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LOCUS XM_013247132 3121 bp mRNA linear INV 02-SEP-2023 (LOC106083856), transcript variant X15, mRNA. ACCESSION XM_013247132 VERSION XM_013247132.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247132.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3121 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3121 /gene="LOC106083856" /note="proton channel OtopLc; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106083856" CDS 136..2868 /gene="LOC106083856" /codon_start=1 /product="proton channel OtopLc isoform X14" /protein_id="XP_013102586.2" /db_xref="GeneID:106083856" /translation="MGNGGEVKVATVDVEGGDNMATLPVSRSHTTGSTDSAEKNNAAN KEMELKNVMPQPLQRTSLFIVTSLVYAIILIVVCIAYVISDVTTHRLPVLYYESFFTY LYGVSILFLLYVFCFLLQESSCCNGGNNQPKSPKKEKKSKKKEKDPADSKDAKGSKDS GKSGKPSPYQDTQVDAEVAVTPKNTRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIYIG LEFGSFFEIPFDSPCHHILIGVNPLLQMIFTFMQMYFIFMNARLNIHRFKVIARFGLM HVVATNICVWIRTLVKESLLEITLYHQRRESDPNESSIGQSIRQHALRHAGTVLRTHY GPNEEFEVLDGEDLLPKNAYTTNGALSKMLAKTVDGISKTLGMGSNEIADVVTTTTTT TARPAFTTPSYQWQSTTVARKLKKFITSTTAAATMGTSPTTTSTTTTTTTTALPITSP LATTTTTELPFNSYQHLYTTTASPAAAMAAAADHLAASNGGASEAAATAASSFDSSHV ASSVASFFSSLISSTPSPITTTTTNNPITVSSSMTDKATENSFGLINNLMENSFQTFS GISHPEAASIVTFENYENLDNIYPAALSSNVGTLNSTACGRVDIMGTIVYDSAPYLYP FIIEYSLIGAVVLYVMWKHIGRYPGRMNDDDLEHRLEVMLSRRAVAMAQQARSGRVDC VGSSKGLFFGLLLLVGALICLILFFVLVRHQQFSLLAIYLADASHCILMVFAILAIII GFIRVKNLKFRCEEQSNLNDILLRISAFGLFTYSVFSVISGSLKVLEHEPSLLVTTTS AVAVLQVILQLLFIADVSRRRVHLPEHDRSKPGRQIVTFLLICNVAMFAIYTFDAQKV YANPVSRYVQLDFYGFVPWAIIQRVTLPLCIFHRFHSAVTLAEIWKTTYKARLE" polyA_site 3121 /gene="LOC106083856" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgtgaaataa ttttaataga aatccacaaa ttaaaataaa aaatttaaac taacaaaaac 61 ttaaaaacag tgtctgaaga aaaaagaaaa gaaaacaaat aaaaccctaa agtttgttac 121 gaaccttaga caacaatggg taacggcggt gaagtgaaag tcgctaccgt cgatgttgaa 181 ggaggcgata atatggccac cttgccagtc tcacgctccc atactaccgg cagcaccgat 241 agcgctgaaa agaataatgc cgccaacaag gaaatggaat taaaaaatgt tatgccacag 301 cccttgcaaa ggacatcgct gttcattgta accagcttgg tgtatgccat cattttgatt 361 gtggtttgca ttgcttacgt tataagtgat gtgacaacac atcgtttgcc cgtgctgtac 421 tatgagagct tcttcaccta tttgtacgga gtcagcatac tcttcctatt gtatgtcttc 481 tgttttctgt tacaggaaag ttcctgttgc aatggcggca acaatcaacc gaaatctcct 541 aaaaaagaaa agaagtctaa aaagaaggaa aaggatcccg ccgattcgaa agatgcgaaa 601 ggttctaagg attctggaaa aagtggcaaa cccagtcctt atcaggacac tcaagttgat 661 gctgaagtag ctgtaacacc taaaaataca cgaaaacgta agacaaccca cagtgatttg 721 acccatggca gcttcttttt gcgagttgga gctattgctt ttggtctggg cgccatgatc 781 tacattggtt tggagtttgg ttcgttcttt gaaatcccct tcgattctcc ctgccatcat 841 atcttgattg