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LOCUS XM_013247119 5208 bp mRNA linear INV 02-SEP-2023 (LOC106083856), transcript variant X2, mRNA. ACCESSION XM_013247119 VERSION XM_013247119.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013247119.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5208 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5208 /gene="LOC106083856" /note="proton channel OtopLc; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106083856" CDS 1824..4955 /gene="LOC106083856" /codon_start=1 /product="uncharacterized protein LOC106083856 isoform X1" /protein_id="XP_013102573.2" /db_xref="GeneID:106083856" /translation="MQRCPYIHEMRERLLNDQNRESLPLEQMERANLLDNRQSAELQQ VGTIVKLNGDGYHTSPAHQRTPLVPRDLGEDFNLDFDDDFPIEVRRPKNAKVVYSLKP NSNNRSYLPANITVHGTYHTNIITGPIELWTSLFIVTSLVYAIILIVVCIAYVISDVT THRLPVLYYESFFTYLYGVSILFLLYVFCFLLQESSCCNGGNNQPKSPKKEKKSKKKE KDPADSKDAKGSKDSGKSGKPSPYQALYGKLSTCCKGVAVFVYIVILIALIFHFILVF HWTVSMVVFLILLILHYLLIPKFLRASDTQVDAEVAVTPKNTRKRKTTHSDLTHGSFF LRVGAIAFGLGAMIYIGLEFGSFFEIPFDSPCHHILIGVNPLLQMIFTFMQMYFIFMN ARLNIHRFKVIARFGLMHVVATNICVWIRTLVKESLLEITLYHQRRESDPNESSIGQS IRQHALRHAGTVLRTHYGPNEEFEVLDGEDLLPKNAYTTNGALSKMLAKTVDGISKTL GMGSNEIADVVTTTTTTTARPAFTTPSYQWQSTTVARKLKKFITSTTAAATMGTSPTT TSTTTTTTTTALPITSPLATTTTTELPFNSYQHLYTTTASPAAAMAAAADHLAASNGG ASEAAATAASSFDSSHVASSVASFFSSLISSTPSPITTTTTNNPITVSSSMTDKATEN SFGLINNLMENSFQTFSGISHPEAASIVTFENYENLDNIYPAALSSNVGTLNSTACGR VDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGRYPGRMNDDDLEHRLEVMLS RRAVAMAQQARSGRVDCVGSSKGLFFGLLLLVGALICLILFFVLVRHQQFSLLAIYLA DASHCILMVFAILAIIIGFIRVKNLKFRCEEQSNLNDILLRISAFGLFTYSVFSVISG SLKVLEHEPSLLVTTTSAVAVLQVILQLLFIADVSRRRVHLPEHDRSKPGRQIVTFLL ICNVAMFAIYTFDAQKVYANPVSRYVQLDFYGFVPWAIIQRVTLPLCIFHRFHSAVTL AEIWKTTYKARLE" polyA_site 5208 /gene="LOC106083856" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cggtagttcc aatcagtctg aaacgaattg ttgtgaacga tggaagaaaa taaaaacgtt 61 tgaaaaaaat ttggtgtaga acgttgagac agacatcata gtgaccgttt atttgtgtgt 121 gtagtaaatc aaatcagaat atagagtccg aatcagtggt gtttgctggt gagaattgtg 181 ttgtggcttg gtagtgcaaa aaaggaaata gtgaagtctg ccaggaagtt actaaaagag 241 agagtgaata aatgtgctaa atatttaata aaaaggaatt ggagttacat tgaaaatata 301 gaaaagaaaa acatatcaaa aaagagtttc tgacaaaacc aaagtttata tcaaaattgt 361 tgtaatacta tttaacaaaa aaaaaaaaaa gccccaagtg ccatagttgc cagagaagtc 421 tgcctataaa acaaaagtat tttttgcatc tttaaaacaa aaattaaata aaaaaaacaa 481 aatcctttcg cttttgctga gccatacaaa agtagccata attgactctt taatcaaacc 541 ctaaacaaaa tcaaagtcct ttgtgtctac aaaataacgg ctactcacac ctttgtttgt 601 tcgccaaaga gtaaaagtat caacaaacaa aactaaaaat atactgttaa tcatacacac 661 actcacacac actgtcctgt gtaagcgcat acaaacacag cgtgtctagg