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LOCUS XM_013247124 5129 bp mRNA linear INV 02-SEP-2023 (LOC106083856), transcript variant X6, mRNA. ACCESSION XM_013247124 VERSION XM_013247124.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247124.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5129 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5129 /gene="LOC106083856" /note="proton channel OtopLc; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106083856" CDS 1790..4876 /gene="LOC106083856" /codon_start=1 /product="uncharacterized protein LOC106083856 isoform X5" /protein_id="XP_013102578.2" /db_xref="GeneID:106083856" /translation="MQRCPYIHEMRERLLNDQNRESLPLEQMERANLLDNRQSAELQQ VGTIVKLNGDGYHTSPAHQRTPLVPRDLGEDFNLDFDDDFPIEVRRPKNANNNQERKP SSTNLEQVSASPSKRTSLFIVTSLVYAIILIVVCIAYVISDVTTHRLPVLYYESFFTY LYGVSILFLLYVFCFLLQESSCCNGGNNQPKSPKKEKKSKKKEKDPADSKDAKGSKDS GKSGKPSPYQALYGKLSTCCKGVAVFVYIVILIALIFHFILVFHWTVSMVVFLILLIL HYLLIPKFLRASDTQVDAEVAVTPKNTRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIY IGLEFGSFFEIPFDSPCHHILIGVNPLLQMIFTFMQMYFIFMNARLNIHRFKVIARFG LMHVVATNICVWIRTLVKESLLEITLYHQRRESDPNESSIGQSIRQHALRHAGTVLRT HYGPNEEFEVLDGEDLLPKNAYTTNGALSKMLAKTVDGISKTLGMGSNEIADVVTTTT TTTARPAFTTPSYQWQSTTVARKLKKFITSTTAAATMGTSPTTTSTTTTTTTTALPIT SPLATTTTTELPFNSYQHLYTTTASPAAAMAAAADHLAASNGGASEAAATAASSFDSS HVASSVASFFSSLISSTPSPITTTTTNNPITVSSSMTDKATENSFGLINNLMENSFQT FSGISHPEAASIVTFENYENLDNIYPAALSSNVGTLNSTACGRVDIMGTIVYDSAPYL YPFIIEYSLIGAVVLYVMWKHIGRYPGRMNDDDLEHRLEVMLSRRAVAMAQQARSGRV DCVGSSKGLFFGLLLLVGALICLILFFVLVRHQQFSLLAIYLADASHCILMVFAILAI IIGFIRVKNLKFRCEEQSNLNDILLRISAFGLFTYSVFSVISGSLKVLEHEPSLLVTT TSAVAVLQVILQLLFIADVSRRRVHLPEHDRSKPGRQIVTFLLICNVAMFAIYTFDAQ KVYANPVSRYVQLDFYGFVPWAIIQRVTLPLCIFHRFHSAVTLAEIWKTTYKARLE" polyA_site 5129 /gene="LOC106083856" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cggtagttcc aatcagtctg aaacgaattg ttgtgaacga tggaagaaaa taaaaacgtt 61 tgaaaaaaat ttggtgtaga acgttgagac agacatcata gtgaccgttt atttgtgtgt 121 gtagtaaatc aaatcagaat atagagtccg aatcagtggt gtttgctggt gagaattgtg 181 ttgtggcttg gtagtgcaaa aaaggaaata gtgaagtctg ccaggaagtt actaaaagag 241 agagtgaata aatgtgctaa atatttaata aaaaggaatt ggagttacat tgaaaatata 301 gaaaagaaaa acatatcaaa aaagagtttc tgacaaaacc aaagtttata tcaaaattgt 361 tgtaatacta tttaacaaaa aaaaaaaaaa gccccaagtg ccatagttgc cagagaagtc 421 tgcctataaa acaaaagtat tttttgcatc tttaaaacaa aaattaaata aaaaaaacaa 481 aatcctttcg cttttgctga gccatacaaa agtagccata attgactctt taatcaaacc 541 ctaaacaaaa tcaaagtcct ttgtgtctac aaaataacgg ctactcacac ctttgtttgt 601 tcgccaaaga gtaaaagtat caacaaacaa aactaaaaat atactgttaa tcatacacac 661 actcacacac actgtcctgt gtaagcgcat