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LOCUS XM_013246665 3003 bp mRNA linear INV 02-SEP-2023 transcript variant X4, mRNA. ACCESSION XM_013246665 VERSION XM_013246665.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013246665.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3003 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3003 /gene="LOC106083564" /note="REST corepressor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins" /db_xref="GeneID:106083564" CDS 307..2403 /gene="LOC106083564" /codon_start=1 /product="REST corepressor isoform X1" /protein_id="XP_013102119.1" /db_xref="GeneID:106083564" /translation="MVLAERNSELVRNGRRSRGPSPNGHGASSGSASASAPGGTGTGT PETSSDDDNSIKRNGKSKTKQSEYEEKIRVGRDYQAVCPPLIPEPERKPECLNDRALL VWSPTKEIPDTKLEEYISVAKEKYGYNGEQALGMLFWHKHDLERAVMDLANFTPFPDE WTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRHRQSVMDRQEKV KASKEGSSENGSDNGSNEESDNDDKDQTLSSHAGLLYDQTNDSHDGGGGAGVDIENHF LNTNTNTNNNNNNNNISNNKQQPQQQQQQLQTPSISNSDTIYSNGISTCTNAAANSSN SVNNNNNAAILSSVGSVGGGGYCSNCGVACNILHNSPHGKLCSSCHHHWRRTGNKRPT SGPFFGKRSRDRNAERHKRKPPRGMYINHDDIVALASANDNQDELLANIDREIVSLLS QVQLNKQNISSLKRKNSDNLEEIRPTENANRINARWTNDEIHLAVQGVKKYGRDFQAI AETLGTKTEAHVRNFYLNQRRRYNLDQIIKKHEAEKEAAAGSVALSANAASNSNSNSA ASSASNSAPAANSSVSADLPNNTPNSIIKDEVPTVPAQQPTKKKDIPNSVNEESDNTT SSETAISKSTISTVTTTSDERKSESSLSASNLQKDNVIMEIDLDADQPDVTQPPPAKK IALSVATQEFPKSSPA" misc_feature 520..678 /gene="LOC106083564" /note="ELM2 domain; Region: ELM2; pfam01448" /db_xref="CDD:460214" misc_feature 784..918 /gene="LOC106083564" /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is...; Region: SANT; cl21498" /db_xref="CDD:473887" misc_feature order(787..789,874..879,883..888,892..900,904..912) /gene="LOC106083564" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:212559" misc_feature 1759..1890 /gene="LOC106083564" /note="Myb-like DNA-binding domain; Region: Myb_DNA-binding; pfam00249" /db_xref="CDD:459731" ORIGIN 1 gtggcgttta tttgaaacat agcttgctgc gttgcaaatg ctggctgaat ttcttaatat 61 tctcattttc attcagtctt ctcttgatct gtgcgtgtta agttgtattc taataactgg 121 aaggaattta ggaagagaac agtgaaaatt taaaacattc aatattttgt tttaatacgt 181 tcctcattga ttggttggat tgacttggtg tatcttgttt actttgcttt tcgctgctgc 241 agcgtgattc attattgctt aaggaaaagt gacgacgata aatttgaaat tattaacaaa 301 caaaaaatgg tactggccga gcggaattca gagttagtgc gcaatggcag acgctctcga 361 ggtcccagtc ccaatggcca tggtgcaagt tcgggaagtg ccagcgcaag tgcaccaggc 421 ggaacgggta ctggcactcc cgaaacatca tctgatgatg acaattctat taaacggaat 481 ggaaaatcta aaactaaaca aagcgagtat gaagaaaaaa tccgtgtcgg tcgagactat 541 caagcggtgt gtcccccttt aatacctgag cccgaaagaa aacctgaatg ccttaatgat 601 cgcgctttgc tagtgtggtc acctacaaaa gaaataccag atactaaact tgaggaatat 661 atatcagttg ccaaagagaa atatggttat