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LOCUS XM_013247134 5144 bp mRNA linear INV 02-SEP-2023 (LOC106083856), transcript variant X16, mRNA. ACCESSION XM_013247134 VERSION XM_013247134.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247134.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5144 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5144 /gene="LOC106083856" /note="proton channel OtopLc; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106083856" CDS 1790..4891 /gene="LOC106083856" /codon_start=1 /product="uncharacterized protein LOC106083856 isoform X15" /protein_id="XP_013102588.2" /db_xref="GeneID:106083856" /translation="MQRCPYIHEMRERLLNDQNRESLPLEQMERANLLDNRQSAELQQ LNGDGYHTSPAHQRTPLVPRDLGEDFNLDFDDDFPIEVRRPKNAKVVYSLKPNSNNRS YLPANITVHGTYHTNIITGPIELWTSLFIVTSLVYAIILIVVCIAYVISDVTTHRLPV LYYESFFTYLYGVSILFLLYVFCFLLQESSCCNGGNNQPKSPKKEKKSKKKEKDPADS KDAKGSKDSGKSGKPSPYQALYGKLSTCCKGVAVFVYIVILIALIFHFILVFHWTVSM VVFLILLILHYLLIPKFLRASDTQVDAEVAVTPKNTRKRKTTHSDLTHGSFFLRVGAI AFGLGAMIYIGLEFGSFFEIPFDSPCHHILIGVNPLLQMIFTFMQMYFIFMNARLNIH RFKVIARFGLMHVVATNICVWIRTLVKESLLEITLYHQRRESDPNESSIGQSIRQHAL RHAGTVLRTHYGPNEEFEVLDGEDLLPKNAYTTNGALSKMLAKTVDGISKTLGMGSNE IADVVTTTTTTTARPAFTTPSYQWQSTTVARKLKKFITSTTAAATMGTSPTTTSTTTT TTTTALPITSPLATTTTTELPFNSYQHLYTTTASPAAAMAAAADHLAASNGGASEAAA TAASSFDSSHVASSVASFFSSLISSTPSPITTTTTNNPITVSSSMTDKATENSFGLIN NLMENSFQTFSGISHPEAASIVTFENYENLDNIYPAALSSNVGTLNSTACGRVDIMGT IVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGRYPGRMNDDDLEHRLEVMLSRRAVAM AQQARSGRVDCVGSSKGLFFGLLLLVGALICLILFFVLVRHQQFSLLAIYLADASHCI LMVFAILAIIIGFIRVKNLKFRCEEQSNLNDILLRISAFGLFTYSVFSVISGSLKVLE HEPSLLVTTTSAVAVLQVILQLLFIADVSRRRVHLPEHDRSKPGRQIVTFLLICNVAM FAIYTFDAQKVYANPVQLDFYGFVPWAIIQRVTLPLCIFHRFHSAVTLAEIWKTTYKA RLE" polyA_site 5144 /gene="LOC106083856" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cggtagttcc aatcagtctg aaacgaattg ttgtgaacga tggaagaaaa taaaaacgtt 61 tgaaaaaaat ttggtgtaga acgttgagac agacatcata gtgaccgttt atttgtgtgt 121 gtagtaaatc aaatcagaat atagagtccg aatcagtggt gtttgctggt gagaattgtg 181 ttgtggcttg gtagtgcaaa aaaggaaata gtgaagtctg ccaggaagtt actaaaagag 241 agagtgaata aatgtgctaa atatttaata aaaaggaatt ggagttacat tgaaaatata 301 gaaaagaaaa acatatcaaa aaagagtttc tgacaaaacc aaagtttata tcaaaattgt 361 tgtaatacta tttaacaaaa aaaaaaaaaa gccccaagtg ccatagttgc cagagaagtc 421 tgcctataaa acaaaagtat tttttgcatc tttaaaacaa aaattaaata aaaaaaacaa 481 aatcctttcg cttttgctga gccatacaaa agtagccata attgactctt taatcaaacc 541 ctaaacaaaa tcaaagtcct ttgtgtctac aaaataacgg ctactcacac ctttgtttgt 601 tcgccaaaga gtaaaagtat caacaaacaa aactaaaaat atactgttaa tcatacacac 661 actcacacac actgtcctgt gtaagcgcat