gtgtaaatcc attgttgcaa atgattttta ccttcatgca aatgtacttc 901 atctttatga atgccagatt gaatattcac cgtttcaagg tcattgcccg ttttggcctc 961 atgcatgtgg tggccactaa catatgtgtc tggatacgca ccctggtcaa ggaatccctg 1021 cttgaaatta ctttgtatca tcaacgtcgt gaatccgatc ccaatgagtc ttcaataggt 1081 caatctatac gtcagcatgc cttacgtcac gccggcactg tgttgcgcac ccactatgga 1141 cccaatgaag agttcgaggt attagatggt gaagaccttt tgcccaagaa tgcctacacc 1201 accaacggtg ctctatccaa gatgttggcc aaaacagtgg atggaatttc gaaaactttg 1261 ggcatgggat ccaatgaaat tgctgatgtg gtgaccacca ctactaccac caccgcaaga 1321 ccggcattta ccacccccag ttatcaatgg caaagcacta ctgtggcacg caagttgaag 1381 aagtttatca ctagtaccac ggcggcggca accatgggta cctcccccac taccacctca 1441 acgacgacca ccaccaccac cacggctttg ccgatcacct caccattggc gacaacaacg 1501 accacagaat taccctttaa cagttaccag catttgtata cgacgactgc ctcacccgct 1561 gctgcaatgg ccgccgccgc cgatcacttg gccgcctcca atggaggagc gtctgaagcg 1621 gctgcaactg ctgcctcatc atttgatagc tctcatgtgg cctctagtgt agcctcattt 1681 ttctcttcac tcatctctag caccccatca cccatcacaa ctaccaccac caacaatccc 1741 atcactgtct cctcctccat gacggacaaa gccaccgaga attcatttgg cctcattaac 1801 aatctcatgg aaaatagttt ccaaaccttt tccggcatct cccatcccga agccgctagt 1861 attgtgacct ttgaaaatta tgaaaatctg gacaacatct atcccgccgc cctatcctcc 1921 aatgtgggta ccttaaactc cactgcctgt ggtcgtgtgg acattatggg caccattgtg 1981 tacgattcgg ctccctatct gtatcccttc atcatagaat attccctcat tggcgccgtt 2041 gtcctctatg tgatgtggaa gcatattgga cgttatcctg gacgcatgaa cgacgacgac 2101 ttggaacatc gcctagaggt tatgctctcg cggcgtgctg tggccatggc ccagcaggct 2161 cgttctggtc gcgtggactg cgttggctct tcgaaaggtt tattctttgg tctattgttg 2221 ttggtgggtg ctttgatatg tttgatactc ttcttcgtct tggtgcgtca tcagcagttc 2281 tcgttgctgg ccatctattt ggccgatgcc agtcattgta ttttaatggt atttgccata 2341 ttggccataa tcataggttt tataagagtt aagaatctga aattccgctg cgaggaacaa 2401 tccaacttga atgacattct cttgcgcatc tccgctttcg gcctcttcac ctattccgta 2461 ttctctgtga tctcgggcag cctcaaagtt ttggaacacg aacccagcct cttggttacc 2521 accaccagcg ccgttgccgt tctgcaggtc atccttcagt tgttgttcat tgccgatgtt 2581 tcccgccgtc gcgtccattt gcccgaacat gatcgcagca aacccggtcg tcaaattgtc 2641 accttccttt tgatctgcaa tgtggccatg ttcgccattt acactttcga tgctcaaaaa 2701 gtatacgcca atcccgtaag tagatatgtg caattggact tttatggctt tgtgccatgg 2761 gccatcatac agcgtgtaac actgccactg tgcattttcc atcgattcca tagcgctgta 2821 acactagccg agatctggaa gaccacctat aaagcgcgtt tggagtaaat caattaaaca 2881 ccgatcgaaa catcaccgcc aacaccacca caacaacaac aacaacaaaa ttaccacaac 2941 aacacaacaa aacaaaaaca ttcaattaca tttaaggaaa ttttttggga aaaaaccaaa 3001 ccaaaccaac aacaaaagct agtaaagaag aagaaaaaac cgactttttt gaaggcagaa 3061 aaaaaaatat tatcagaaaa tgttagtgaa tcgtaaaaac aaaactcaat attaatgaaa 3121 a