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LOCUS XM_013246678 2514 bp mRNA linear INV 02-SEP-2023 (LOC106083568), transcript variant X1, mRNA. ACCESSION XM_013246678 VERSION XM_013246678.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013246678.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2514 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2514 /gene="LOC106083568" /note="plexin domain-containing protein 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106083568" CDS 260..2110 /gene="LOC106083568" /codon_start=1 /product="plexin domain-containing protein 1 isoform X1" /protein_id="XP_013102132.2" /db_xref="GeneID:106083568" /translation="MAKVGAGFVGILTFCLVINNLSICATNPIEENDKKSIVDIKTQY QSVQTTNSSSAQAQPSVNVTASAASTDTAASSSSATSSVIVPSSSRPLLGVNGTGQRK DMTDKSPIAAATTVQPDLIKGSDSATATDAKKNANQFPKKVLTTTKTAATSLLAAAAA PVATAASPAAAISTNSTDKSDLEKLIDSIDLPEDETLDSLKKRNLTLNTTSDHHQYYN STTYTDKEKADKYWNEIKNITPNVMLSQSHRRAMTVLLSFDFPFYGHPVRNVTIATGG FIYTGDYVHSWLAATQYIAPLMANFDTSLSNDSFVRLNDTGSSFTVVWENVSLQDKQD VGKFTFSTTLHKNGDIVFTYFSVPILIPAIQDDKHPVKVGLSDAYIMDQDVGNARRKT IYEYHRVSFGNAQITNSTTIYFTALPTCLQYTDCASCLNHDTDFSCFWCPSANRCSTG TDRKRQEWKSLSCDRFQITNASTCPAIGHEGNNYSDGNTNNNHKDVTTHPFKPYNPSG LESSTVTTVDGGNSEYQYNGTPMKSATGTQMKSVANEAEPTQKMSLTLGIFIPICLVS CVLLWVLYAYRNPHTKSGQLLIQSKYRQYRPSQWSWRRGEARYTAATIHM" polyA_site 2514 /gene="LOC106083568" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 catcgattca ttcgacgatg atgatcaaac atattggata gacttaataa cgtaataaga 61 agtgaagtcg gtgtggtgtt tttacggaaa aatctcggtc ctccttgaac ccattattcc 121 attattttgc gtaaaaatcg gacaaaaagc tatccgcaaa ccctcgcgag cgagtctgta 181 taatcgtgtt ttgggagacg acttaaaaaa aaaaatactt tccgagattg ttggttcatt 241 aattctaaaa acttaaaaaa tggcgaaagt cggtgctggt tttgtcggaa ttttaacatt 301 ttgtcttgta attaacaact taagtatatg tgcaacaaat ccaattgaag aaaatgacaa 361 aaaatccata gtagatatta aaactcaata ccaaagtgtt caaaccacaa actcaagtag 421 tgctcaagcc caaccaagtg ttaatgtcac cgcttccgct gcatccactg acacagcagc 481 atccagctca tcagccacat catccgttat agtgccttcc agtagtcgtc ctttattggg 541 tgttaatgga actggtcaac gtaaggatat gacggataaa agtccgattg cggctgcaac 601 cacagttcaa ccggatctta tcaagggcag tgattcagcg actgctacag atgcaaaaaa 661 gaatgcaaat caatttccta agaaggtgct gacaactaca aaaacagctg caacatccct 721 tttggctgct gctgctgcac cagttgccac cgctgcctcg cctgcggcag caatatcaac 781 aaatagtacg gacaaatctg atttggaaaa attgattgat tccattgatt tgccagagga 841 tgagacattg gactcattga agaaacgtaa cctaacactg aatacaacat cggaccatca 901 tcaatattac aatagcacga catatacaga caaagaaaaa gccgataaat actggaatga 961 aataaaaaat attacaccca acgttatgct atcacaatca catcgtcgag ccatgaccgt 1021 attattaagt ttcgatttcc ccttctacgg ccatcctgtg agaaatgtga cgatagccac 1081 tggcggtttt atatacactg gtgattatgt acactcttgg ttggcagcca cgcaatatat 1141 tgctccattg atggccaatt ttgatacaag tctctcgaat gactcatttg tacgtcttaa 1201 tgatacaggt tcatcgttta ccgtcgtctg ggaaaatgtt tctctacaag acaaacaaga 1261 tgttggtaaa ttcaccttta gtacgactct gcacaaaaat ggcgatatcg tgttcaccta 1321 cttttcggta ccgattctca ttccggccat acaagacgat aaacatcccg ttaaggttgg 1381 actctcagat gcctatatta tggatcaaga tgttggcaat gctcgtagaa aaaccattta 1441 tgaatatcat cgtgtcagtt ttggcaacgc acagattacc aattcaacaa ctatctattt 1501 cactgcattg ccaacgtgtc tgcaatatac cgactgtgcc tcctgtttga atcatgacac 1561 cgacttctca tgcttctggt gtccttctgc aaacagatgt tccactggca cagatcgcaa 1621 gcgacaagaa tggaaatccc tttcctgcga tcgcttccaa ataaccaatg catccacctg 1681 tccggccatt ggtcatgagg gcaacaacta ctctgatggt aacaccaata acaatcataa 1741 agatgttaca acacatccat ttaaaccata taatccctct ggtttagaat catcaaccgt 1801 taccacagtg gacggcggaa attctgagta tcaatacaat ggtacaccaa tgaaaagcgc 1861 aacaggcaca caaatgaaat cagtggccaa tgaggcggaa ccaacgcaaa aaatgagttt 1921 aactctggga atctttatac ccatttgttt ggtctcctgc gtcttgttgt gggtgttgta 1981 tgcctatcgg aatccacaca cgaaaagtgg acaattgctt atacagtcca aatatcgtca 2041 gtatcgtccc agccaatggt cgtggcgacg cggagaagct cgttatactg ctgcaacgat 2101 acatatgtag acaattaaaa caatttaatt tagactttct ctcgatcttg tacttttttt 2161 tttaaatcaa ccaagaccaa acctcttttg caatatttcc ccatttttgt ttccggcaca 2221 tggtgtgtct tcttgtgttt tatatatctt ctaggactcg tatgttgtta tccttcaact 2281 ttttgtgctt tctttagtgg aattttgtaa gaatataatt aaataaaagc ggaaaaaaga 2341 aagaatgaaa aaagaaacta aaccaatgtg atctcgttcc caatctcaat gacagtaact 2401 ctacgttgcc tcaaatgcat caccttcaaa cagaattatc cttaatatgt gagtaatgaa 2461 agatataatc aatttaattg attcgtcaga agtttttcca aactattctt aaaa