acaaacacag cgtgtctagg atgttcacaa 721 atccatcatc ttcatcatta tcatctctac ctttataact ggatgtcctc accttggcag 781 caggactgac acacagtgtg tttgttgttg ctattcaaag tgaagtacca aaaataaaca 841 acagcaaaaa attgagattt tatagcaaca gtgtttggtg gataggaata gaaagaaata 901 ccaaaacaaa cgcaaacaac aactaccacc ctcataaaag tttgcttgtt aacgaggaga 961 aaaaactgaa ttaaggaaag tagacataaa aaaggataca aaatttcccc ttgtataaaa 1021 ttgtttgcct tgctattaaa tcataagtgt tggcaccttt ccccccctta acgaaatcat 1081 cactgccaaa aattcatatc gaaattggta gtaaattatc gattaaaaaa aaaaaacaac 1141 caaacaacaa cctcgttaaa ttgtttgcaa ttgattgatt gatttcgtgc tggttgatta 1201 aatccaagtg cgtgtgtatg taatcggcta aatttcggtt tgacaataat taagtcatac 1261 ttaagcttga attcatcaac ctaaagtgga tgaaattaat tgtggacttt tttcaagtac 1321 aatacatcaa agtcatcatt gtcgtgctaa agaagctcat cgtgacaacc atataagcga 1381 gactgcctca atctatttgg acaatacaac tctacacacc taagattatt aactggttat 1441 caaaacaata aaattgacca aatttattct ccagcaaagc taaatggaat ttcaacaaaa 1501 tcgactgatt tttgactatt agatatacaa caaataacaa aaagaagatc aaaacaaaaa 1561 aatttatata cacacaaaaa aattgattag gactttttct acaaatccaa aaaaacaaat 1621 aataaaaaaa aaaaaaaaca caaaaccccc attccctcca atatcaaaat cagctttatt 1681 ctataaactc cagggaaatt aaaaacaaac cctttaacac atacaaaaaa agtattatcc 1741 tacagcagca ttattcgatt tccccatccc ctcctgttac cgataaggaa tgcagcgttg 1801 tccctatata catgaaatgc gagaacgttt attgaacgat cagaatcgtg aatcattacc 1861 acttgaacaa atggagcgag caaatctttt ggataacaga cagtcggctg aattacaaca 1921 ggtcgggact atagtcaagc tgaatggcga tggatatcac acaagtccag cccatcaacg 1981 tacgcccctg gtgcctagag atttgggcga agatttcaac ttggatttcg atgatgattt 2041 ccccatagaa gtaagaaggc ctaaaaatgc taataacaac caagaaagaa aaccatccag 2101 cacgaatctg gaacaagttt cggcatcacc atcgaaaagg acatcgctgt tcattgtaac 2161 cagcttggtg tatgccatca ttttgattgt ggtttgcatt gcttacgtta taagtgatgt 2221 gacaacacat cgtttgcccg tgctgtacta tgagagcttc ttcacctatt tgtacggagt 2281 cagcatactc ttcctattgt atgtcttctg ttttctgtta caggaaagtt cctgttgcaa 2341 tggcggcaac aatcaaccga aatctcctaa aaaagaaaag aagtctaaaa agaaggaaaa 2401 ggatcccgcc gattcgaaag atgcgaaagg ttctaaggat tctggaaaaa gtggcaaacc 2461 cagtccttat caggccctgt atggaaagct gagcacttgt tgcaaagggg ttgccgtttt 2521 tgtttacatt gttatattga ttgccctaat cttccatttt atactggttt tccattggac 2581 tgtctcaatg gtagtttttc ttatactgtt aatacttcac tatctcttga taccgaaatt 2641 cttacgtgcg tcggacactc aagttgatgc tgaagtagct gtaacaccta aaaatacacg 2701 aaaacgtaag acaacccaca gtgatttgac ccatggcagc ttctttttgc gagttggagc 2761 tattgctttt ggtctgggcg ccatgatcta cattggtttg gagtttggtt cgttctttga 2821 aatccccttc gattctccct gccatcatat cttgattggt gtaaatccat tgttgcaaat 2881 gatttttacc ttcatgcaaa tgtacttcat