atgttcacaa 721 atccatcatc ttcatcatta tcatctctac ctttataact ggatgtcctc accttggcag 781 caggactgac acacagtgtg tttgttgttg ctattcaaag tgaagtacca aaaataaaca 841 acagcaaaaa attgagattt tatagcaaca gtgtttggtg gataggaata gaaagaaata 901 ccaaaacaaa cgcaaacaac aactaccacc ctcataaaag tttgcttgtt aacgaggaga 961 aaaaactgaa ttaaggaaag tagacataaa aaaggataca aaatttcccc ttgtataaaa 1021 ttgtttgcct tgctattaaa tcataagtgt tggcaccttt ccccccctta acgaaatcat 1081 cactgccaaa aattcatatc gaaattggta gtaaattatc gattaaaaaa aaaaaacaac 1141 caaacaacaa cctcgttaaa ttgtttgcaa ttgattgatt gatttcgtgc tggttgatta 1201 aatccaagtg cgtgtgtatg taatcggcta aatttcggtt tgacaataat taagtcatac 1261 ttaagcttga attcatcaac ctaaagtgga tgaaattaat tgtggacttt tttcaagtac 1321 aatacatcaa agtcatcatt gtcgtgctaa agaagctcat cgtgacaacc atataagcga 1381 gactgcctca atctatttgg acaatacaac tctacacacc taagattatt aactggttat 1441 caaaacaata aagtatgttg ttcaacttat tgacactata aatatcattg accaaattta 1501 ttctccagca aagctaaatg gaatttcaac aaaatcgact gatttttgac tattagatat 1561 acaacaaata acaaaaagaa gatcaaaaca aaaaaattta tatacacaca aaaaaattga 1621 ttaggacttt ttctacaaat ccaaaaaaac aaataataaa aaaaaaaaaa aacacaaaac 1681 ccccattccc tccaatatca aaatcagctt tattctataa actccaggga aattaaaaac 1741 aaacccttta acacatacaa aaaaagtatt atcctacagc agcattattc gatttcccca 1801 tcccctcctg ttaccgataa ggaatgcagc gttgtcccta tatacatgaa atgcgagaac 1861 gtttattgaa cgatcagaat cgtgaatcat taccacttga acaaatggag cgagcaaatc 1921 ttttggataa cagacagtcg gctgaattac aacaggtcgg gactatagtc aagctgaatg 1981 gcgatggata tcacacaagt ccagcccatc aacgtacgcc cctggtgcct agagatttgg 2041 gcgaagattt caacttggat ttcgatgatg atttccccat agaagtaaga aggcctaaaa 2101 atgctaaggt cgtttattca ctaaaaccaa attcgaataa tcgcagttat ttaccggcga 2161 atataaccgt acatggcaca tatcacacca atatcataac cggaccaatt gaattatgga 2221 catcgctgtt cattgtaacc agcttggtgt atgccatcat tttgattgtg gtttgcattg 2281 cttacgttat aagtgatgtg acaacacatc gtttgcccgt gctgtactat gagagcttct 2341 tcacctattt gtacggagtc agcatactct tcctattgta tgtcttctgt tttctgttac 2401 aggaaagttc ctgttgcaat ggcggcaaca atcaaccgaa atctcctaaa aaagaaaaga 2461 agtctaaaaa gaaggaaaag gatcccgccg attcgaaaga tgcgaaaggt tctaaggatt 2521 ctggaaaaag tggcaaaccc agtccttatc aggccctgta tggaaagctg agcacttgtt 2581 gcaaaggggt tgccgttttt gtttacattg ttatattgat tgccctaatc ttccatttta 2641 tactggtttt ccattggact gtctcaatgg tagtttttct tatactgtta atacttcact 2701 atctcttgat accgaaattc ttacgtgcgt cggacactca agttgatgct gaagtagctg 2761 taacacctaa aaatacacga aaacgtaaga caacccacag tgatttgacc catggcagct 2821 tctttttgcg agttggagct attgcttttg gtctgggcgc catgatctac attggtttgg 2881 agtttggttc gttctttgaa atccccttcg attctccctg ccatcatatc ttgattggtg 2941 taaatccatt gttgcaaatg