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PREDICTED: Stomoxys calcitrans homeobox protein cut (LOC106083366),


LOCUS       XM_013246472            5843 bp    mRNA    linear   INV 02-SEP-2023
            transcript variant X21, mRNA.
ACCESSION   XM_013246472
VERSION     XM_013246472.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013246472.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5843
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..5843
                     /gene="LOC106083366"
                     /note="homeobox protein cut; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:106083366"
     CDS             2439..5162
                     /gene="LOC106083366"
                     /codon_start=1
                     /product="uncharacterized protein LOC106083366 isoform X7"
                     /protein_id="XP_013101926.2"
                     /db_xref="GeneID:106083366"
                     /translation="MFIPDSLRSCMIETDVNSYLQTSSSGQDEFHPFIEALLPYVKSF
                     SYSWFNLQAAKRKYYKKHEKRMSLEEERHCKDELQNEKAEVKQKWASRLLGKLRKDIT
                     QECREDFVQSITGKRKSICVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKAIPL
                     ESTDGERLEKSPECIHPALCVNPYHINVSVRELDLYLANFINTHDPLSSPTPTTPPPG
                     TPSTPSLMLYSNEHNASTNNNNTNSSDNKKHIEEERKNKDVDNTPFAGYSHNPYNGVV
                     CNDIILATGVFSSKELWKLSKASILEETANDLIQASSIKLEHPAAAYECNTYQMSASG
                     APLGSVVGGVNSAGMVTASDGRASVSASMVLPSGYSIDFVDPRSSMHLSNSSLLRASS
                     ATTCKSDPNGSPQDGSSFSVILRQNEDNGSNGGAAASNNADDPALQRYTPTSNRVLLS
                     MGQMRPGEVLMQHNVSSSLVPNSVSPALYYPQQNSPNSNANEAAEEAHHQQHHHQQQQ
                     HHQHHHHQHQLHQASATPKYATELVNHGQDMSEFVAYVCQDTGGIHAANAGDPSDLHV
                     HHHQTSSHFQLQHAAAAAAVGRGPKISAVSAAAAAAHYQQYSTMLPPPPLPPMARPVA
                     IIRSTGDLTMVASPPSSAAISPPPLTSVSSAGDSPRHHHQSLQHHHPSSHHHHHHHHH
                     GHQQQQQQHHQAQQQHTTIDHTSNSSSGLSSMTSKLTNTTASTSSAQESTTSTITVGS
                     NNNSSDLVVASTASASPPPAPTQSPHAHIIDVARCKTSPTSSAAAAVAVSTPTSALTR
                     ISAQPYPNTNGREYFNHFHTQTTPLLGYTTMSGVISPTNLSLYSSTTGVTSHRTTPRS
                     RWNSSFLSMEDDFNMMSHTLTSTNPEATPVILMEDSGRYSDEYVTSRDYVT"
ORIGIN      
        1 acgacataga atttgagcag agcgccatac ggtaaagcca atagtgacag caaaacagcc
       61 aacaagcaag agcccatcat aacacattaa atggtgagtg aggaaaaacg tttcgtcttg
      121 tcttgtctgg tctggctctg gtctggtatc gtacgtttcg tttgctcaga ctaaaagggg
      181 aaaatgtgaa aactgcttaa acggaaaaat aaaaaaaaaa taattataaa aaaacaaaaa
      241 aaaaattaaa agcctttatt tattaagtgg agtaacagaa ggaggtggtg aaaagtttaa
      301 aacagaattg tagtttttcc tgtgtaacat gcttaaaaga aaattgaaga aaaatcaaaa
      361 ataaaaatga tgtttggtag tttaacaaac taaatcaatt atttttttgt ttaacgaaaa
      421 agtgaaagtt atgatttttc taatattaag aaattgaaaa aaagtattat gaaaaagttt
      481 acttaaaact cacagccaca tagaaatgtc tcgttaaaat acatatgtgt ggctaggtat
      541 ggcatataca tatgtacgcc acacacatgc acactctcac ctagccatgc acagtatagg
      601 ccaaaaagtt atttttatat aatgtagagg aaacgaaaac attgccgaga aaaatactca
      661 ctcattcact cgctcactca ctaggctgct cgctcgcatg tcaaaggcga aaaacgtacg
      721 gaacgggaaa aaaatcacaa aacgaaaaca aaaataagtc gcacacgatt cgaaaaaaat
