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LOCUS XM_013247125 5063 bp mRNA linear INV 02-SEP-2023 (LOC106083856), transcript variant X7, mRNA. ACCESSION XM_013247125 VERSION XM_013247125.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247125.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5063 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5063 /gene="LOC106083856" /note="proton channel OtopLc; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106083856" CDS 1790..4810 /gene="LOC106083856" /codon_start=1 /product="uncharacterized protein LOC106083856 isoform X6" /protein_id="XP_013102579.2" /db_xref="GeneID:106083856" /translation="MQRCPYIHEMRERLLNDQNRESLPLEQMERANLLDNRQSAELQQ VGTIVKLNGDGYHTSPAHQRTPLVPRDLGEDFNLDFDDDFPIEVRRPKNAKTSLFIVT SLVYAIILIVVCIAYVISDVTTHRLPVLYYESFFTYLYGVSILFLLYVFCFLLQESSC CNGGNNQPKSPKKEKKSKKKEKDPADSKDAKGSKDSGKSGKPSPYQALYGKLSTCCKG VAVFVYIVILIALIFHFILVFHWTVSMVVFLILLILHYLLIPKFLRASDTQVDAEVAV TPKNTRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIYIGLEFGSFFEIPFDSPCHHILI GVNPLLQMIFTFMQMYFIFMNARLNIHRFKVIARFGLMHVVATNICVWIRTLVKESLL EITLYHQRRESDPNESSIGQSIRQHALRHAGTVLRTHYGPNEEFEVLDGEDLLPKNAY TTNGALSKMLAKTVDGISKTLGMGSNEIADVVTTTTTTTARPAFTTPSYQWQSTTVAR KLKKFITSTTAAATMGTSPTTTSTTTTTTTTALPITSPLATTTTTELPFNSYQHLYTT TASPAAAMAAAADHLAASNGGASEAAATAASSFDSSHVASSVASFFSSLISSTPSPIT TTTTNNPITVSSSMTDKATENSFGLINNLMENSFQTFSGISHPEAASIVTFENYENLD NIYPAALSSNVGTLNSTACGRVDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHI GRYPGRMNDDDLEHRLEVMLSRRAVAMAQQARSGRVDCVGSSKGLFFGLLLLVGALIC LILFFVLVRHQQFSLLAIYLADASHCILMVFAILAIIIGFIRVKNLKFRCEEQSNLND ILLRISAFGLFTYSVFSVISGSLKVLEHEPSLLVTTTSAVAVLQVILQLLFIADVSRR RVHLPEHDRSKPGRQIVTFLLICNVAMFAIYTFDAQKVYANPVSRYVQLDFYGFVPWA IIQRVTLPLCIFHRFHSAVTLAEIWKTTYKARLE" polyA_site 5063 /gene="LOC106083856" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cggtagttcc aatcagtctg aaacgaattg ttgtgaacga tggaagaaaa taaaaacgtt 61 tgaaaaaaat ttggtgtaga acgttgagac agacatcata gtgaccgttt atttgtgtgt 121 gtagtaaatc aaatcagaat atagagtccg aatcagtggt gtttgctggt gagaattgtg 181 ttgtggcttg gtagtgcaaa aaaggaaata gtgaagtctg ccaggaagtt actaaaagag 241 agagtgaata aatgtgctaa atatttaata aaaaggaatt ggagttacat tgaaaatata 301 gaaaagaaaa acatatcaaa aaagagtttc tgacaaaacc aaagtttata tcaaaattgt 361 tgtaatacta tttaacaaaa aaaaaaaaaa gccccaagtg ccatagttgc cagagaagtc 421 tgcctataaa acaaaagtat tttttgcatc tttaaaacaa aaattaaata aaaaaaacaa 481 aatcctttcg cttttgctga gccatacaaa agtagccata attgactctt taatcaaacc 541 ctaaacaaaa tcaaagtcct ttgtgtctac aaaataacgg ctactcacac ctttgtttgt 601 tcgccaaaga gtaaaagtat caacaaacaa aactaaaaat atactgttaa tcatacacac 661 