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LOCUS XM_013247131 3099 bp mRNA linear INV 02-SEP-2023 (LOC106083856), transcript variant X14, mRNA. ACCESSION XM_013247131 VERSION XM_013247131.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247131.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3099 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3099 /gene="LOC106083856" /note="proton channel OtopLc; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106083856" CDS 93..2846 /gene="LOC106083856" /codon_start=1 /product="uncharacterized protein LOC106083856 isoform X13" /protein_id="XP_013102585.2" /db_xref="GeneID:106083856" /translation="MKRKEMTSLFIVTSLVYAIILIVVCIAYVISDVTTHRLPVLYYE SFFTYLYGVSILFLLYVFCFLLQESSCCNGGNNQPKSPKKEKKSKKKEKDPADSKDAK GSKDSGKSGKPSPYQALYGKLSTCCKGVAVFVYIVILIALIFHFILVFHWTVSMVVFL ILLILHYLLIPKFLRASDTQVDAEVAVTPKNTRKRKTTHSDLTHGSFFLRVGAIAFGL GAMIYIGLEFGSFFEIPFDSPCHHILIGVNPLLQMIFTFMQMYFIFMNARLNIHRFKV IARFGLMHVVATNICVWIRTLVKESLLEITLYHQRRESDPNESSIGQSIRQHALRHAG TVLRTHYGPNEEFEVLDGEDLLPKNAYTTNGALSKMLAKTVDGISKTLGMGSNEIADV VTTTTTTTARPAFTTPSYQWQSTTVARKLKKFITSTTAAATMGTSPTTTSTTTTTTTT ALPITSPLATTTTTELPFNSYQHLYTTTASPAAAMAAAADHLAASNGGASEAAATAAS SFDSSHVASSVASFFSSLISSTPSPITTTTTNNPITVSSSMTDKATENSFGLINNLME NSFQTFSGISHPEAASIVTFENYENLDNIYPAALSSNVGTLNSTACGRVDIMGTIVYD SAPYLYPFIIEYSLIGAVVLYVMWKHIGRYPGRMNDDDLEHRLEVMLSRRAVAMAQQA RSGRVDCVGSSKGLFFGLLLLVGALICLILFFVLVRHQQFSLLAIYLADASHCILMVF AILAIIIGFIRVKNLKFRCEEQSNLNDILLRISAFGLFTYSVFSVISGSLKVLEHEPS LLVTTTSAVAVLQVILQLLFIADVSRRRVHLPEHDRSKPGRQIVTFLLICNVAMFAIY TFDAQKVYANPVSRYVQLDFYGFVPWAIIQRVTLPLCIFHRFHSAVTLAEIWKTTYKA RLE" polyA_site 3099 /gene="LOC106083856" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgaagaatca aaaagtttga atttaaacaa aactaaatca ttgatcatct ttgaaaaaaa 61 aactaaatca tttcataatc atcaaacccc aaatgaaaag aaaagaaatg acatcgctgt 121 tcattgtaac cagcttggtg tatgccatca ttttgattgt ggtttgcatt gcttacgtta 181 taagtgatgt gacaacacat cgtttgcccg tgctgtacta tgagagcttc ttcacctatt 241 tgtacggagt cagcatactc ttcctattgt atgtcttctg ttttctgtta caggaaagtt 301 cctgttgcaa tggcggcaac aatcaaccga aatctcctaa aaaagaaaag aagtctaaaa 361 agaaggaaaa ggatcccgcc gattcgaaag atgcgaaagg ttctaaggat tctggaaaaa 421 gtggcaaacc cagtccttat caggccctgt atggaaagct gagcacttgt tgcaaagggg 481 ttgccgtttt tgtttacatt gttatattga ttgccctaat cttccatttt atactggttt 541 tccattggac tgtctcaatg gtagtttttc ttatactgtt aatacttcac tatctcttga 601 taccgaaatt cttacgtgcg tcggacactc aagttgatgc tgaagtagct gtaacaccta 661 aaaatacacg aaaacgtaag acaacccaca gtgatttgac ccatggcagc ttctttttgc 721 gagttggagc tattgctttt ggtctgggcg ccatgatcta cattggtttg gagtttggtt 781 cgttctttga aatccccttc gattctccct gccatcatat cttgattggt gtaaatccat 841 