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LOCUS XM_013246519 2376 bp mRNA linear INV 02-SEP-2023 1 receptor (LOC106083463), transcript variant X5, mRNA. ACCESSION XM_013246519 VERSION XM_013246519.1 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2376 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2376 /gene="LOC106083463" /note="calcitonin gene-related peptide type 1 receptor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:106083463" CDS 393..1910 /gene="LOC106083463" /codon_start=1 /product="calcitonin gene-related peptide type 1 receptor isoform X1" /protein_id="XP_013101973.1" /db_xref="GeneID:106083463" /translation="MELLLNQLSRSKRDANLKEFLTHLFVDCMVKYKNESWFRNQSAQ STEFPTSIPRYVEDAVLNQGSINLENVNIAEEERNELYATISAATLSPNSITSFTEAV EDAFTTNGMSTTGQYSSTASTPTEEVAFCPLRFDGYLCWPRTPAGTVLSQYCPDFVEG FNSKFLAHKTCLENGTWYHHPESLQEWSNYTNCIDYEDLEFRTFVNELYVKGYAVSAV ALILSLIIFLGFKSLRCTRIRIHVHLFASLAFTCITWILWYKFVVEEPETIRDNTYWC ISLHLLIHYFMLVNYFWMFCEGMHLHLVLVVYPLSFPPKVFVKDTVVMRWFKIFSWLS PLIFVTAYGVARYFHPEDNTHCWMKDSFLLWIFSVPVCVSLVSSFFFLVNVLRVIVRK LHPQSAQPAPLAIRKAVRATIILVPLFGLQHFLLPYRPDTGTPLERFYQLLSVILVSL QGFVVSFLFCFANHDVTFAVRSLLNRLMPSLVSPPPPTSSTGQVATTTPSRELGV" misc_feature 780..974 /gene="LOC106083463" /note="Hormone receptor domain; Region: HRM; pfam02793" /db_xref="CDD:397086" misc_feature 996..1820 /gene="LOC106083463" /note="insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; Region: 7tmB1_NPR_B4_insect-like; cd15260" /db_xref="CDD:320388" misc_feature 1002..1079 /gene="LOC106083463" /note="TM helix 1 [structural motif]; Region: TM helix 1" /db_xref="CDD:320388" misc_feature order(1017..1019,1029..1031,1155..1157,1164..1169, 1176..1178,1221..1223,1242..1244,1479..1484,1488..1490, 1494..1496,1659..1661,1668..1670,1713..1715,1725..1727) /gene="LOC106083463" /note="putative polypeptide ligand binding pocket [polypeptide binding]; other site" /db_xref="CDD:320388" misc_feature 1104..1172 /gene="LOC106083463" /note="TM helix 2 [structural motif]; Region: TM helix 2" /db_xref="CDD:320388" misc_feature 1221..1304 /gene="LOC106083463" /note="TM helix 3 [structural motif]; Region: TM helix 3" /db_xref="CDD:320388" misc_feature 1362..1424 /gene="LOC106083463" /note="TM helix 4 [structural motif]; Region: TM helix 4" /db_xref="CDD:320388" misc_feature 1470..1559 /gene="LOC106083463" /note="TM helix 5 [structural motif]; Region: TM helix 5" /db_xref="CDD:320388" misc_feature 1602..1685 /gene="LOC106083463" /note="TM helix 6 [structural motif]; Region: TM helix 6" /db_xref="CDD:320388" misc_feature 1704..1781 /gene="LOC106083463" /note="TM helix 7 [structural motif]; Region: TM helix 7" /db_xref="CDD:320388" polyA_site 2376 /gene="LOC106083463" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 acatgacgga agttgataac