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LOCUS XM_013247130 3310 bp mRNA linear INV 02-SEP-2023 (LOC106083856), transcript variant X12, mRNA. ACCESSION XM_013247130 VERSION XM_013247130.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247130.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3310 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3310 /gene="LOC106083856" /note="proton channel OtopLc; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106083856" CDS 145..3057 /gene="LOC106083856" /codon_start=1 /product="uncharacterized protein LOC106083856 isoform X11" /protein_id="XP_013102584.2" /db_xref="GeneID:106083856" /translation="MGNGGEVKVATVDVEGGDNMATLPVSRSHTTGSTDSAEKNNAAN KEMELKNVMPQPLQRTSLFIVTSLVYAIILIVVCIAYVISDVTTHRLPVLYYESFFTY LYGVSILFLLYVFCFLLQESSCCNGGNNQPKSPKKEKKSKKKEKDPADSKDAKGSKDS GKSGKPSPYQALYGKLSTCCKGVAVFVYIVILIALIFHFILVFHWTVSMVVFLILLIL HYLLIPKFLRASDTQVDAEVAVTPKNTRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIY IGLEFGSFFEIPFDSPCHHILIGVNPLLQMIFTFMQMYFIFMNARLNIHRFKVIARFG LMHVVATNICVWIRTLVKESLLEITLYHQRRESDPNESSIGQSIRQHALRHAGTVLRT HYGPNEEFEVLDGEDLLPKNAYTTNGALSKMLAKTVDGISKTLGMGSNEIADVVTTTT TTTARPAFTTPSYQWQSTTVARKLKKFITSTTAAATMGTSPTTTSTTTTTTTTALPIT SPLATTTTTELPFNSYQHLYTTTASPAAAMAAAADHLAASNGGASEAAATAASSFDSS HVASSVASFFSSLISSTPSPITTTTTNNPITVSSSMTDKATENSFGLINNLMENSFQT FSGISHPEAASIVTFENYENLDNIYPAALSSNVGTLNSTACGRVDIMGTIVYDSAPYL YPFIIEYSLIGAVVLYVMWKHIGRYPGRMNDDDLEHRLEVMLSRRAVAMAQQARSGRV DCVGSSKGLFFGLLLLVGALICLILFFVLVRHQQFSLLAIYLADASHCILMVFAILAI IIGFIRVKNLKFRCEEQSNLNDILLRISAFGLFTYSVFSVISGSLKVLEHEPSLLVTT TSAVAVLQVILQLLFIADVSRRRVHLPEHDRSKPGRQIVTFLLICNVAMFAIYTFDAQ KVYANPVSRYVQLDFYGFVPWAIIQRVTLPLCIFHRFHSAVTLAEIWKTTYKARLE" polyA_site 3310 /gene="LOC106083856" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aataaaaaat gtgaaataat tttaatagaa atccacaaat taaaataaaa aatttaaact 61 aacaaaaact taaaaacagt gtctgaagaa aaaagaaaag aaaacaaata aaaccctaaa 121 gtttgttacg aaccttagac aacaatgggt aacggcggtg aagtgaaagt cgctaccgtc 181 gatgttgaag gaggcgataa tatggccacc ttgccagtct cacgctccca tactaccggc 241 agcaccgata gcgctgaaaa gaataatgcc gccaacaagg aaatggaatt aaaaaatgtt 301 atgccacagc ccttgcaaag gacatcgctg ttcattgtaa ccagcttggt gtatgccatc 361 attttgattg tggtttgcat tgcttacgtt ataagtgatg tgacaacaca tcgtttgccc 421 gtgctgtact atgagagctt cttcacctat ttgtacggag tcagcatact cttcctattg 481 tatgtcttct gttttctgtt acaggaaagt tcctgttgca atggcggcaa caatcaaccg 541 aaatctccta aaaaagaaaa gaagtctaaa aagaaggaaa aggatcccgc cgattcgaaa 601 gatgcgaaag gttctaagga ttctggaaaa agtggcaaac ccagtcctta tcaggccctg 661 tatggaaagc tgagcacttg ttgcaaaggg gttgccgttt ttgtttacat tgttatattg 721 attgccctaa tcttccattt tatactggtt ttccattgga ctgtctcaat ggtagttttt 781 cttatactgt taatacttca ctatctcttg ataccgaaat tcttacgtgc gtcggacact 841 caagttgatg ctgaagtagc tgtaacacct aaaaatacac gaaaacgtaa gacaacccac 901 agtgatttga