ctttatgaat gccagattga atattcaccg 2941 tttcaaggtc attgcccgtt ttggcctcat gcatgtggtg gccactaaca tatgtgtctg 3001 gatacgcacc ctggtcaagg aatccctgct tgaaattact ttgtatcatc aacgtcgtga 3061 atccgatccc aatgagtctt caataggtca atctatacgt cagcatgcct tacgtcacgc 3121 cggcactgtg ttgcgcaccc actatggacc caatgaagag ttcgaggtat tagatggtga 3181 agaccttttg cccaagaatg cctacaccac caacggtgct ctatccaaga tgttggccaa 3241 aacagtggat ggaatttcga aaactttggg catgggatcc aatgaaattg ctgatgtggt 3301 gaccaccact actaccacca ccgcaagacc ggcatttacc acccccagtt atcaatggca 3361 aagcactact gtggcacgca agttgaagaa gtttatcact agtaccacgg cggcggcaac 3421 catgggtacc tcccccacta ccacctcaac gacgaccacc accaccacca cggctttgcc 3481 gatcacctca ccattggcga caacaacgac cacagaatta ccctttaaca gttaccagca 3541 tttgtatacg acgactgcct cacccgctgc tgcaatggcc gccgccgccg atcacttggc 3601 cgcctccaat ggaggagcgt ctgaagcggc tgcaactgct gcctcatcat ttgatagctc 3661 tcatgtggcc tctagtgtag cctcattttt ctcttcactc atctctagca ccccatcacc 3721 catcacaact accaccacca acaatcccat cactgtctcc tcctccatga cggacaaagc 3781 caccgagaat tcatttggcc tcattaacaa tctcatggaa aatagtttcc aaaccttttc 3841 cggcatctcc catcccgaag ccgctagtat tgtgaccttt gaaaattatg aaaatctgga 3901 caacatctat cccgccgccc tatcctccaa tgtgggtacc ttaaactcca ctgcctgtgg 3961 tcgtgtggac attatgggca ccattgtgta cgattcggct ccctatctgt atcccttcat 4021 catagaatat tccctcattg gcgccgttgt cctctatgtg atgtggaagc atattggacg 4081 ttatcctgga cgcatgaacg acgacgactt ggaacatcgc ctagaggtta tgctctcgcg 4141 gcgtgctgtg gccatggccc agcaggctcg ttctggtcgc gtggactgcg ttggctcttc 4201 gaaaggttta ttctttggtc tattgttgtt ggtgggtgct ttgatatgtt tgatactctt 4261 cttcgtcttg gtgcgtcatc agcagttctc gttgctggcc atctatttgg ccgatgccag 4321 tcattgtatt ttaatggtat ttgccatatt ggccataatc ataggtttta taagagttaa 4381 gaatctgaaa ttccgctgcg aggaacaatc caacttgaat gacattctct tgcgcatctc 4441 cgctttcggc ctcttcacct attccgtatt ctctgtgatc tcgggcagcc tcaaagtttt 4501 ggaacacgaa cccagcctct tggttaccac caccagcgcc gttgccgttc tgcaggtcat 4561 ccttcagttg ttgttcattg ccgatgtttc ccgccgtcgc gtccatttgc ccgaacatga 4621 tcgcagcaaa cccggtcgtc aaattgtcac cttccttttg atctgcaatg tggccatgtt 4681 cgccatttac actttcgatg ctcaaaaagt atacgccaat cccgtaagta gatatgtgca 4741 attggacttt tatggctttg tgccatgggc catcatacag cgtgtaacac tgccactgtg 4801 cattttccat cgattccata gcgctgtaac actagccgag atctggaaga ccacctataa 4861 agcgcgtttg gagtaaatca attaaacacc gatcgaaaca tcaccgccaa caccaccaca 4921 acaacaacaa caacaaaatt accacaacaa cacaacaaaa caaaaacatt caattacatt 4981 taaggaaatt ttttgggaaa aaaccaaacc aaaccaacaa caaaagctag taaagaagaa 5041 gaaaaaaccg acttttttga aggcagaaaa aaaaatatta tcagaaaatg ttagtgaatc 5101 gtaaaaacaa aactcaatat taatgaaaa