acaaacacag cgtgtctagg atgttcacaa 721 atccatcatc ttcatcatta tcatctctac ctttataact ggatgtcctc accttggcag 781 caggactgac acacagtgtg tttgttgttg ctattcaaag tgaagtacca aaaataaaca 841 acagcaaaaa attgagattt tatagcaaca gtgtttggtg gataggaata gaaagaaata 901 ccaaaacaaa cgcaaacaac aactaccacc ctcataaaag tttgcttgtt aacgaggaga 961 aaaaactgaa ttaaggaaag tagacataaa aaaggataca aaatttcccc ttgtataaaa 1021 ttgtttgcct tgctattaaa tcataagtgt tggcaccttt ccccccctta acgaaatcat 1081 cactgccaaa aattcatatc gaaattggta gtaaattatc gattaaaaaa aaaaaacaac 1141 caaacaacaa cctcgttaaa ttgtttgcaa ttgattgatt gatttcgtgc tggttgatta 1201 aatccaagtg cgtgtgtatg taatcggcta aatttcggtt tgacaataat taagtcatac 1261 ttaagcttga attcatcaac ctaaagtgga tgaaattaat tgtggacttt tttcaagtac 1321 aatacatcaa agtcatcatt gtcgtgctaa agaagctcat cgtgacaacc atataagcga 1381 gactgcctca atctatttgg acaatacaac tctacacacc taagattatt aactggttat 1441 caaaacaata aaattgacca aatttattct ccagcaaagc taaatggaat ttcaacaaaa 1501 tcgactgatt tttgactatt agatatacaa caaataacaa aaagaagatc aaaacaaaaa 1561 aatttatata cacacaaaaa aattgattag gactttttct acaaatccaa aaaaacaaat 1621 aataaaaaaa aaaaaaaaca caaaaccccc attccctcca atatcaaaat cagctttatt 1681 ctataaactc cagggaaatt aaaaacaaac cctttaacac atacaaaaaa agtattatcc 1741 tacagcagca ttattcgatt tccccatccc ctcctgttac cgataaggaa tgcagcgttg 1801 tccctatata catgaaatgc gagaacgttt attgaacgat cagaatcgtg aatcattacc 1861 acttgaacaa atggagcgag caaatctttt ggataacaga cagtcggctg aattacaaca 1921 gctgaatggc gatggatatc acacaagtcc agcccatcaa cgtacgcccc tggtgcctag 1981 agatttgggc gaagatttca acttggattt cgatgatgat ttccccatag aagtaagaag 2041 gcctaaaaat gctaaggtcg tttattcact aaaaccaaat tcgaataatc gcagttattt 2101 accggcgaat ataaccgtac atggcacata tcacaccaat atcataaccg gaccaattga 2161 attatggaca tcgctgttca ttgtaaccag cttggtgtat gccatcattt tgattgtggt 2221 ttgcattgct tacgttataa gtgatgtgac aacacatcgt ttgcccgtgc tgtactatga 2281 gagcttcttc acctatttgt acggagtcag catactcttc ctattgtatg tcttctgttt 2341 tctgttacag gaaagttcct gttgcaatgg cggcaacaat caaccgaaat ctcctaaaaa 2401 agaaaagaag tctaaaaaga aggaaaagga tcccgccgat tcgaaagatg cgaaaggttc 2461 taaggattct ggaaaaagtg gcaaacccag tccttatcag gccctgtatg gaaagctgag 2521 cacttgttgc aaaggggttg ccgtttttgt ttacattgtt atattgattg ccctaatctt 2581 ccattttata ctggttttcc attggactgt ctcaatggta gtttttctta tactgttaat 2641 acttcactat ctcttgatac cgaaattctt acgtgcgtcg gacactcaag ttgatgctga 2701 agtagctgta acacctaaaa atacacgaaa acgtaagaca acccacagtg atttgaccca 2761 tggcagcttc tttttgcgag ttggagctat tgcttttggt ctgggcgcca tgatctacat 2821 tggtttggag tttggttcgt tctttgaaat ccccttcgat tctccctgcc atcatatctt 2881 gattggtgta aatccattgt tgcaaatgat ttttaccttc