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LOCUS XM_013246664 3017 bp mRNA linear INV 02-SEP-2023 transcript variant X3, mRNA. ACCESSION XM_013246664 VERSION XM_013246664.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013246664.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3017 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3017 /gene="LOC106083564" /note="REST corepressor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins" /db_xref="GeneID:106083564" CDS 321..2417 /gene="LOC106083564" /codon_start=1 /product="REST corepressor isoform X1" /protein_id="XP_013102118.1" /db_xref="GeneID:106083564" /translation="MVLAERNSELVRNGRRSRGPSPNGHGASSGSASASAPGGTGTGT PETSSDDDNSIKRNGKSKTKQSEYEEKIRVGRDYQAVCPPLIPEPERKPECLNDRALL VWSPTKEIPDTKLEEYISVAKEKYGYNGEQALGMLFWHKHDLERAVMDLANFTPFPDE WTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRHRQSVMDRQEKV KASKEGSSENGSDNGSNEESDNDDKDQTLSSHAGLLYDQTNDSHDGGGGAGVDIENHF LNTNTNTNNNNNNNNISNNKQQPQQQQQQLQTPSISNSDTIYSNGISTCTNAAANSSN SVNNNNNAAILSSVGSVGGGGYCSNCGVACNILHNSPHGKLCSSCHHHWRRTGNKRPT SGPFFGKRSRDRNAERHKRKPPRGMYINHDDIVALASANDNQDELLANIDREIVSLLS QVQLNKQNISSLKRKNSDNLEEIRPTENANRINARWTNDEIHLAVQGVKKYGRDFQAI AETLGTKTEAHVRNFYLNQRRRYNLDQIIKKHEAEKEAAAGSVALSANAASNSNSNSA ASSASNSAPAANSSVSADLPNNTPNSIIKDEVPTVPAQQPTKKKDIPNSVNEESDNTT SSETAISKSTISTVTTTSDERKSESSLSASNLQKDNVIMEIDLDADQPDVTQPPPAKK IALSVATQEFPKSSPA" misc_feature 534..692 /gene="LOC106083564" /note="ELM2 domain; Region: ELM2; pfam01448" /db_xref="CDD:460214" misc_feature 798..932 /gene="LOC106083564" /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is...; Region: SANT; cl21498" /db_xref="CDD:473887" misc_feature order(801..803,888..893,897..902,906..914,918..926) /gene="LOC106083564" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:212559" misc_feature 1773..1904 /gene="LOC106083564" /note="Myb-like DNA-binding domain; Region: Myb_DNA-binding; pfam00249" /db_xref="CDD:459731" ORIGIN 1 agaccatagt gaattgtcgc aacaaatttt aatcacaagc cttggacgaa gattgtataa 61 aataataatt aataataatt tgaaacgttc actagctttt aaagtggatt atatataaaa 121 cgtctaataa ctggaaggaa tttaggaaga gaacagtgaa aatttaaaac attcaatatt 181 ttgttttaat acgttcctca ttgattggtt ggattgactt ggtgtatctt gtttactttg 241 cttttcgctg ctgcagcgtg attcattatt gcttaaggaa aagtgacgac gataaatttg 301 aaattattaa caaacaaaaa atggtactgg ccgagcggaa ttcagagtta gtgcgcaatg 361 gcagacgctc tcgaggtccc agtcccaatg gccatggtgc aagttcggga agtgccagcg 421 caagtgcacc aggcggaacg ggtactggca ctcccgaaac atcatctgat gatgacaatt 481 ctattaaacg gaatggaaaa tctaaaacta aacaaagcga gtatgaagaa aaaatccgtg 541 tcggtcgaga ctatcaagcg gtgtgtcccc ctttaatacc tgagcccgaa agaaaacctg 601 aatgccttaa tgatcgcgct ttgctagtgt ggtcacctac aaaagaaata ccagatacta 661 aacttgagga atatatatca gttgccaaag agaaatatgg