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PREDICTED: Stomoxys calcitrans probable basic-leucine zipper


LOCUS       XM_013246653            2974 bp    mRNA    linear   INV 02-SEP-2023
            transcription factor R (LOC106083559), mRNA.
ACCESSION   XM_013246653
VERSION     XM_013246653.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013246653.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2974
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..2974
                     /gene="LOC106083559"
                     /note="probable basic-leucine zipper transcription factor
                     R; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:106083559"
     CDS             659..1549
                     /gene="LOC106083559"
                     /codon_start=1
                     /product="probable basic-leucine zipper transcription
                     factor R"
                     /protein_id="XP_013102107.1"
                     /db_xref="GeneID:106083559"
                     /translation="MSTGVGGGGSITTDHHSRLYFLNSPTAPLSARDPFLIKPEYLNY
                     DNPMHHLYPSNRGLIDYNNYTVTAAAVNAAAAASANTNSSNNNTNNNTSSASTTNTNN
                     NSTAAAAAAVAANPTVVAAVALNLENTFHHQAQQVVQQQQQQLQTTNTQHVANAATTT
                     ATHPLHHTLSTPPTQSTRAQKAARRRSNESPEARQRRLERNAARMREKRAKESEAEYR
                     LRLAKNAEANRIRRQNENEVQRTLRLMKNAARQRLRRASETPEERKKRLAKAAERMRV
                     ARAKQPKIPKPPLEDRLKGY"
     misc_feature    <1190..>1516
                     /gene="LOC106083559"
                     /note="electron transport complex protein RnfC;
                     Provisional; Region: PRK05035; cl47132"
                     /db_xref="CDD:481472"
     polyA_site      2974
                     /gene="LOC106083559"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcattcattt gaaaaagcat ggaagttgta ttatgggaaa tgtaaacaaa acagctacaa
       61 acatgcacac atgtgtatag taagcccgca gcgttgtgca agaaaagtac tctcgtggaa
      121 gaaacgcaat ttactattaa ttagagattg acaaataact agaaagtttt gtagatttta
      181 aaaagaacaa gaaatatata ttcccaaacg cgcaataaaa agtataaaca aatatttaat
      241 attttgaatg aactattgaa tgcgacaccc tcttttttcg catttgctat tgtagtataa
      301 caaccctgct tttgtcactg gcaatttcca atgaaatgac gtttgcgcag tttttgccac
      361 tttccaataa gatgttggaa atttttttct attgattagt tgaagttatg tcgcttttta
      421 ttgtttactc tcaaagtttt ttgttaaatt ttgtgtaaaa aacctttgtg aaatccagta
      481 aataacgaaa attttggaca agaagtgcta cgagattttg ctagaataaa aacgagtata
      541 gaaataaaga tgcaagttaa aggagcgcga atcttgtaaa gtgagtgtgt gagtgaaaaa
      601 aaagtgaaaa aacagaaaca gcgattgata caacatcatc gccaaaccac cactacagat
      661 gtccacagga gtgggaggtg gagggagcat aacgacagat catcatagcc gcctgtattt
      721 tctgaactca cccacggcac cactgtccgc acgcgacccc ttcttaatca aacccgaata
      781 cctcaactat gataatccca tgcatcatct gtacccaagc aatcgggggc ttatagacta
      841 caataattat acggtaacag cagcggcagt aaatgcagcg gcagccgcct cagcgaacac
      901 caacagcagc aacaataaca ccaataacaa tacatcatct gcctccacca ccaataccaa
      961 taataactcc accgccgctg ctgccgccgc tgttgctgcg aatccaactg tagtggcagc
     1021 tgtagccctt aatttggaga atacctttca tcatcaggcc cagcaagtgg tccagcagca
     1081 gcaacaacaa ttgcaaacaa caaacaccca acacgtcgcc aacgccgcca ccaccacagc
     1141 cacacatccg ctgcaccata ccctcagcac acccccaaca cagtcaacac gcgctcaaaa
     1201 agccgcccgt cgccgcagta acgaatcacc cgaggcccgc caacgaagac tggagcgcaa
     1261 cgccgcaagg atgcgcgaga aacgcgccaa agaatctgaa gctgagtatc gcttacgtct
     1321 ggccaagaat gccgaggcga atcgtatacg tcgtcagaat gaaaatgaag tacaaagaac
     1381 cttaagactg atgaaaaatg cagctcgtca acgattacga cgggccagtg aaacgcccga
     1441 agagagaaaa aagcgtttgg ccaaggcagc tgagcgtatg cgtgtagccc gtgccaaaca
     1501 acccaaaata cccaagccgc cgctggagga tcgtcttaag ggctactaaa agagacacac
     1561 gtcgacgtca aagccacccg caaaacgcag cgccacaata acaactatta catcaacatc
     1621 atcatcatcc aacagtaact tttaaacttt tcttcttctt ctgcccaggc aatcagagac
     1681 caggacaaag attaggcggc tcatattaca tacacaatat gtcgcaatat gaggtagtac
     1741 taccagtggg gggaagttaa gaggagtcag actctgtcag atgacgatga tgacgacgat
     1801 gacacgacag gcagaaagaa caatacagct aaacataata tttaaaacaa aaacaaaaac
     1861 aataacatta aacacacaaa atctacactc agagaagaaa caaaacacca gcacattaga
     1921 aattataggc accaccacca ccaccacccc cccaaatcca caaccctcaa aaactaccca
     1981 caccattact ctgctaatta tttttgggtc ccttttttga cctgttttta aaagttttag
     2041 tcattgtgga aaatttttca agacatttac taacatccca tgttggctgt atgtcatggg
     2101 ggatggcagt tttaactaat ccgcaatctt gtaatccccc atatggcaca tacagtacac
     2161 acatacatac acgatgtaat tttcaggaat ttattgaatc ctgtttctaa tttgtaattc
     2221 taaacatcca caactcgaaa agggaaggtg gaaggcatga tttcacatcg acttttttca
     2281 aatatgtccc caattgacga actcttcgaa agctaagaat tgttcttttt tcatttaatt
     2341 tatatggagt tcatattgtt tcacttctat tttctaataa tcacaaaagt acagaagata
     2401 ataatgttta gtttttgaag aaagagagcg agagagagag cgagagagag agagagaaag
     2461 gagaaggcta aagtttacat gattggagaa aacggcaaaa aaaaatcaaa atctaccgaa
     2521 aaacgctttt ttcattctgt tggagcgtac ttaacaagag acacaaaaag atgtgggcga
     2581 tgggggctaa acaaacgacc atcattaacg aaaggcatgc actaaaagtc gattgattga
     2641 tcgaacaaca caaagcgtta ctcactctga atataaaaga aaagtttgtg tgtgtgtgtg
     2701 tgtgtggttt cattgtcgtt ttcgttgacg agctgcatct ttcatcagct ttaaggttca
     2761 gagttttttc tacatttcta aagagagcca gccgccttcc tgacttatag cgataatgga
     2821 aaatatcatc tacctgctaa gggccggtag atgtggtttc accacaacta aaactaaact
     2881 taaatctatt ctaaaatatt gatatataaa ttaaaaccta atggatttct gtatgaatcc
     2941 caaaaacata tataaaatat tttaacattt tcta