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LOCUS XM_013246035 5130 bp mRNA linear INV 02-SEP-2023 (LOC106083102), mRNA. ACCESSION XM_013246035 VERSION XM_013246035.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq; includes ab initio. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013246035.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 30% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..5130 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5130 /gene="LOC106083102" /note="uncharacterized LOC106083102; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins" /db_xref="GeneID:106083102" CDS 50..5035 /gene="LOC106083102" /codon_start=1 /product="uncharacterized protein LOC106083102" /protein_id="XP_013101489.2" /db_xref="GeneID:106083102" /translation="MDYNIDLKDCGKILKNQTQYLLRCGDCNGDFYNFEDFVIHHSER HSLQDKNDERPGKDDDECEIKYSKQEHFIPQHNEEEVITMRTRQMTKQQCTEDVFKGI DDTKSNDDKEFLKIEPMMFVEVEQAKEDESDESDEDENEDDENEFKGEDIKCKKFVSE FLASEENYITFIEAYKKQPQLWNYKLYPVLCTQKDRAIYFIEIEKEIQERLNVQMSHE YVRATISSIRIRYREKSKKLAARKEKKGESSVLKSVPTWYFEKLQFLEPFLSKESIFK LDPELPDMTQEQVIKIIHMYKKLPNLWNTNLLEIYCKNKREECLKQLAKEIHAEVGLE VSEFSLQRYLNELQKSFYNEKAEVLRNKADPQTTQSVYYKEMAFLDDHVGPFKCSQCA CKYRGPLQLKVHTFQKHNGKRLSCPECGKEYELLVPYITHARRHMNDMSVKCPQCDKM FLRQGYMKVHLRTHTGDRPYSCEICGASFSNATAIREHRERHSKEFQFFCPICSKGFY SKKNMKKHILIHSDVKKYPCNICGKAFRTRIAMRSHETSHEKGRKYPCPKCGNMYKNE NSVAQHIRKSHRELVKTNPFINDHVEEAEMCHETKFNIQCLFEVHTAVSYKHNFVNKL TEPTTSYKAMDYNLDLRNCGKILRTPTQYLLRCGDCNEDFYIFGDFITHHSKLHCLQD KDVDSPDEDDAEDYLDECEIEYCSELNDIPEHDADEMIGTQSRHRMKQQCTKDIFQEI ADGESIHDEEFVNIEPMPFMEDEKAKENDSAEYFESDEDGFKDEDIKCRKFVSEFLDS EENYLAFIDAYENQPRLWNYKLYPVLCTKQDRAVYFAEIAEEIHNRLNIQMSEDYVRA IIYRIRTKYREKSKKLADRKEREGGSPKLATVPTWYFQKLQFLEPFLSKESIFKLDPK LPNMTQEQVIELIHMYEMFPNLWNTNLLENVCKNKRDESLKQLAAVIHSETGLEVSEF SLQRYLNELQKCFYNEKAKMLRRKVDSQINSSIYYKEMFFLYDHVGPFKCPQCPSKYR GPLLLKVHKTQKHNGDRLSCPQCGKQYEQLEPYITHARRHMNDLNVECPQCDKMFLRK ADMRIHLRTHTGDRPYSCEICGATFSNPTAIREHRERHIKEIKFHCPKIAMEKYADYL RCGEIYKSPSHSNKTPYILKCYQCADIFLLLESFIFHIEDYCNADQQNDAVTVVIDEQ QEPKEDIENIEECDDASVMVKNEPIKDIEYEEIVMVEDSGNVSVTPEGGSSTDDADEG CEGFVVYEIVDISDAENDSKKPADNPVPSFVSKFMESRTNVIELIAMYKRFYLNSGSA ISTGLKLEPHDLEKLTVNFNAKRRLNLTSSQIGAIIYHLHHEYSQYLKDTNDNKGSDT TSKPSWYFQFLNFLDTTKEKSLYEIEDYPTKLSKDIILKILDIYKDFPQLWDTELVEY CCNNKRREALEAMLEALKAKIALKLNLNSLKKYLQSIHSFYQKEKKNHMSGTEFTLPS SEISHKDMEFLSAHVGPFQCPYCDVEIKCPFSLKIHKFSSHGGCIPFNCSLCRKQFRT