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LOCUS XM_013246137 5766 bp mRNA linear INV 02-SEP-2023 (LOC106083231), transcript variant X1, mRNA. ACCESSION XM_013246137 VERSION XM_013246137.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013246137.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5766 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5766 /gene="LOC106083231" /note="partitioning defective 3 homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106083231" CDS 690..5261 /gene="LOC106083231" /codon_start=1 /product="partitioning defective 3 homolog isoform X1" /protein_id="XP_013101591.2" /db_xref="GeneID:106083231" /translation="MFDLPPKCPALANKLTGIFGWRHTYKVSAKHEGIQHSYLQKSYS LTLPTKRPPSPYGYIKDPDAWVSVHHLQTQCGILDPDDCVRDVADDREYIHASFEDSG PDPGVPQGGGDGASGSSSVGTGSPDIFRDPTNTDAPTNGGHIDNSTPHIEVTSTTSCP MTGLGLQVRRSSDPNILASLKAAENGNKRWSAAAPHCGGDSPERILMEKSGYLPPQWE EEDDGHHQAQQVPQQQPFARSGRLSMQFLGDGTGYKWIEAAEKLQQNSHHHPQQTPQH QQHSQSPQAQTNFFTSKSLPRESTRKEPLGQAYESIREKDGEMLLLINEYGSPLGLTA IPDNEHGGGLLVQHVEPGSRAERGRLRKGDRILEINGTKLIGLTELKVQEYLRKALEA SELRVRVIRGNASSKEAKYRRRDSKVAEMIEAEEKMATGLESKVATVSPTRKPNTAPV GASLQVANTRKLGRKIEIILKKGQNGLGFTITTRDNPAGGHCPIYIKNILPRGAAIED GRLRPGDRLLEVDGILMTGKTQTDVVSILRATQPGATVRLMVSRQHDLAEPEEREINF ENKENEFDSPPKPPAPVLPASMQTPQHEVKKSQSARSLFEQHQQQQHHNLNESQHFID AGSESAASSDSLQAGVAWRSREMLTFHIPVHDTEKAGLGVSVKGKTSSNLTGSSNGSS NGSMKNDGDLGIFVKSVIHGGAASRDGRLRMNDQLVSINGVSLLGQSNAEAMDTLKRA IVNNPGKHPGMITLQVARKITRSSSSGDILEHTNESSSTSENSGATVIYLSPEKRNSD INRHNNGASATNDMNRWSNPVLDRLTGGACSGNSTQKSRSNAAGPSAVTVLSSSGKTP GGGGGANSGVHALRNESYYMATNDTWSPAMHHTQKHINNSVLIEHDPEPISPTLPHRP NESLASTITNNTSGSNATPQPGGGPQNFDATYSSQLSLETNSGVEHFSRDALGRRSIS EKHHAALDARETGTYQRNKKLREERERRVAQTKSAVYGSMESLTARIAEANARIPGYK HAKTNSGIEQQHMQAESRDQVGDLGPSLGLKKSSSLESLQTMVQEIQMSDEPRGGPTT LRAPRGRGREESLRAAVSSDHDVKKARQTWLLEDGDPSEGGFNQRNGPCQSSLNDGKQ KSRAKKPGILRGIGYMFRFGKNRKDGVAPVENHPPVTNNAANERTPANNQIPSAALAA MERNAKLAPPAYQPPPPLPPANANGTGGAHSDAMAAAMAAGIHQNDIFNHRYQHYSNY EELHNHHQQISDDNCSNSDVLSESTLECMRQQVLWQRLKVEAESRRHQHYHSQRSARS QDINMQQYAHSNHNHNHPMNHHASNNGKTPSLRSSNPNYYDYETAQHNLSQTSTANGN TSLNGSFQHRTGSIKQHNNGHITVNAAQQQHSQHSPAPSNGTQAQAHWKTAAMNGFSP ASLNSSARSRGPFVTHVTLGPSSNSNNIAAGQQQPTYQTVQKHHHNLQHQQQQQQQQQ QHGHSSQYASVGGGLAGPQQHTTATASKV" ORIGIN 1 cagctaataa tccacttaca aagcatgcat tcaaatgtca atttctttct ctttctcttt 61 ccgcttccgt tactctttag tgggcttgtt ttgagtttct ctttgacttg ttggttatgg 121 ttcgcttgct agatggcttg ctggctgact tgactgactg ttgcttgtgg gagacacaag 181 ccattcaagt ttagtttcat ttcaaacacg ctctcgtaac gaccgtttta tttattttta 241 ttcttttgtt tgttaacaaa aaaagaagaa atacaaaaaa taacaaaaca aaaacgcgaa 301 gcggtagatt ttgtaagaat agaaaaaatc atatgaatca cttaaaaacg tatataacat 361 ataacgaaaa taaaaaacgt ctttttataa aaaaagaaat atataaaaat atgaaaaata 421 aaaaacggaa gtttttttaa caaaaataag tgcttcaata actaaactcg tagtattgtt 481 ttataaattt aaaaaataca agacatacta aggaaaatcc aaaaaaaaaa tcctttagat 541 aaaatgactt aatcaacgaa tatctccccc ccaaaaaaca tacaaatgaa aagtattatt 601 aatttaaatt taaaaaaaaa aaccaacaac aataccaact accaaagatt taatcaaata 661 acatcaccat