actcacacac actgtcctgt gtaagcgcat acaaacacag cgtgtctagg atgttcacaa 721 atccatcatc ttcatcatta tcatctctac ctttataact ggatgtcctc accttggcag 781 caggactgac acacagtgtg tttgttgttg ctattcaaag tgaagtacca aaaataaaca 841 acagcaaaaa attgagattt tatagcaaca gtgtttggtg gataggaata gaaagaaata 901 ccaaaacaaa cgcaaacaac aactaccacc ctcataaaag tttgcttgtt aacgaggaga 961 aaaaactgaa ttaaggaaag tagacataaa aaaggataca aaatttcccc ttgtataaaa 1021 ttgtttgcct tgctattaaa tcataagtgt tggcaccttt ccccccctta acgaaatcat 1081 cactgccaaa aattcatatc gaaattggta gtaaattatc gattaaaaaa aaaaaacaac 1141 caaacaacaa cctcgttaaa ttgtttgcaa ttgattgatt gatttcgtgc tggttgatta 1201 aatccaagtg cgtgtgtatg taatcggcta aatttcggtt tgacaataat taagtcatac 1261 ttaagcttga attcatcaac ctaaagtgga tgaaattaat tgtggacttt tttcaagtac 1321 aatacatcaa agtcatcatt gtcgtgctaa agaagctcat cgtgacaacc atataagcga 1381 gactgcctca atctatttgg acaatacaac tctacacacc taagattatt aactggttat 1441 caaaacaata aaattgacca aatttattct ccagcaaagc taaatggaat ttcaacaaaa 1501 tcgactgatt tttgactatt agatatacaa caaataacaa aaagaagatc aaaacaaaaa 1561 aatttatata cacacaaaaa aattgattag gactttttct acaaatccaa aaaaacaaat 1621 aataaaaaaa aaaaaaaaca caaaaccccc attccctcca atatcaaaat cagctttatt 1681 ctataaactc cagggaaatt aaaaacaaac cctttaacac atacaaaaaa agtattatcc 1741 tacagcagca ttattcgatt tccccatccc ctcctgttac cgataaggaa tgcagcgttg 1801 tccctatata catgaaatgc gagaacgttt attgaacgat cagaatcgtg aatcattacc 1861 acttgaacaa atggagcgag caaatctttt ggataacaga cagtcggctg aattacaaca 1921 ggtcgggact atagtcaagc tgaatggcga tggatatcac acaagtccag cccatcaacg 1981 tacgcccctg gtgcctagag atttgggcga agatttcaac ttggatttcg atgatgattt 2041 ccccatagaa gtaagaaggc ctaaaaatgc taagacatcg ctgttcattg taaccagctt 2101 ggtgtatgcc atcattttga ttgtggtttg cattgcttac gttataagtg atgtgacaac 2161 acatcgtttg cccgtgctgt actatgagag cttcttcacc tatttgtacg gagtcagcat 2221 actcttccta ttgtatgtct tctgttttct gttacaggaa agttcctgtt gcaatggcgg 2281 caacaatcaa ccgaaatctc ctaaaaaaga aaagaagtct aaaaagaagg aaaaggatcc 2341 cgccgattcg aaagatgcga aaggttctaa ggattctgga aaaagtggca aacccagtcc 2401 ttatcaggcc ctgtatggaa agctgagcac ttgttgcaaa ggggttgccg tttttgttta 2461 cattgttata ttgattgccc taatcttcca ttttatactg gttttccatt ggactgtctc 2521 aatggtagtt tttcttatac tgttaatact tcactatctc ttgataccga aattcttacg 2581 tgcgtcggac actcaagttg atgctgaagt agctgtaaca cctaaaaata cacgaaaacg 2641 taagacaacc cacagtgatt tgacccatgg cagcttcttt ttgcgagttg gagctattgc 2701 ttttggtctg ggcgccatga tctacattgg tttggagttt ggttcgttct ttgaaatccc 2761 cttcgattct ccctgccatc atatcttgat tggtgtaaat ccattgttgc aaatgatttt 2821 taccttcatg caaatgtact tcatctttat gaatgccaga ttgaatattc