SNLYIYHAKWHMNDLTIECKLCNKKFINASELKTHMVSHNQQKSFKSLQPDLKSTNMS TTDVANKRFKTTPVKNTNSITLRGFHKCSECGIAFRMSKSLHNHMQLHRKM" polyA_site 5130 /gene="LOC106083102" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgctaattga acatactcca ttcaaataga cactttaact tgtaaaaaca tggactacaa 61 catagattta aaagattgtg gcaaaatatt aaaaaaccaa acacaatatc ttctgagatg 121 tggtgattgt aatggtgatt tctataactt cgaggatttt gtaattcatc actctgagcg 181 gcattcgttg caagataaga acgatgaaag gccaggcaaa gacgatgacg aatgtgagat 241 caaatattcc aagcaggagc atttcattcc acaacataat gaagaagagg tgattactat 301 gcgtactcgt cagatgacga aacaacaatg taccgaggat gtctttaaag ggattgatga 361 tactaaaagt aacgatgata aggagttctt gaagattgaa ccgatgatgt ttgtagaagt 421 tgaacaagca aaagaggacg aaagtgatga atcggatgaa gatgaaaatg aagatgatga 481 aaatgagttt aaaggcgagg acataaaatg caaaaaattt gtttccgaat ttctagcgtc 541 tgaagaaaac tatattactt ttatagaggc gtacaaaaaa caacctcagt tatggaacta 601 taaactctat cccgttttat gtacccaaaa agatcgggca atttatttca ttgaaattga 661 aaaggaaata caggaacgat taaatgtaca aatgtcacac gaatatgttc gtgcaacaat 721 tagtagtatt cgaattaggt accgagaaaa atcgaaaaaa ttggcagccc gcaaagagaa 781 gaaaggggag agctcagtgt taaaatctgt acctacatgg tattttgaaa aattgcaatt 841 tttagaaccc tttctaagca aggaatccat ttttaaacta gatccagaac tgccagatat 901 gacgcaagag caagtaataa aaataattca tatgtacaaa aagttaccga atttgtggaa 961 cacaaaccta ttagagatat attgcaaaaa taaacgagaa gaatgcttaa agcaattggc 1021 gaaggagata cacgcggaag tcggtttgga agtcagtgaa ttttctttgc aaagatattt 1081 aaatgaattg caaaaaagtt tctacaacga aaaggctgaa gtgcttcgaa ataaagcgga 1141 cccccaaaca acacaatctg tttactataa agaaatggct ttccttgatg accatgtggg 1201 accttttaaa tgctctcagt gcgcttgtaa atatcgaggt ccgcttcaat tgaaagtaca 1261 tacatttcaa aagcataacg gtaaacgctt gtcgtgtcct gaatgtggca aggagtatga 1321 actgttagta ccatacataa cgcatgccag gcgtcatatg aacgacatga gtgtaaaatg 1381 tcctcaatgc gataaaatgt ttttaaggca aggatatatg aaggtacatt tgcgaaccca 1441 taccggagat cgaccttatt cctgtgaaat atgtggtgct tcattttcga atgcgactgc 1501 catacgcgag catagagaga gacatagcaa agaatttcaa tttttttgtc cgatttgctc 1561 caaaggcttt tacagcaaga aaaatatgaa aaaacacatc cttatacact cagatgtaaa 1621 gaaatatcct tgcaatattt gcggaaaagc ctttagaacc agaattgcta tgaggagtca 1681 tgaaaccagt cacgaaaaag gtcgtaaata tccatgtcca aagtgtggta atatgtacaa 1741 gaatgaaaac agtgtagctc agcacataag aaaatcacat cgagaacttg ttaaaactaa 1801 tccgtttatc aatgaccatg tagaagaggc