cccatggcag cttctttttg cgagttggag ctattgcttt tggtctgggc 961 gccatgatct acattggttt ggagtttggt tcgttctttg aaatcccctt cgattctccc 1021 tgccatcata tcttgattgg tgtaaatcca ttgttgcaaa tgatttttac cttcatgcaa 1081 atgtacttca tctttatgaa tgccagattg aatattcacc gtttcaaggt cattgcccgt 1141 tttggcctca tgcatgtggt ggccactaac atatgtgtct ggatacgcac cctggtcaag 1201 gaatccctgc ttgaaattac tttgtatcat caacgtcgtg aatccgatcc caatgagtct 1261 tcaataggtc aatctatacg tcagcatgcc ttacgtcacg ccggcactgt gttgcgcacc 1321 cactatggac ccaatgaaga gttcgaggta ttagatggtg aagacctttt gcccaagaat 1381 gcctacacca ccaacggtgc tctatccaag atgttggcca aaacagtgga tggaatttcg 1441 aaaactttgg gcatgggatc caatgaaatt gctgatgtgg tgaccaccac tactaccacc 1501 accgcaagac cggcatttac cacccccagt tatcaatggc aaagcactac tgtggcacgc 1561 aagttgaaga agtttatcac tagtaccacg gcggcggcaa ccatgggtac ctcccccact 1621 accacctcaa cgacgaccac caccaccacc acggctttgc cgatcacctc accattggcg 1681 acaacaacga ccacagaatt accctttaac agttaccagc atttgtatac gacgactgcc 1741 tcacccgctg ctgcaatggc cgccgccgcc gatcacttgg ccgcctccaa tggaggagcg 1801 tctgaagcgg ctgcaactgc tgcctcatca tttgatagct ctcatgtggc ctctagtgta 1861 gcctcatttt tctcttcact catctctagc accccatcac ccatcacaac taccaccacc 1921 aacaatccca tcactgtctc ctcctccatg acggacaaag ccaccgagaa ttcatttggc 1981 ctcattaaca atctcatgga aaatagtttc caaacctttt ccggcatctc ccatcccgaa 2041 gccgctagta ttgtgacctt tgaaaattat gaaaatctgg acaacatcta tcccgccgcc 2101 ctatcctcca atgtgggtac cttaaactcc actgcctgtg gtcgtgtgga cattatgggc 2161 accattgtgt acgattcggc tccctatctg tatcccttca tcatagaata ttccctcatt 2221 ggcgccgttg tcctctatgt gatgtggaag catattggac gttatcctgg acgcatgaac 2281 gacgacgact tggaacatcg cctagaggtt atgctctcgc ggcgtgctgt ggccatggcc 2341 cagcaggctc gttctggtcg cgtggactgc gttggctctt cgaaaggttt attctttggt 2401 ctattgttgt tggtgggtgc tttgatatgt ttgatactct tcttcgtctt ggtgcgtcat 2461 cagcagttct cgttgctggc catctatttg gccgatgcca gtcattgtat tttaatggta 2521 tttgccatat tggccataat cataggtttt ataagagtta agaatctgaa attccgctgc 2581 gaggaacaat ccaacttgaa tgacattctc ttgcgcatct ccgctttcgg cctcttcacc 2641 tattccgtat tctctgtgat ctcgggcagc ctcaaagttt tggaacacga acccagcctc 2701 ttggttacca ccaccagcgc cgttgccgtt ctgcaggtca tccttcagtt gttgttcatt 2761 gccgatgttt cccgccgtcg cgtccatttg cccgaacatg atcgcagcaa acccggtcgt 2821 caaattgtca ccttcctttt gatctgcaat gtggccatgt tcgccattta cactttcgat 2881 gctcaaaaag tatacgccaa tcccgtaagt agatatgtgc aattggactt ttatggcttt 2941 gtgccatggg ccatcataca gcgtgtaaca ctgccactgt gcattttcca tcgattccat 3001 agcgctgtaa cactagccga gatctggaag accacctata aagcgcgttt ggagtaaatc 3061 aattaaacac cgatcgaaac atcaccgcca acaccaccac aacaacaaca acaacaaaat 3121 taccacaaca acacaacaaa acaaaaacat tcaattacat ttaaggaaat tttttgggaa 3181 aaaaccaaac caaaccaaca acaaaagcta gtaaagaaga agaaaaaacc gacttttttg 3241 aaggcagaaa aaaaaatatt atcagaaaat gttagtgaat cgtaaaaaca aaactcaata 3301 ttaatgaaaa