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LOCUS XM_013246138 6687 bp mRNA linear INV 02-SEP-2023 (LOC106083231), transcript variant X2, mRNA. ACCESSION XM_013246138 VERSION XM_013246138.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013246138.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6687 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6687 /gene="LOC106083231" /note="partitioning defective 3 homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106083231" CDS 1671..6182 /gene="LOC106083231" /codon_start=1 /product="partitioning defective 3 homolog isoform X2" /protein_id="XP_013101592.2" /db_xref="GeneID:106083231" /translation="MKVTVCFGDTRILVPCGDGNLLVKELIHEATRRYKKAAGKDPDA WVSVHHLQTQCGILDPDDCVRDVADDREYIHASFEDSGPDPGVPQGGGDGASGSSSVG TGSPDIFRDPTNTDAPTNGGHIDNSTPHIEVTSTTSCPMTGLGLQVRRSSDPNILASL KAAENGNKRWSAAAPHCGGDSPERILMEKSGYLPPQWEEEDDGHHQAQQVPQQQPFAR SGRLSMQFLGDGTGYKWIEAAEKLQQNSHHHPQQTPQHQQHSQSPQAQTNFFTSKSLP RESTRKEPLGQAYESIREKDGEMLLLINEYGSPLGLTAIPDNEHGGGLLVQHVEPGSR AERGRLRKGDRILEINGTKLIGLTELKVQEYLRKALEASELRVRVIRGNASSKEAKYR RRDSKVAEMIEAEEKMATGLESKVATVSPTRKPNTAPVGASLQVANTRKLGRKIEIIL KKGQNGLGFTITTRDNPAGGHCPIYIKNILPRGAAIEDGRLRPGDRLLEVDGILMTGK TQTDVVSILRATQPGATVRLMVSRQHDLAEPEEREINFENKENEFDSPPKPPAPVLPA SMQTPQHEVKKSQSARSLFEQHQQQQHHNLNESQHFIDAGSESAASSDSLQAGVAWRS REMLTFHIPVHDTEKAGLGVSVKGKTSSNLTGSSNGSSNGSMKNDGDLGIFVKSVIHG GAASRDGRLRMNDQLVSINGVSLLGQSNAEAMDTLKRAIVNNPGKHPGMITLQVARKI TRSSSSGDILEHTNESSSTSENSGATVIYLSPEKRNSDINRHNNGASATNDMNRWSNP VLDRLTGGACSGNSTQKSRSNAAGPSAVTVLSSSGKTPGGGGGANSGVHALRNESYYM ATNDTWSPAMHHTQKHINNSVLIEHDPEPISPTLPHRPNESLASTITNNTSGSNATPQ PGGGPQNFDATYSSQLSLETNSGVEHFSRDALGRRSISEKHHAALDARETGTYQRNKK LREERERRVAQTKSAVYGSMESLTARIAEANARIPGYKHAKTNSGIEQQHMQAESRDQ VGDLGPSLGLKKSSSLESLQTMVQEIQMSDEPRGGPTTLRAPRGRGREESLRAAVSSD HDVKKARQTWLLEDGDPSEGGFNQRNGPCQSSLNDGKQKSRAKKPGILRGIGYMFRFG KNRKDGVAPVENHPPVTNNAANERTPANNQIPSAALAAMERNAKLAPPAYQPPPPLPP ANANGTGGAHSDAMAAAMAAGIHQNDIFNHRYQHYSNYEELHNHHQQISDDNCSNSDV LSESTLECMRQQVLWQRLKVEAESRRHQHYHSQRSARSQDINMQQYAHSNHNHNHPMN HHASNNGKTPSLRSSNPNYYDYETAQHNLSQTSTANGNTSLNGSFQHRTGSIKQHNNG HITVNAAQQQHSQHSPAPSNGTQAQAHWKTAAMNGFSPASLNSSARSRGPFVTHVTLG PSSNSNNIAAGQQQPTYQTVQKHHHNLQHQQQQQQQQQQHGHSSQYASVGGGLAGPQQ HTTATASKV" ORIGIN 1 tttctcaacc gtcaaacgaa acggagggtc gcgcgcgatt ttttagtttt ttccgtctat 61 ccgtcaacgg aaaaatggaa aataaaatgt agttgaaact taagagtcaa atattacatc 121 aagacactcg tacgtggaat acaaaattgt atttaataaa atacgtaata tttttaacaa 181 cgaaattatg aaaatttaca ttagaaaata agttaaagtg accgacttgc aacgaaaagt 241 tataaagctt agtttagttc aagaatttac