aatggtgaac aagctttggg tatgttattc 721 tggcataaac acgatttgga gagagctgtt atggatttgg caaactttac acccttccct 781 gatgaatgga cagtggaaga caaagttttg tttgaacaag catttcaatt ccatggcaaa 841 agttttcatc gcatacgtca aatgttgcca gataaatcca ttgctagctt agtaaaatac 901 tattactcat ggaaaaagac acgacatcgt caaagtgtta tggatcgtca ggagaaagta 961 aaagccagca aagaaggttc ttcagagaat ggcagtgata atggaagcaa tgaagaatcc 1021 gacaatgatg acaaggatca gacattatca tcacatgcag gattgttata tgatcaaaca 1081 aatgattcgc atgatggtgg tggtggtgct ggtgttgaca ttgaaaatca ttttttaaat 1141 accaatacca acaccaacaa caataataac aataacaaca tcagcaacaa taaacaacaa 1201 ccgcaacaac aacaacaaca actccaaaca ccgtccatat caaattccga cacaatttat 1261 tcaaatggaa tttccacttg cacaaatgcc gccgccaata gcagcaatag tgtcaataac 1321 aataataatg ccgccatcct ctcttctgtt ggcagcgttg gtggtggtgg ttattgttca 1381 aattgtggcg ttgcctgcaa tattttgcat aactctcccc atggcaaatt atgttccagt 1441 tgccatcacc attggagacg cactggcaat aaacgtccca catctggacc attttttggc 1501 aaaaggtcac gagatcgcaa tgccgagcga cataagcgca aaccaccccg tggcatgtat 1561 ataaatcatg acgatattgt ggcattggcc agtgcaaatg acaatcaaga tgagttgcta 1621 gccaatattg atcgtgaaat tgtatccctt ttgagtcaag tacaactgaa taagcaaaat 1681 atctcatctt taaagcgtaa aaattccgat aatttggaag aaataaggcc aacagaaaat 1741 gccaatcgca ttaatgcacg ttggacaaac gatgaaattc acttggccgt tcaaggtgtg 1801 aaaaaatatg gtagagattt tcaggcaatt gccgaaacct tgggcactaa aacagaagct 1861 catgtacgaa atttttattt gaatcaacgt cgtcgttata atttggatca gattattaaa 1921 aagcatgaag ctgaaaaaga agctgctgct ggcagcgtag ctttaagtgc caatgctgct 1981 agtaattcga acagtaattc ggcagcttca agtgcttcca atagtgctcc tgctgcaaac 2041 tccagtgtca gtgcagattt acctaataac actccaaact caatcataaa agatgaagtt 2101 cccactgttc cggcacagca gccaactaaa aagaaggaca taccaaatag cgtcaatgaa 2161 gaatctgata atacaacatc aagtgagacg gccatttcga aatcaacaat ttctacagtc 2221 accacaactt cagatgaacg caaaagcgaa agcagtttaa gtgctagcaa cttgcagaaa 2281 gataatgtca tcatggagat tgatttagat gctgaccagc cagatgtaac acaaccgccg 2341 ccagccaaaa agattgcttt gagtgttgca actcaggaat ttccaaaatc cagccctgct 2401 taaataataa gaattttatg aaacatctaa cgtttcaaca attatgcgcg taatataaaa 2461 caaaaaaaaa gcaactacag ggttgaaagc aaaagaaatg ggtcttagca tttctaagag 2521 aaaaaaggat aagcgaggaa aaatttttac tcaagccacc ttttgcctac gttaagaaaa 2581 atggagcaat acaaaacgat gcagtagatc tgcattttag tagacgggat gataaacaaa 2641 ttaatatggt tggccatata tctcttatgt actttttttt aaattttatt tggactatat 2701 aaatgtccga tgtgttctta taatattcta taattttcgg aatgacttac tgactaattt 2761 taatttgttt tttccttttt gttttgttat aattagatat atatatgata attaaatata 2821 catacatgca tatataagag tgcaaaaact aaaatgaata atcttgtatt ttctattcaa 2881 gctctaagaa aagtatttcg gcaatttcca attaaaaaac aattaaagaa ctcaatttaa 2941 acctacatcc tacttcctat tataataaaa aaaaaactat tgtacgtacc acatcaacta 3001 ttt