aaccttcgtt attatcatca tgttcgattt acctccaaaa tgtccggctt 721 tggctaataa attgacgggc atttttggtt ggcgtcatac ctacaaagtt tcggccaaac 781 atgaaggcat ccaacattcc tatttacaaa aatcctattc tctaacattg cccacaaaga 841 ggccaccctc gccatatggt tatataaagg atcccgatgc ctgggtttca gtgcatcatt 901 tacaaacaca atgcggcata ttggatcccg acgactgtgt acgcgatgta gccgatgatc 961 gtgaatatat acatgccagc tttgaagatt ctggaccgga tccaggtgta ccacagggtg 1021 gtggcgatgg tgcctcgggc agttcttcgg tgggcacagg atcgccggat atctttcggg 1081 atcccaccaa tacagatgca cccacaaatg gtggtcacat agataattcg acacctcata 1141 ttgaggtgac aagtaccact tcgtgtccta tgactggctt gggcctacaa gtgaggcgca 1201 gcagtgatcc caatatactg gcctccctta aggcggcaga aaatggcaat aaacgttggt 1261 cagcagcagc accccattgt ggcggggatt ctcccgagcg aatactaatg gagaaatccg 1321 gttacttacc accccaatgg gaggaagagg atgatgggca tcatcaggcc caacaagtgc 1381 cccagcaaca gccttttgcc cgttccggcc gtttatctat gcaatttttg ggtgatggca 1441 ccggctacaa atggatagag gctgccgaga aattgcaaca aaattcacac catcatccac 1501 agcaaacgcc gcaacaccaa caacactccc agtctccgca ggcacaaacg aatttcttca 1561 ccagcaaatc cctgccccga gagagcacac gcaaggaacc cttgggccag gcgtatgaat 1621 ccatacgtga aaaggatggc gaaatgctct tactcatcaa tgagtatggc agtcctttgg 1681 gcctgacggc catacccgac aatgaacatg gtggaggttt gcttgtgcaa catgttgagc 1741 ctggcagtcg cgctgagcgt ggccgtttgc gcaaggggga tcgtatactg gaaatcaatg 1801 gcactaaact cataggtcta accgagctta aagttcagga gtatttgcgc aaagctttgg 1861 aagcttcgga acttagggtg cgtgtaatac gaggcaatgc ctcctcgaaa gaagccaaat 1921 atcgtcgacg cgactccaag gtggcagaaa tgatagaggc cgaagagaaa atggccaccg 1981 gcctggagag taaggtggcc acagtgtcgc ctacaagaaa accaaataca gcaccagtgg 2041 gtgcctcact gcaagtggcc aatacccgaa aattgggtag aaaaattgaa attattctta 2101 agaagggcca aaatggtctg ggatttacca taaccacacg cgataacccg gccgggggac 2161 attgtcccat ttacattaaa aatattttgc ctcgaggagc agcaattgaa gatggtagac 2221 taagacctgg cgatcgtttg ttggaagtcg atggtatact gatgactgga aaaacacaaa 2281 ccgatgtggt gtccatattg agagctacac aaccaggagc aactgttaga ctgatggtat 2341 ccaggcaaca tgatttggca gagccagagg aaagggagat taattttgaa aacaaggaaa 2401 atgagtttga ttctcccccc aaacccccag ccccagttct accagcctcc atgcaaaccc 2461 ctcaacatga ggtcaagaaa tcccaaagtg cccgttccct attcgagcaa catcaacagc 2521 agcaacatca taatctcaat gaatcccaac atttcattga tgccggcagt gaatcggcag 2581 cttcaagtga tagcttacaa gctggtgttg cctggcgttc ccgcgaaatg cttaccttcc 2641 acatacccgt tcatgatacc gaaaaggctg gccttggtgt tagtgtcaaa ggcaagacaa 2701 gttccaattt gacgggctcc tcaaatggca gttccaatgg atcaatgaaa aacgatggtg 2761 acttgggtat ttttgtaaaa agtgtcatac atggtggtgc tgcatcacgt gatggccgtt 2821 tacgcatgaa tgaccaactg gttagcatta atggtgttag cctacttggc cagagtaatg 2881 ccgaggccat ggatacactg aaacgtgcca ttgtcaataa tccgggtaaa catccgggaa 2941 tgattaccct acaggttgct cgaaaaataa ctcgttcctc cagttcgggt gatatactgg 3001 agcataccaa cgaaagctcg agtaccagtg agaatagtgg agccactgtc atctatttga 3061 gcccggagaa gagaaatagt gacatcaatc gtcataataa tggtgcttcg gcaacaaacg 3121 atatgaatag atggagcaac cccgttttag atcgcctaac tggtggtgct tgctctggaa 3181 attctacaca aaaaagccgt tcaaatgctg ctggcccctc