agcaacaata acgattacaa atacaacaaa 301 cgagagaaaa aacaatgtgc aaaaacacaa acaagtttgt atgatcgttg gagttttgtt 361 ggttgaaata cgaaagaagc ccagccatta acaacatggc cagcagcaag acaaacgaag 421 aaaacaaaaa gtagaaaaat gttaacaaat acaaattgaa aaagttatta aaaggccata 481 aacgagtgtt gttctttgta aaatgaatat aaaatcaaaa tttaatgatt gtgatgcaat 541 gcaaaatagt tgctgctaac ttctttttgg cccagtgtag atgattaagg tattaaggtg 601 ttgtgtggaa tacctcttgg aaaaaaataa ataaaataac aataagtgtg cttatttcta 661 ataaaatggt atgattcata gcaattacca tacaataaag taacttcaat tcgaaacaaa 721 ttccatcaag tgttagtttt acctgatacc aaaaacaaaa aaaaaacgcc aagaaattct 781 taaaagatta aagaggatca tcataatcat cttgttgatt attaaacaaa attacctttt 841 ctctctccca ttaaataata tggtgatctc tttctgacaa gtgcgtgtgt gagttgttta 901 acttaaaaat cttcttttgg tcttcatact ctccagccca agaagagata accacaagtg 961 tcctttaaga aacacacaaa aaaaacgaaa ataaaaacaa cgctctaacg accgaccgcg 1021 gcctcggcca agcattttac caacaacaaa gcaatacaaa caacaacgca gcagctaaga 1081 cctatccgca ttcttttgct ggggtttttg taaagagcaa ctaacatccc tgtgttatta 1141 gtgtgtcaac ggaaaacagt aacaagaaca acaacagcaa aatactactg caacatacga 1201 gtgaggcata cgagaactgt taacaatgca gctggcgttt atacagaata caagcaacaa 1261 caactacaac aaagtcgcgt ttttcctccc tctgtgtttt gttttgagca attgtaagca 1321 gcaccggtgt gacgggccac tagtgaagtg tgagtgagtg agttatgaaa aaacaacaac 1381 aacaacgcac gagacgacac aaaacgaaat tcccgataac tacagcacat atagtctctc 1441 acacaaacta aacaaaataa ttatagtaag aaaattacgc taaaaacgta tacaaaacat 1501 agtaaaaacg ccaaaaaaca caaaaagaat aaaataattt aaaataccgc agtagcaaca 1561 aacgtgttaa taataacaat aaatcgaacg aacaagtgtt ttgagagagt gatcattcca 1621 ttttttctaa agagagattt ccaaggcatt agcaataaga atttttcatc atgaaagtca 1681 ccgtgtgttt tggcgacact cgcatcctgg tgccctgtgg cgatggcaat ctattggtca 1741 aggaattaat tcatgaggca acaaggcgtt ataaaaaagc agctggaaag gatcccgatg 1801 cctgggtttc agtgcatcat ttacaaacac aatgcggcat attggatccc gacgactgtg 1861 tacgcgatgt agccgatgat cgtgaatata tacatgccag ctttgaagat tctggaccgg 1921 atccaggtgt accacagggt ggtggcgatg gtgcctcggg cagttcttcg gtgggcacag 1981 gatcgccgga tatctttcgg gatcccacca atacagatgc acccacaaat ggtggtcaca 2041 tagataattc gacacctcat attgaggtga caagtaccac ttcgtgtcct atgactggct 2101 tgggcctaca agtgaggcgc agcagtgatc ccaatatact ggcctccctt aaggcggcag 2161 aaaatggcaa taaacgttgg tcagcagcag caccccattg tggcggggat tctcccgagc 2221 gaatactaat ggagaaatcc ggttacttac caccccaatg ggaggaagag gatgatgggc 2281 atcatcaggc ccaacaagtg ccccagcaac agccttttgc ccgttccggc cgtttatcta 2341 tgcaattttt gggtgatggc accggctaca aatggataga ggctgccgag aaattgcaac 2401 aaaattcaca ccatcatcca