Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans nucleic acid dioxygenase ALKBH1


LOCUS       XM_013246093            1430 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106083207), transcript variant X1, mRNA.
ACCESSION   XM_013246093
VERSION     XM_013246093.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013246093.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1430
                     /gene="LOC106083207"
                     /note="nucleic acid dioxygenase ALKBH1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:106083207"
     CDS             223..1284
                     /gene="LOC106083207"
                     /codon_start=1
                     /product="nucleic acid dioxygenase ALKBH1"
                     /protein_id="XP_013101547.1"
                     /db_xref="GeneID:106083207"
                     /translation="MFKESFKYYKSKWPIPNLTSVIDFRERGVNEIQELHLNDCDCAS
                     LGLPLGLNPVHCWRIFTLNSHPGLLIIRHAFTTLGQRYWMARSLKDYPKAPNRVNLNE
                     RLFQKSVLDDWWFSLQSCEDKDESRRMKISMRWTTLGYHHDWDTKIYSEDLHTKFPED
                     LSKLSSFFANILGYNDYQAQAAIVNYYPIGTTLAGHTDHSEQNLEAPLFSFSFGQTAI
                     FLIGGKTREEKPTALFIESGDVLVMSKESRLCYHAVPRVMKAREETWNCLIESTQPKE
                     SSVEPPVQPSKRLRTEVPCIDSRETSAALEWAMDPILYNQVADEIFWSPFKSYLHDSR
                     INLNVRQVLHRNRTTLNGH"
     misc_feature    421..999
                     /gene="LOC106083207"
                     /note="2OG-Fe(II) oxygenase superfamily; Region:
                     2OG-FeII_Oxy_2; pfam13532"
                     /db_xref="CDD:433285"
     polyA_site      1430
                     /gene="LOC106083207"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgtgtttaat ctccaaaaag ttattattat tttaatatta tttatttcat aaaaggaagc
       61 agtgttattt acattatatt ttttttgcga atattattca acaaggaagt tttgatagtc
      121 tatcaacaga atataccact aaatttccca tgaacattcc attaaggaac aagggaacag
      181 aattatagaa actaaaatta aacctatctg atggtataag taatgtttaa ggaaagcttt
      241 aaatactata agtcaaagtg gcccatacca aatttaacaa gcgttattga ttttcgagag
      301 agaggagtca atgagattca ggaattacat ttgaacgact gtgattgcgc ttcattggga
      361 ttgcctttgg gacttaatcc agttcattgt tggcgtatat ttacactcaa ttcccatccc
      421 ggtttgctaa tcatacgtca tgccttcacc acactgggtc aacgctattg gatggcgcgc
      481 agcctaaaag attatcccaa agctccgaat cgtgtcaatt taaatgaacg actgtttcaa
      541 aagtctgtgc ttgatgactg gtggttttcc ctgcaaagtt gtgaggacaa agatgaatcg
      601 agaagaatga aaatatccat gaggtggacc acattgggct atcaccatga ttgggacacc
      661 aaaatttata gcgaagattt acatacgaaa tttcctgaag acttatcaaa gttaagcagt
      721 ttctttgcca acattctagg ctataatgat tatcaagcac aagctgcaat tgttaattat
      781 tatccaatag gaactacctt agctgggcat acggaccatt cagagcagaa tttagaagca
      841 ccactatttt cttttagttt cggtcaaaca gcgatatttc ttattggagg aaaaacgaga
      901 gaagaaaaac caacagcact ttttattgaa agtggcgatg tgctggtcat gtccaaagaa
      961 tcccgtttat gctaccacgc agtacctagg gtaatgaaag cccgtgagga aacttggaat
     1021 tgtttaatag aatccacaca accaaaggaa tcaagcgtgg aaccaccagt gcaaccttct
     1081 aaacgtttac gtaccgaagt tccttgtata gatagcagag agactagtgc agccctcgaa
     1141 tgggctatgg acccaatttt atacaatcaa gtggcagacg aaattttttg gtcacctttc
     1201 aaaagttatt tacacgattc ccgcataaat cttaacgtta ggcaggtact tcatcgaaat
     1261 cgtacaacat taaatggcca ttgaacgaca acccatatct gctgacacat ttagatgata
     1321 accattgttt gctatctata tagttattaa attacaataa tttaacaaaa ttacaaacaa
     1381 ttttaagtaa agctaaaata aacaatttta aaaatttgca aaaacgaaaa