ggctgtcact gtcttgagta 3241 gcagtggcaa aactcctgga ggtggtggtg gtgccaatag tggtgttcat gctctacgca 3301 atgagagcta ttatatggcc acaaatgata cttggtcacc agccatgcat cacacacaga 3361 agcatatcaa taattcggta ttgatagaac atgatccgga acccatatca cccacgttac 3421 cccatcgccc taacgaatct ttagcctcca ccattaccaa caacacttcg ggctcaaatg 3481 ccacccctca accaggtggt gggccgcaaa actttgatgc cacctattca tcacagctaa 3541 gtctcgaaac aaattctgga gtcgaacact ttagccgtga tgccttaggt cgacgttcca 3601 tatcggaaaa acatcatgcg gccctggatg cccgagaaac gggcacctat caacgtaata 3661 agaaattgcg tgaggaacga gaacgaagag tggctcaaac caaatcggct gtttatggtt 3721 ctatggaatc attaacagca agaattgctg aggccaatgc ccgcatacca ggctataaac 3781 atgccaaaac caattcgggc atagaacagc aacatatgca ggcggagtct agggatcaag 3841 tgggtgattt gggaccatcg ctgggtctga agaaatcctc atcgctggaa tctctgcaga 3901 ccatggtgca agagatacaa atgtccgatg agcctagagg aggtcccacc accttacggg 3961 ccccacgtgg tcgagggcgt gaagagagtc tgagggcagc ggtatccagt gatcatgatg 4021 ttaagaaagc ccgtcaaact tggcttttgg aagatggcga cccctctgaa ggtggcttta 4081 atcaacgcaa tggtccctgc caatcatccc ttaatgatgg caaacaaaag tcccgcgcca 4141 agaagcctgg cattttgcga ggcattggct atatgtttcg ttttggcaaa aatcgcaaag 4201 atggtgtagc gcctgtggaa aatcatcctc ccgtgaccaa taatgcagca aatgaaagaa 4261 cacctgccaa taatcaaata ccatcagctg ccttggcggc tatggagcgc aatgccaaat 4321 tggcaccacc agcctaccaa cctccgccgc cattgccacc agccaatgcc aatggcacag 4381 gtggggcgca tagtgatgct atggcagctg ccatggctgc tggtatccat caaaacgata 4441 tctttaatca tcgctatcaa cactattcga attatgaaga gttacacaat catcatcaac 4501 aaattagcga tgataactgc tcaaatagtg atgttttatc ggaatcaacc ttagaatgca 4561 tgcgacaaca agtgctttgg caacgtctta aagtcgaagc ggaaagtcga cgtcatcaac 4621 attatcactc tcaacgcagc gcgcgctcgc aggacatcaa tatgcaacaa tatgcgcata 4681 gcaatcataa tcacaaccac cccatgaatc accatgccag caataatggc aagacaccca 4741 gtttgcgttc ttcaaatccc aactattacg attatgagac ggcacaacat aatttaagtc 4801 aaacatcgac ggcgaatggc aatacatcac tcaatggtag ttttcaacat cgcacgggaa 4861 gcataaaaca acataataat ggtcatataa cggtcaatgc tgcgcagcaa caacattccc 4921 aacactcgcc ggctccatcc aatggtacac aggcgcaggc tcattggaag acagcagcca 4981 tgaatggctt ttcgccggcc tccctcaaca gcagtgctcg ctcgcgaggc ccctttgtga 5041 cccatgtgac tttgggcccc tcatcgaata gcaataacat agctgccggg cagcaacagc 5101 caacatatca aacggttcaa aagcatcatc ataatctgca gcatcaacag cagcaacagc 5161 agcagcagca acaacatggc catagctccc aatatgcaag tgtgggcggt ggcctggctg 5221 gtccccagca gcacacaacg gccaccgcat caaaagtgtg actataggca aacgttcttc 5281 gccagtgtct gggcgaagac gttgtggtac gtggtataag cagcaaaacg aaaataacaa 5341 cctctacttc atcaacgagc aaaagtaaaa tgaaaacagc aattccttgt acctcagcag 5401 aggcagcagc attagcggtg gggggatgtg ctggagcaaa aggtagggag aacactgaac 5461 aagttgagaa aaaagaacaa ttcaaggatt tgcctggagg ccaaacaacg cccataacgt 5521 ctagagaggg aaacggtgac gatgacgaag aggatgagga tatagtggaa attttctatt 5581 ttgccaccga atgttgaaaa ctttgtataa cactctctca ccttattctc tctcgctctc 5641 tctctctctc acactctctg agtctcgtat gagaacaacg aaacccctaa gggaggtatg 5701 ggtaaaagga tcaaatgttt aagttaaaaa tgttttgtgg tgagattgtt ttattttctt 5761 aattat