ttataatggt gaacaagctt 721 tgggtatgtt attctggcat aaacacgatt tggagagagc tgttatggat ttggcaaact 781 ttacaccctt ccctgatgaa tggacagtgg aagacaaagt tttgtttgaa caagcatttc 841 aattccatgg caaaagtttt catcgcatac gtcaaatgtt gccagataaa tccattgcta 901 gcttagtaaa atactattac tcatggaaaa agacacgaca tcgtcaaagt gttatggatc 961 gtcaggagaa agtaaaagcc agcaaagaag gttcttcaga gaatggcagt gataatggaa 1021 gcaatgaaga atccgacaat gatgacaagg atcagacatt atcatcacat gcaggattgt 1081 tatatgatca aacaaatgat tcgcatgatg gtggtggtgg tgctggtgtt gacattgaaa 1141 atcatttttt aaataccaat accaacacca acaacaataa taacaataac aacatcagca 1201 acaataaaca acaaccgcaa caacaacaac aacaactcca aacaccgtcc atatcaaatt 1261 ccgacacaat ttattcaaat ggaatttcca cttgcacaaa tgccgccgcc aatagcagca 1321 atagtgtcaa taacaataat aatgccgcca tcctctcttc tgttggcagc gttggtggtg 1381 gtggttattg ttcaaattgt ggcgttgcct gcaatatttt gcataactct ccccatggca 1441 aattatgttc cagttgccat caccattgga gacgcactgg caataaacgt cccacatctg 1501 gaccattttt tggcaaaagg tcacgagatc gcaatgccga gcgacataag cgcaaaccac 1561 cccgtggcat gtatataaat catgacgata ttgtggcatt ggccagtgca aatgacaatc 1621 aagatgagtt gctagccaat attgatcgtg aaattgtatc ccttttgagt caagtacaac 1681 tgaataagca aaatatctca tctttaaagc gtaaaaattc cgataatttg gaagaaataa 1741 ggccaacaga aaatgccaat cgcattaatg cacgttggac aaacgatgaa attcacttgg 1801 ccgttcaagg tgtgaaaaaa tatggtagag attttcaggc aattgccgaa accttgggca 1861 ctaaaacaga agctcatgta cgaaattttt atttgaatca acgtcgtcgt tataatttgg 1921 atcagattat taaaaagcat gaagctgaaa aagaagctgc tgctggcagc gtagctttaa 1981 gtgccaatgc tgctagtaat tcgaacagta attcggcagc ttcaagtgct tccaatagtg 2041 ctcctgctgc aaactccagt gtcagtgcag atttacctaa taacactcca aactcaatca 2101 taaaagatga agttcccact gttccggcac agcagccaac taaaaagaag gacataccaa 2161 atagcgtcaa tgaagaatct gataatacaa catcaagtga gacggccatt tcgaaatcaa 2221 caatttctac agtcaccaca acttcagatg aacgcaaaag cgaaagcagt ttaagtgcta 2281 gcaacttgca gaaagataat gtcatcatgg agattgattt agatgctgac cagccagatg 2341 taacacaacc gccgccagcc aaaaagattg ctttgagtgt tgcaactcag gaatttccaa 2401 aatccagccc tgcttaaata ataagaattt tatgaaacat ctaacgtttc aacaattatg 2461 cgcgtaatat aaaacaaaaa aaaagcaact acagggttga aagcaaaaga aatgggtctt 2521 agcatttcta agagaaaaaa ggataagcga ggaaaaattt ttactcaagc caccttttgc 2581 ctacgttaag aaaaatggag caatacaaaa cgatgcagta gatctgcatt ttagtagacg 2641 ggatgataaa caaattaata tggttggcca tatatctctt atgtactttt ttttaaattt 2701 tatttggact atataaatgt ccgatgtgtt cttataatat tctataattt tcggaatgac 2761 ttactgacta attttaattt gttttttcct ttttgttttg ttataattag atatatatat 2821 gataattaaa tatacataca tgcatatata agagtgcaaa aactaaaatg aataatcttg 2881 tattttctat tcaagctcta agaaaagtat ttcggcaatt tccaattaaa aaacaattaa 2941 agaactcaat ttaaacctac atcctacttc ctattataat aaaaaaaaaa ctattgtacg 3001 taccacatca actattt