaagaaaaaa ccgacttttt tgaaggcaga aaaaaaaata ttatcagaaa 3061 atgttagtga atcgtaaaaa caaaactcaa tattaatgaa aa