cagcaaacgc cgcaacacca acaacactcc cagtctccgc 2461 aggcacaaac gaatttcttc accagcaaat ccctgccccg agagagcaca cgcaaggaac 2521 ccttgggcca ggcgtatgaa tccatacgtg aaaaggatgg cgaaatgctc ttactcatca 2581 atgagtatgg cagtcctttg ggcctgacgg ccatacccga caatgaacat ggtggaggtt 2641 tgcttgtgca acatgttgag cctggcagtc gcgctgagcg tggccgtttg cgcaaggggg 2701 atcgtatact ggaaatcaat ggcactaaac tcataggtct aaccgagctt aaagttcagg 2761 agtatttgcg caaagctttg gaagcttcgg aacttagggt gcgtgtaata cgaggcaatg 2821 cctcctcgaa agaagccaaa tatcgtcgac gcgactccaa ggtggcagaa atgatagagg 2881 ccgaagagaa aatggccacc ggcctggaga gtaaggtggc cacagtgtcg cctacaagaa 2941 aaccaaatac agcaccagtg ggtgcctcac tgcaagtggc caatacccga aaattgggta 3001 gaaaaattga aattattctt aagaagggcc aaaatggtct gggatttacc ataaccacac 3061 gcgataaccc ggccggggga cattgtccca tttacattaa aaatattttg cctcgaggag 3121 cagcaattga agatggtaga ctaagacctg gcgatcgttt gttggaagtc gatggtatac 3181 tgatgactgg aaaaacacaa accgatgtgg tgtccatatt gagagctaca caaccaggag 3241 caactgttag actgatggta tccaggcaac atgatttggc agagccagag gaaagggaga 3301 ttaattttga aaacaaggaa aatgagtttg attctccccc caaaccccca gccccagttc 3361 taccagcctc catgcaaacc cctcaacatg aggtcaagaa atcccaaagt gcccgttccc 3421 tattcgagca acatcaacag cagcaacatc ataatctcaa tgaatcccaa catttcattg 3481 atgccggcag tgaatcggca gcttcaagtg atagcttaca agctggtgtt gcctggcgtt 3541 cccgcgaaat gcttaccttc cacatacccg ttcatgatac cgaaaaggct ggccttggtg 3601 ttagtgtcaa aggcaagaca agttccaatt tgacgggctc ctcaaatggc agttccaatg 3661 gatcaatgaa aaacgatggt gacttgggta tttttgtaaa aagtgtcata catggtggtg 3721 ctgcatcacg tgatggccgt ttacgcatga atgaccaact ggttagcatt aatggtgtta 3781 gcctacttgg ccagagtaat gccgaggcca tggatacact gaaacgtgcc attgtcaata 3841 atccgggtaa acatccggga atgattaccc tacaggttgc tcgaaaaata actcgttcct 3901 ccagttcggg tgatatactg gagcatacca acgaaagctc gagtaccagt gagaatagtg 3961 gagccactgt catctatttg agcccggaga agagaaatag tgacatcaat cgtcataata 4021 atggtgcttc ggcaacaaac gatatgaata gatggagcaa ccccgtttta gatcgcctaa 4081 ctggtggtgc ttgctctgga aattctacac aaaaaagccg ttcaaatgct gctggcccct 4141 cggctgtcac tgtcttgagt agcagtggca aaactcctgg aggtggtggt ggtgccaata 4201 gtggtgttca tgctctacgc aatgagagct attatatggc cacaaatgat acttggtcac 4261 cagccatgca tcacacacag aagcatatca ataattcggt attgatagaa catgatccgg 4321 aacccatatc acccacgtta ccccatcgcc ctaacgaatc tttagcctcc accattacca 4381 acaacacttc gggctcaaat gccacccctc aaccaggtgg tgggccgcaa aactttgatg 4441 ccacctattc atcacagcta agtctcgaaa caaattctgg agtcgaacac tttagccgtg 4501 atgccttagg tcgacgttcc atatcggaaa aacatcatgc ggccctggat