      781 aaaacaaaaa caaaaacaac aagaagcaga acgaattttc ttttttcctt ctttttctga
      841 gtgctcgact gcctgcttgc ctgcctgcct gtcgtcgtct gtctgtctgt cgtctcttct
      901 tttgcgtttg aacaaaaaaa ttgtgtaaca aaaattcaaa ataaattttt tcaccaaaac
      961 ccatatccct ttcaacgaat tttaaaacga aaaaaatcca ctgtaaaagg aaaatttgtg
     1021 caaaaaaggg cttcttagcc aggaaatgtg aaatgtgaaa agcaaatgga gttgacagtg
     1081 attggcaaat gtcggtgcaa gaaatcgata atgggcaaag caagcggccc aaccaagttt
     1141 gttcttctaa aaagcctaca taaataaaca aagaaaattt ataaaaaaaa aaaataagaa
     1201 aataaacaaa aacgtcaacg gcaataataa tatagaaatt gttttggtta attatttttg
     1261 gtttatcact caacgtcatt tagtgagtcc tcgtcacgat tgtgtgattt attttcccta
     1321 aaaaatctct gtttaattta aaaatcagac aatagcaaca ataaaacaac tgtatgcaca
     1381 aaaataaatt ttaatttttt ataaaaaaat gtaagcaaca gcaaaaaaag acaataagaa
     1441 atttggaaat aaaaagaaac aacaacaact aaaataaaat aatagcaaat agcaaaatgt
     1501 tcgatatccg ttgagttcct ataacaaatg gctgataaac aacaacgaca acaacatacc
     1561 acaacataaa taaaataaca actacagcac gtacaaccaa caacatctct ctctctctct
     1621 ctctctctgt ctctctcgct caacacactc tcatagcaac accaaaaaaa tcaaatcaac
     1681 aaaagaaaac tctgcaaagc aaaataaata aataaaacaa caactacaaa agcagtctct
     1741 ctgacaacaa caaaagaaaa agcagccgca tccataggcc accagacaat gataatgtcg
     1801 ttgataatgt tgccacctgc cacctttaaa gatactgtct acaaaacatt gccaatgttg
     1861 ttacgagcct aaagggatat cctcaaaaaa aaaaacaaac agcagcgcag cagttgtcat
     1921 ctgtctactt cgacttcttc gtcttcttct ttctttatct ttcccatatt cagtctttcg
     1981 cacaaaccat acactctcgc tcacttctat gccaaaggca aggctgataa acaaatgttg
     2041 gtgggattta atattttcaa cagaaatttt cttactctgc tttaaaagac ttcttcgcat
     2101 ctcaatctct tatcctgttt tatggacaga tttcctgttg gcccaacatt gcgtgcggtt
     2161 gtgttgaccc aatttcatca cttcaactag acacagccat ccaagacatg aaaagaaaag
     2221 ctcaaattca aaaataaaac caaaggtctt ccaagtataa caaaaactag aaacaacatc
     2281 ctgtaaaact caataaaaaa aaaacaaaaa caacaaaaaa ccaaggcaaa ccacaacgac
     2341 taacaacaat tgcaaaaggc aaacagagaa acaccattct catcaataat aacaacaacg
     2401 aacaacggag taacatacaa aagccttttt cacaaggcat gtttatacct gattcactgc
     2461 gtagctgtat gatcgagacg gacgttaact cttatctgca aacatcatcc tcaggacagg
     2521 atgagtttca tccgttcatt gaagccctgt tgccatatgt caaatcattt tcgtactcgt
     2581 ggttcaactt acaagcagcc aagcgtaaat actacaagaa acatgagaaa cgcatgtcat
     2641 tggaggagga gcgacattgc aaggatgaac tacagaacga aaaggctgag gttaaacaga
     2701 aatgggcttc ccgtttgctg ggaaaattac gcaaagacat aacccaagaa tgccgcgaag
     2761 actttgtaca gtccataacg ggcaaacgca aatcgatatg tgttctctcc aatcccgatc
     2821 agaaaggcaa aatgcgtcgc atcgattgtt tgcggcaggc ggacaaggtt tggcggctcg
     2881 atctagtcat ggtcatactc ttcaaggcca tacctttgga gagcaccgat ggcgaacgtc
     2941 tggaaaaatc tcccgaatgc atacacccgg ctttgtgtgt caatccctat cacatcaatg
     3001 tctcagtgcg tgaactcgat ttgtatttgg ccaatttcat caatacccac gatccattga
     3061 gtagtcctac gcccacaaca ccgcctccgg gcacaccctc aacgccttcg ctcatgctct
     3121 atagcaatga gcataatgcc agcaccaaca acaacaacac caatagctca gacaataaga
     3181 aacacataga agaagagcgc aagaacaaag acgtagacaa cacaccattt gcaggctaca
     3241 gccacaatcc ctacaatggt gttgtgtgca atgatataat tttggccact ggtgttttct