atttttacct tcatgcaaat gtacttcatc tttatgaatg 3001 ccagattgaa tattcaccgt ttcaaggtca ttgcccgttt tggcctcatg catgtggtgg 3061 ccactaacat atgtgtctgg atacgcaccc tggtcaagga atccctgctt gaaattactt 3121 tgtatcatca acgtcgtgaa tccgatccca atgagtcttc aataggtcaa tctatacgtc 3181 agcatgcctt acgtcacgcc ggcactgtgt tgcgcaccca ctatggaccc aatgaagagt 3241 tcgaggtatt agatggtgaa gaccttttgc ccaagaatgc ctacaccacc aacggtgctc 3301 tatccaagat gttggccaaa acagtggatg gaatttcgaa aactttgggc atgggatcca 3361 atgaaattgc tgatgtggtg accaccacta ctaccaccac cgcaagaccg gcatttacca 3421 cccccagtta tcaatggcaa agcactactg tggcacgcaa gttgaagaag tttatcacta 3481 gtaccacggc ggcggcaacc atgggtacct cccccactac cacctcaacg acgaccacca 3541 ccaccaccac ggctttgccg atcacctcac cattggcgac aacaacgacc acagaattac 3601 cctttaacag ttaccagcat ttgtatacga cgactgcctc acccgctgct gcaatggccg 3661 ccgccgccga tcacttggcc gcctccaatg gaggagcgtc tgaagcggct gcaactgctg 3721 cctcatcatt tgatagctct catgtggcct ctagtgtagc ctcatttttc tcttcactca 3781 tctctagcac cccatcaccc atcacaacta ccaccaccaa caatcccatc actgtctcct 3841 cctccatgac ggacaaagcc accgagaatt catttggcct cattaacaat ctcatggaaa 3901 atagtttcca aaccttttcc ggcatctccc atcccgaagc cgctagtatt gtgacctttg 3961 aaaattatga aaatctggac aacatctatc ccgccgccct atcctccaat gtgggtacct 4021 taaactccac tgcctgtggt cgtgtggaca ttatgggcac cattgtgtac gattcggctc 4081 cctatctgta tcccttcatc atagaatatt ccctcattgg cgccgttgtc ctctatgtga 4141 tgtggaagca tattggacgt tatcctggac gcatgaacga cgacgacttg gaacatcgcc 4201 tagaggttat gctctcgcgg cgtgctgtgg ccatggccca gcaggctcgt tctggtcgcg 4261 tggactgcgt tggctcttcg aaaggtttat tctttggtct attgttgttg gtgggtgctt 4321 tgatatgttt gatactcttc ttcgtcttgg tgcgtcatca gcagttctcg ttgctggcca 4381 tctatttggc cgatgccagt cattgtattt taatggtatt tgccatattg gccataatca 4441 taggttttat aagagttaag aatctgaaat tccgctgcga ggaacaatcc aacttgaatg 4501 acattctctt gcgcatctcc gctttcggcc tcttcaccta ttccgtattc tctgtgatct 4561 cgggcagcct caaagttttg gaacacgaac ccagcctctt ggttaccacc accagcgccg 4621 ttgccgttct gcaggtcatc cttcagttgt tgttcattgc cgatgtttcc cgccgtcgcg 4681 tccatttgcc cgaacatgat cgcagcaaac ccggtcgtca aattgtcacc ttccttttga 4741 tctgcaatgt ggccatgttc gccatttaca ctttcgatgc tcaaaaagta tacgccaatc 4801 ccgtaagtag atatgtgcaa ttggactttt atggctttgt gccatgggcc atcatacagc 4861 gtgtaacact gccactgtgc attttccatc gattccatag cgctgtaaca ctagccgaga 4921 tctggaagac cacctataaa gcgcgtttgg agtaaatcaa ttaaacaccg atcgaaacat 4981 caccgccaac accaccacaa caacaacaac aacaaaatta ccacaacaac acaacaaaac 5041 aaaaacattc aattacattt aaggaaattt tttgggaaaa aaccaaacca aaccaacaac 5101 aaaagctagt aaagaagaag aaaaaaccga cttttttgaa ggcagaaaaa aaaatattat 5161 cagaaaatgt tagtgaatcg taaaaacaaa actcaatatt aatgaaaa