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PREDICTED: Stomoxys calcitrans proton-coupled amino acid


LOCUS       XM_013246144            1452 bp    mRNA    linear   INV 02-SEP-2023
            transporter 1 (LOC106083234), transcript variant X3, mRNA.
ACCESSION   XM_013246144
VERSION     XM_013246144.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013246144.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1452
                     /gene="LOC106083234"
                     /note="proton-coupled amino acid transporter 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:106083234"
     CDS             132..1349
                     /gene="LOC106083234"
                     /codon_start=1
                     /product="proton-coupled amino acid transporter 1 isoform
                     X3"
                     /protein_id="XP_013101598.1"
                     /db_xref="GeneID:106083234"
                     /translation="MGFAFMHGGLLVAPILTVLIALVSIHCQHMLINSSIKMKTLRNA
                     EKYPDFAETIEQCFEMGPTATQRLSRTMKMLVNLFICVTQLGFCCIYFVFISTNVKQI
                     LLAYDIHLDVHYVMLITFVPIWLSSMITNLKYLTPVSFIANICMICGLSITMYYGLKD
                     GLPEIGDRKLYTTPMDLALYFGTAIFAFEGIALVLPLKNAMANPHNFDRPMGVLNVGM
                     FFVTLMFMTAGFVGYSKWGDDVAGSLTLNLGDTIGAQIVKAMVSMGVLFGYPLQFHIA
                     IQIMLPTVIETFKCYNHSLAANLTFRTFMVVVTLGIAELVPNLGLFISLIGSLCSTAL
                     ALVFPPIIELIVKRDISSTCSRYMMYLKNTIILVLAFAGFLAGTYESLSEIIKEFGSE
                     VKTTDSVLVDSNS"
     misc_feature    138..1268
                     /gene="LOC106083234"
                     /note="Solute carrier families 5 and 6-like; solute
                     binding domain; Region: SLC5-6-like_sbd; cl00456"
                     /db_xref="CDD:444915"
     polyA_site      1452
                     /gene="LOC106083234"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aagaaaaaac ccccagctcc cataacacgg ataccggaag ctcccaatgt cgatgatcac
       61 attaaaaagg aaatacccac cagtctttta ttcatctgct caagggcaac attggccctg
      121 gactctttgc catgggcttt gcctttatgc atggcggtct gctggtggca cccatactca
      181 ccgtactcat agccttggtg tccatacact gtcaacacat gctgataaat tcctccatta
      241 aaatgaagac tctaagaaat gcagaaaaat atcctgattt tgctgagacc attgaacagt
      301 gttttgaaat gggtcccacg gccacacaga gattgtcgag gaccatgaaa atgctggtga
      361 atctattcat ttgtgtgaca caattgggtt tctgttgtat ctattttgtg tttatcagca
      421 cgaatgtgaa acagattttg cttgcctatg acatacacct agatgtccat tatgttatgc
      481 ttattacctt tgttcccatt tggcttagtt ccatgataac caatctcaag tatttgaccc
      541 ctgtatcgtt tatagccaat atttgcatga tatgcggtct aagcatcacc atgtattatg
      601 gccttaagga tggcctgccc gaaatcggag atcgcaaact ctacaccaca cccatggact
      661 tggccttgta ttttggtact gcaatttttg cctttgaggg cattgccttg gttttgcctt
      721 tgaagaatgc catggcaaat ccacataatt tcgataggcc catgggagtg ctgaatgtgg
      781 gcatgttttt tgtcacccta atgtttatga cagctggttt cgttggctac agcaaatggg
      841 gagatgatgt agctggaagt ttaaccctta atctgggaga tacaataggt gcacaaattg
      901 tgaaggcaat ggtatcgatg ggagtattat tcggttatcc tctacaattc catatagcca
      961 tacagataat gttaccaact gtgatagaga cattcaaatg ttacaatcat tcattggcgg
     1021 ctaatttaac attcaggaca tttatggtgg tggtaacatt gggcattgct gagctggttc
     1081 ccaatttggg tctgttcatc tcactcattg gctcgctgtg ttccaccgct ttggccctgg
     1141 tctttccccc catcattgag ctgattgtga aacgtgatat ttcgagtacc tgctctagat
     1201 atatgatgta tctaaagaat accattatac tagtattggc ctttgctggc tttctggccg
     1261 gcacctatga aagtctttcg gagataatca aagaatttgg ttcggaggtg aaaacaaccg
     1321 actcagttct ggtggattcg aattcatgaa aatatcccaa aatagaccat aatcacatat
     1381 ccacaacaat aaaaaaacaa aaaacgagag agacatcatc aacttaaata aaataattca
     1441 aatattttgt ta