     3301 cttccaagga gctttggaag ctgtcaaaag cttccatatt ggaagaaacc gccaatgatc
     3361 tcatccaggc tagctcgatc aaattggagc atccggcggc tgcctatgag tgcaatacat
     3421 atcaaatgtc agcctcagga gctccactgg gttcggtggt gggaggagtt aacagtgcgg
     3481 gtatggtgac agcaagtgat ggcagggcct cggttagtgc ttccatggta ttgccctcgg
     3541 gttacagcat tgactttgtg gatccacgca gcagcatgca tctctcaaac tcctctctgc
     3601 tgagggcctc ttcggctacc acctgcaaaa gtgatcccaa tggctcgcca caggatggca
     3661 gcagtttctc tgtgatattg aggcaaaatg aagacaatgg cagcaatggc ggagccgctg
     3721 ccagcaataa tgccgatgat cctgctctac agaggtacac gcccaccagc aatagagtgt
     3781 tgttgagtat ggggcaaatg aggccaggag aagtgcttat gcaacacaat gtcagctctt
     3841 ccttggtgcc aaactcggtt agccctgctt tgtattatcc ccagcagaac agtcccaact
     3901 ccaatgctaa tgaggccgcc gaagaagccc atcatcagca acaccatcat cagcagcaac
     3961 aacaccacca gcatcatcat catcaacatc aactgcatca ggcatccgct acacccaaat
     4021 atgccaccga gttggtcaac cacggtcagg atatgtcgga atttgtggct tatgtctgcc
     4081 aggatactgg gggtatacat gccgccaatg cgggcgatcc ttccgactta catgtgcatc
     4141 atcaccaaac gtcttcccat tttcaattgc agcatgctgc tgccgccgct gctgtgggtc
     4201 ggggtcccaa gatttcagca gtctcggctg ccgcagctgc ggcacattac cagcaataca
     4261 gcaccatgtt gccaccacca ccgctaccgc ctatggcccg gccggtggcc ataatacgtt
     4321 cgacggggga tttaaccatg gtggcgtcac caccctcatc tgccgccata tcaccgcccc
     4381 ctctgacgag tgtatcctcg gctggtgatt cgccacgaca tcatcaccag agtttgcagc
     4441 atcatcatcc ttcctcacat catcatcatc accaccatca tcatggacat cagcagcagc
     4501 aacagcaaca tcatcaggca cagcagcaac acaccactat cgatcacacc tcgaattcca
     4561 gcagtggcct aagctcaatg acttcgaaac taaccaacac aaccgcctcc accagttccg
     4621 cccaagagtc tacaaccagc accataactg tgggcagcaa taataattct tccgatttgg
     4681 tggtggcctc tacagcgtcg gcatcaccgc ctccagcacc cacacaatcg ccgcatgcac
     4741 acatcataga tgtggcaaga tgtaagacat cgcccacttc atcggcggcg gcagcagttg
     4801 cggtgtccac acccacatcg gcgttgacgc gtatatcggc ccaaccgtat cccaatacga
     4861 atgggcgtga atactttaat catttccata cacaaaccac accgctcttg ggttatacca
     4921 ccatgtcggg ggtcatcagt cctacaaatc ttagcctcta ttcatctaca acgggtgtta
     4981 catcgcatcg caccaccccc aggtcacgct ggaattcctc ttttctttcc atggaagatg
     5041 atttcaacat gatgtcccac acactgacaa gcacaaatcc agaagccact ccagtcatac
     5101 ttatggaaga ttctggtcgt tacagtgatg aatatgtcac aagtcgtgat tatgttacat
     5161 gattataaat gcatcaatcg ttttatatgc cctactagaa ctgcaatcac agcaacagac
     5221 agcaacaata ataacaaaca aaccaaaact gtaagaaata ataacactac tattctatac
     5281 atacatatat atatatacat acatctattc tatactgtaa ctatagatac aactagaata
     5341 tttatatata aaaaaattat tattattatt tattattttt atataattaa gagaagagag
     5401 aaaaaacaaa aacacttgtt ttaggaaatt tatttgcaag caaacatgtt gaaatgtttg
     5461 agaggaaata ttatatacac atatatagct caaggcaaat ccctaagcag ttatagatca
     5521 tgaaaaaagt cggagttcga ggcaattgga tacaccaatg aagagaaagt ataaagttca
     5581 aatgaaaatt caatttgaag ctaagatttc attgtttttg gtattgtttt tatttaatgc
     5641 ttgaagaaga taatatagct caaggtctta gctgttttta acaatttgaa tctatttcct
     5701 aagttaatta aatcaaaagt tttagggaaa aaactgattt attaacaaaa tttatataaa
     5761 tcatacgcaa cctgggcaaa aaatcagttt ttaattaata tcttatttta aacggatttt
     5821 tgtatggttt ttctttgttt tat