accgtttcaa 2881 ggtcattgcc cgttttggcc tcatgcatgt ggtggccact aacatatgtg tctggatacg 2941 caccctggtc aaggaatccc tgcttgaaat tactttgtat catcaacgtc gtgaatccga 3001 tcccaatgag tcttcaatag gtcaatctat acgtcagcat gccttacgtc acgccggcac 3061 tgtgttgcgc acccactatg gacccaatga agagttcgag gtattagatg gtgaagacct 3121 tttgcccaag aatgcctaca ccaccaacgg tgctctatcc aagatgttgg ccaaaacagt 3181 ggatggaatt tcgaaaactt tgggcatggg atccaatgaa attgctgatg tggtgaccac 3241 cactactacc accaccgcaa gaccggcatt taccaccccc agttatcaat ggcaaagcac 3301 tactgtggca cgcaagttga agaagtttat cactagtacc acggcggcgg caaccatggg 3361 tacctccccc actaccacct caacgacgac caccaccacc accacggctt tgccgatcac 3421 ctcaccattg gcgacaacaa cgaccacaga attacccttt aacagttacc agcatttgta 3481 tacgacgact gcctcacccg ctgctgcaat ggccgccgcc gccgatcact tggccgcctc 3541 caatggagga gcgtctgaag cggctgcaac tgctgcctca tcatttgata gctctcatgt 3601 ggcctctagt gtagcctcat ttttctcttc actcatctct agcaccccat cacccatcac 3661 aactaccacc accaacaatc ccatcactgt ctcctcctcc atgacggaca aagccaccga 3721 gaattcattt ggcctcatta acaatctcat ggaaaatagt ttccaaacct tttccggcat 3781 ctcccatccc gaagccgcta gtattgtgac ctttgaaaat tatgaaaatc tggacaacat 3841 ctatcccgcc gccctatcct ccaatgtggg taccttaaac tccactgcct gtggtcgtgt 3901 ggacattatg ggcaccattg tgtacgattc ggctccctat ctgtatccct tcatcataga 3961 atattccctc attggcgccg ttgtcctcta tgtgatgtgg aagcatattg gacgttatcc 4021 tggacgcatg aacgacgacg acttggaaca tcgcctagag gttatgctct cgcggcgtgc 4081 tgtggccatg gcccagcagg ctcgttctgg tcgcgtggac tgcgttggct cttcgaaagg 4141 tttattcttt ggtctattgt tgttggtggg tgctttgata tgtttgatac tcttcttcgt 4201 cttggtgcgt catcagcagt tctcgttgct ggccatctat ttggccgatg ccagtcattg 4261 tattttaatg gtatttgcca tattggccat aatcataggt tttataagag ttaagaatct 4321 gaaattccgc tgcgaggaac aatccaactt gaatgacatt ctcttgcgca tctccgcttt 4381 cggcctcttc acctattccg tattctctgt gatctcgggc agcctcaaag ttttggaaca 4441 cgaacccagc ctcttggtta ccaccaccag cgccgttgcc gttctgcagg tcatccttca 4501 gttgttgttc attgccgatg tttcccgccg tcgcgtccat ttgcccgaac atgatcgcag 4561 caaacccggt cgtcaaattg tcaccttcct tttgatctgc aatgtggcca tgttcgccat 4621 ttacactttc gatgctcaaa aagtatacgc caatcccgta agtagatatg tgcaattgga 4681 cttttatggc tttgtgccat gggccatcat acagcgtgta acactgccac tgtgcatttt 4741 ccatcgattc catagcgctg taacactagc cgagatctgg aagaccacct ataaagcgcg 4801 tttggagtaa atcaattaaa caccgatcga aacatcaccg ccaacaccac cacaacaaca 4861 acaacaacaa aattaccaca acaacacaac aaaacaaaaa cattcaatta catttaagga 4921 aattttttgg gaaaaaacca aaccaaacca acaacaaaag ctagtaaaga agaagaaaaa 4981 accgactttt ttgaaggcag aaaaaaaaat attatcagaa aatgttagtg aatcgtaaaa 5041 acaaaactca atattaatga aaa