ggaaccacgg aaacctttta aaattgaaat atttcaagtt 61 aagcggtcaa acagtaacaa ttattcggaa acggaaatac cggatataaa ataaaaaaaa 121 aaatacatag aattgcaaaa taaatgtgtg tgacaaatat acaactaact ggattagatt 181 gcgaaaccag aaaggaaaat gttttaaaca agtgaaaggt agtaagtgga ttggaaaaaa 241 ttcaataaaa aacgattcaa atttattgga taaaaaactt taagcttttg acgagttatg 301 acaatcttgt ggattttttc gtttctaaat taatgacaat gatttaaact caatattgtg 361 ggagataaag gttaaataaa tacaacaaaa acatggagct gttactaaat caacttagtc 421 ggagtaaacg ggatgccaat ctaaaggaat ttctaacaca tctatttgtg gattgcatgg 481 tgaagtataa aaacgaatca tggtttcgaa atcaatcggc acaaagtact gaattcccca 541 cctccatacc acgctatgta gaagatgctg ttctgaatca gggctcaatt aatttagaaa 601 atgtcaatat tgccgaagag gaacgcaatg agttgtacgc caccataagt gctgccactc 661 tttcgcctaa ttcaattact tcatttacgg aggccgtgga agatgcattc acaaccaatg 721 gcatgtcaac aaccggccaa tactcatcaa cagcttccac cccaacagag gaggtggcat 781 tctgtccctt gcgctttgat ggctacctgt gttggccacg caccccagct ggcactgtac 841 tcagtcagta ttgtccagac tttgtggagg gatttaatag taaatttttg gcccacaaaa 901 cttgcctaga aaatggcaca tggtatcatc atcccgagag cttacaagag tggtccaact 961 atacaaattg cattgactat gaagatttgg agtttcgaac atttgttaat gaattgtatg 1021 tgaaaggcta tgcagtgtcc gctgtggcat taattctctc ccttataata tttttgggtt 1081 ttaaatcctt gcgttgcacc aggattcgca ttcatgttca tttattcgcc tctttggcat 1141 ttacttgcat cacttggatc ttgtggtata aatttgttgt tgaggagcca gaaacaatac 1201 gagacaatac gtattggtgt atctccttgc atttgctaat tcattacttc atgttggtca 1261 actacttttg gatgttctgc gagggaatgc atttacattt ggtgttagtg gtgtatcctt 1321 tatcttttcc accaaaggta tttgtcaagg acacagttgt tatgcgttgg ttcaaaatct 1381 tttcctggtt gtctcctctg atctttgtga cggcgtatgg ggtggctagg tattttcatc 1441 ccgaagataa cacacactgc tggatgaagg atagcttcct tttgtggata ttctcagtgc 1501 cggtgtgtgt gtccttggtt tcaagtttct ttttcctggt gaacgtattg cgtgtgattg 1561 ttcgcaaact gcatccacaa tcggcacaac cagctccttt ggccatacgc aaggccgtac 1621 gagccacgat tattttggtt cccttgtttg gattgcagca ttttctgcta ccctatcgtc 1681 cagacactgg cactcccttg gaacgtttct atcaattgtt gtcggttata ttggtaagcc 1741 ttcaaggatt tgtggtttcg tttcttttct gttttgccaa ccatgatgtg acttttgcgg 1801 tgagaagtct attgaatcgt ttgatgccca gtttggtttc tccaccacca ccaacaagta 1861 gtacaggtca ggtggccaca acaacaccca gccgtgagtt aggagtctaa gcgacagagg 1921 aaatgagtga gcaaacggta gcttaaccaa accgcccaaa tgtcaaggaa cagtccacat 1981 cataatcact ctttgacaaa ttactatatt gaaatgtcaa ccataatccc aaccgaatga 2041 tcttccagga ccaacctttt tcttttagtt ttgtatttat tagataacta tccttcttca 2101 agggttattt tagccgtttg gcaatttctt ctcaaaatga atcttttgta cattttgtaa 2161 tacatacatg ttgaattgta ctcacaaaat ccttaaccca tacacttgta gtaccatgga 2221 caagaatcat atataaactt gtataagaat gtatatctca caaataataa tgaataaaat 2281 atcatatgta actgacagtg gtttccacaa taaatgtaac aaatacaata cacggaatgg 2341 aaaattatat ataaaacgtt taagcacatg agaaaa