gcccgagaaa 4561 cgggcaccta tcaacgtaat aagaaattgc gtgaggaacg agaacgaaga gtggctcaaa 4621 ccaaatcggc tgtttatggt tctatggaat cattaacagc aagaattgct gaggccaatg 4681 cccgcatacc aggctataaa catgccaaaa ccaattcggg catagaacag caacatatgc 4741 aggcggagtc tagggatcaa gtgggtgatt tgggaccatc gctgggtctg aagaaatcct 4801 catcgctgga atctctgcag accatggtgc aagagataca aatgtccgat gagcctagag 4861 gaggtcccac caccttacgg gccccacgtg gtcgagggcg tgaagagagt ctgagggcag 4921 cggtatccag tgatcatgat gttaagaaag cccgtcaaac ttggcttttg gaagatggcg 4981 acccctctga aggtggcttt aatcaacgca atggtccctg ccaatcatcc cttaatgatg 5041 gcaaacaaaa gtcccgcgcc aagaagcctg gcattttgcg aggcattggc tatatgtttc 5101 gttttggcaa aaatcgcaaa gatggtgtag cgcctgtgga aaatcatcct cccgtgacca 5161 ataatgcagc aaatgaaaga acacctgcca ataatcaaat accatcagct gccttggcgg 5221 ctatggagcg caatgccaaa ttggcaccac cagcctacca acctccgccg ccattgccac 5281 cagccaatgc caatggcaca ggtggggcgc atagtgatgc tatggcagct gccatggctg 5341 ctggtatcca tcaaaacgat atctttaatc atcgctatca acactattcg aattatgaag 5401 agttacacaa tcatcatcaa caaattagcg atgataactg ctcaaatagt gatgttttat 5461 cggaatcaac cttagaatgc atgcgacaac aagtgctttg gcaacgtctt aaagtcgaag 5521 cggaaagtcg acgtcatcaa cattatcact ctcaacgcag cgcgcgctcg caggacatca 5581 atatgcaaca atatgcgcat agcaatcata atcacaacca ccccatgaat caccatgcca 5641 gcaataatgg caagacaccc agtttgcgtt cttcaaatcc caactattac gattatgaga 5701 cggcacaaca taatttaagt caaacatcga cggcgaatgg caatacatca ctcaatggta 5761 gttttcaaca tcgcacggga agcataaaac aacataataa tggtcatata acggtcaatg 5821 ctgcgcagca acaacattcc caacactcgc cggctccatc caatggtaca caggcgcagg 5881 ctcattggaa gacagcagcc atgaatggct tttcgccggc ctccctcaac agcagtgctc 5941 gctcgcgagg cccctttgtg acccatgtga ctttgggccc ctcatcgaat agcaataaca 6001 tagctgccgg gcagcaacag ccaacatatc aaacggttca aaagcatcat cataatctgc 6061 agcatcaaca gcagcaacag cagcagcagc aacaacatgg ccatagctcc caatatgcaa 6121 gtgtgggcgg tggcctggct ggtccccagc agcacacaac ggccaccgca tcaaaagtgt 6181 gactataggc aaacgttctt cgccagtgtc tgggcgaaga cgttgtggta cgtggtataa 6241 gcagcaaaac gaaaataaca acctctactt catcaacgag caaaagtaaa atgaaaacag 6301 caattccttg tacctcagca gaggcagcag cattagcggt ggggggatgt gctggagcaa 6361 aaggtaggga gaacactgaa caagttgaga aaaaagaaca attcaaggat ttgcctggag 6421 gccaaacaac gcccataacg tctagagagg gaaacggtga cgatgacgaa gaggatgagg 6481 atatagtgga aattttctat tttgccaccg aatgttgaaa actttgtata acactctctc 6541 accttattct ctctcgctct ctctctctct cacactctct gagtctcgta tgagaacaac 6601 gaaaccccta agggaggtat gggtaaaagg atcaaatgtt taagttaaaa atgttttgtg 6661 gtgagattgt tttattttct taattat