atgcaaatgt acttcatctt 2941 tatgaatgcc agattgaata ttcaccgttt caaggtcatt gcccgttttg gcctcatgca 3001 tgtggtggcc actaacatat gtgtctggat acgcaccctg gtcaaggaat ccctgcttga 3061 aattactttg tatcatcaac gtcgtgaatc cgatcccaat gagtcttcaa taggtcaatc 3121 tatacgtcag catgccttac gtcacgccgg cactgtgttg cgcacccact atggacccaa 3181 tgaagagttc gaggtattag atggtgaaga ccttttgccc aagaatgcct acaccaccaa 3241 cggtgctcta tccaagatgt tggccaaaac agtggatgga atttcgaaaa ctttgggcat 3301 gggatccaat gaaattgctg atgtggtgac caccactact accaccaccg caagaccggc 3361 atttaccacc cccagttatc aatggcaaag cactactgtg gcacgcaagt tgaagaagtt 3421 tatcactagt accacggcgg cggcaaccat gggtacctcc cccactacca cctcaacgac 3481 gaccaccacc accaccacgg ctttgccgat cacctcacca ttggcgacaa caacgaccac 3541 agaattaccc tttaacagtt accagcattt gtatacgacg actgcctcac ccgctgctgc 3601 aatggccgcc gccgccgatc acttggccgc ctccaatgga ggagcgtctg aagcggctgc 3661 aactgctgcc tcatcatttg atagctctca tgtggcctct agtgtagcct catttttctc 3721 ttcactcatc tctagcaccc catcacccat cacaactacc accaccaaca atcccatcac 3781 tgtctcctcc tccatgacgg acaaagccac cgagaattca tttggcctca ttaacaatct 3841 catggaaaat agtttccaaa ccttttccgg catctcccat cccgaagccg ctagtattgt 3901 gacctttgaa aattatgaaa atctggacaa catctatccc gccgccctat cctccaatgt 3961 gggtacctta aactccactg cctgtggtcg tgtggacatt atgggcacca ttgtgtacga 4021 ttcggctccc tatctgtatc ccttcatcat agaatattcc ctcattggcg ccgttgtcct 4081 ctatgtgatg tggaagcata ttggacgtta tcctggacgc atgaacgacg acgacttgga 4141 acatcgccta gaggttatgc tctcgcggcg tgctgtggcc atggcccagc aggctcgttc 4201 tggtcgcgtg gactgcgttg gctcttcgaa aggtttattc tttggtctat tgttgttggt 4261 gggtgctttg atatgtttga tactcttctt cgtcttggtg cgtcatcagc agttctcgtt 4321 gctggccatc tatttggccg atgccagtca ttgtatttta atggtatttg ccatattggc 4381 cataatcata ggttttataa gagttaagaa tctgaaattc cgctgcgagg aacaatccaa 4441 cttgaatgac attctcttgc gcatctccgc tttcggcctc ttcacctatt ccgtattctc 4501 tgtgatctcg ggcagcctca aagttttgga acacgaaccc agcctcttgg ttaccaccac 4561 cagcgccgtt gccgttctgc aggtcatcct tcagttgttg ttcattgccg atgtttcccg 4621 ccgtcgcgtc catttgcccg aacatgatcg cagcaaaccc ggtcgtcaaa ttgtcacctt 4681 ccttttgatc tgcaatgtgg ccatgttcgc catttacact ttcgatgctc aaaaagtata 4741 cgccaatccc gtgcaattgg acttttatgg ctttgtgcca tgggccatca tacagcgtgt 4801 aacactgcca ctgtgcattt tccatcgatt ccatagcgct gtaacactag ccgagatctg 4861 gaagaccacc tataaagcgc gtttggagta aatcaattaa acaccgatcg aaacatcacc 4921 gccaacacca ccacaacaac aacaacaaca aaattaccac aacaacacaa caaaacaaaa 4981 acattcaatt acatttaagg aaattttttg ggaaaaaacc aaaccaaacc aacaacaaaa 5041 gctagtaaag aagaagaaaa aaccgacttt tttgaaggca gaaaaaaaaa tattatcaga 5101 aaatgttagt gaatcgtaaa aacaaaactc aatattaatg aaaa