tgttgcaaat gatttttacc ttcatgcaaa tgtacttcat ctttatgaat gccagattga 901 atattcaccg tttcaaggtc attgcccgtt ttggcctcat gcatgtggtg gccactaaca 961 tatgtgtctg gatacgcacc ctggtcaagg aatccctgct tgaaattact ttgtatcatc 1021 aacgtcgtga atccgatccc aatgagtctt caataggtca atctatacgt cagcatgcct 1081 tacgtcacgc cggcactgtg ttgcgcaccc actatggacc caatgaagag ttcgaggtat 1141 tagatggtga agaccttttg cccaagaatg cctacaccac caacggtgct ctatccaaga 1201 tgttggccaa aacagtggat ggaatttcga aaactttggg catgggatcc aatgaaattg 1261 ctgatgtggt gaccaccact actaccacca ccgcaagacc ggcatttacc acccccagtt 1321 atcaatggca aagcactact gtggcacgca agttgaagaa gtttatcact agtaccacgg 1381 cggcggcaac catgggtacc tcccccacta ccacctcaac gacgaccacc accaccacca 1441 cggctttgcc gatcacctca ccattggcga caacaacgac cacagaatta ccctttaaca 1501 gttaccagca tttgtatacg acgactgcct cacccgctgc tgcaatggcc gccgccgccg 1561 atcacttggc cgcctccaat ggaggagcgt ctgaagcggc tgcaactgct gcctcatcat 1621 ttgatagctc tcatgtggcc tctagtgtag cctcattttt ctcttcactc atctctagca 1681 ccccatcacc catcacaact accaccacca acaatcccat cactgtctcc tcctccatga 1741 cggacaaagc caccgagaat tcatttggcc tcattaacaa tctcatggaa aatagtttcc 1801 aaaccttttc cggcatctcc catcccgaag ccgctagtat tgtgaccttt gaaaattatg 1861 aaaatctgga caacatctat cccgccgccc tatcctccaa tgtgggtacc ttaaactcca 1921 ctgcctgtgg tcgtgtggac attatgggca ccattgtgta cgattcggct ccctatctgt 1981 atcccttcat catagaatat tccctcattg gcgccgttgt cctctatgtg atgtggaagc 2041 atattggacg ttatcctgga cgcatgaacg acgacgactt ggaacatcgc ctagaggtta 2101 tgctctcgcg gcgtgctgtg gccatggccc agcaggctcg ttctggtcgc gtggactgcg 2161 ttggctcttc gaaaggttta ttctttggtc tattgttgtt ggtgggtgct ttgatatgtt 2221 tgatactctt cttcgtcttg gtgcgtcatc agcagttctc gttgctggcc atctatttgg 2281 ccgatgccag tcattgtatt ttaatggtat ttgccatatt ggccataatc ataggtttta 2341 taagagttaa gaatctgaaa ttccgctgcg aggaacaatc caacttgaat gacattctct 2401 tgcgcatctc cgctttcggc ctcttcacct attccgtatt ctctgtgatc tcgggcagcc 2461 tcaaagtttt ggaacacgaa cccagcctct tggttaccac caccagcgcc gttgccgttc 2521 tgcaggtcat ccttcagttg ttgttcattg ccgatgtttc ccgccgtcgc gtccatttgc 2581 ccgaacatga tcgcagcaaa cccggtcgtc aaattgtcac cttccttttg atctgcaatg 2641 tggccatgtt cgccatttac actttcgatg ctcaaaaagt atacgccaat cccgtaagta 2701 gatatgtgca attggacttt tatggctttg tgccatgggc catcatacag cgtgtaacac 2761 tgccactgtg cattttccat cgattccata gcgctgtaac actagccgag atctggaaga 2821 ccacctataa agcgcgtttg gagtaaatca attaaacacc gatcgaaaca tcaccgccaa 2881 caccaccaca acaacaacaa caacaaaatt accacaacaa cacaacaaaa caaaaacatt 2941 caattacatt taaggaaatt ttttgggaaa aaaccaaacc aaaccaacaa caaaagctag 3001 taaagaagaa gaaaaaaccg acttttttga aggcagaaaa aaaaatatta tcagaaaatg 3061 ttagtgaatc gtaaaaacaa aactcaatat taatgaaaa