agaaatgtgc catgaaacca aatttaatat 1861 ccaatgcctg tttgaggtgc atacagctgt ttcctataaa cacaattttg taaacaaact 1921 cactgaacca acaacctctt ataaagccat ggactacaat ttggacctga gaaattgtgg 1981 aaaaatatta agaactccaa cccaatatct tctgcgatgt ggcgattgca atgaagattt 2041 ctatatcttt ggggacttta taacacatca ttccaagctc cattgtttgc aggataagga 2101 cgttgatagt ccagacgaag atgatgccga agactatttg gatgaatgtg agatcgaata 2161 ctgcagtgaa ctgaatgaca ttcctgaaca tgatgcagat gaaatgattg gtactcaaag 2221 ccgtcataga atgaaacaac aatgcaccaa agacattttt caagaaattg ccgacggcga 2281 aagcattcat gacgaggagt tcgtgaatat tgagcccatg ccttttatgg aagatgaaaa 2341 agccaaggag aacgatagtg ctgaatattt tgaatctgat gaagatgggt tcaaagacga 2401 ggacattaaa tgcagaaaat tcgtttccga atttctagat tccgaagaaa actatcttgc 2461 ttttatagac gcctatgaaa atcaaccccg cttatggaac tataaactct atcccgtttt 2521 atgtacaaaa caagatcgag ctgtatattt cgccgaaatt gcagaagaaa tacataatcg 2581 actgaatata caaatgtcgg aagattacgt tcgtgctata atttatcgta ttcgaactaa 2641 gtaccgggaa aaatcgaaaa aattagcaga ccgcaaagaa cgagaaggag ggagtccaaa 2701 gttagcaacc gtacctacat ggtattttca aaaattgcaa tttttagagc ccttcctaag 2761 caaggagtca atctttaaat tggatccaaa acttccaaat atgacacagg agcaagtgat 2821 agaattaatt catatgtacg aaatgtttcc gaatttatgg aacacaaacc tattggagaa 2881 tgtttgcaaa aataaacgag atgaatcttt aaagcagctg gcggctgtga tacattcaga 2941 gactggttta gaggtcagtg aattttcttt acaacgatac ttaaatgaat tacaaaaatg 3001 cttctacaac gaaaaggcta aaatgttgcg aagaaaagtg gactcacaaa tcaattcatc 3061 tatttactat aaggaaatgt tcttcctgta tgaccacgtg ggaccattta aatgtcctca 3121 atgccctagt aaatatcgag gcccactgct attaaaagtg cataaaacac aaaagcataa 3181 cggtgatcgt ttgtcatgtc cccaatgtgg caagcaatat gagcagttgg aaccgtatat 3241 aacgcatgcc aggcggcaca tgaacgactt gaatgtggaa tgtcctcaat gtgataaaat 3301 gtttttaaga aaagcagata tgagaataca tttgcgaacc cacaccggag atcggcctta 3361 ttcctgtgaa atatgtggtg ctacattttc gaatccgact gctatacgag agcatagaga 3421 gagacatatc aaagaaataa aattccattg tccgaaaata gcaatggaaa aatatgcgga 3481 ctatttgaga tgtggggaga tatacaaatc tccctcgcat tcgaataaaa ctccatatat 3541 tttaaaatgc tatcagtgtg ctgacatatt cctattgctg gagtcgttca tatttcatat 3601 cgaggattat tgcaatgcag accaacaaaa tgatgcagtc actgttgtca tagatgaaca 3661 gcaagagcca aaggaagata ttgaaaatat tgaagaatgt gatgatgctt cggtcatggt 3721 aaagaacgaa cctatcaaag acattgagta tgaggaaatc gttatggtag aggatagtgg 3781 gaatgtatct gttacgccag agggaggatc aagtacagat gatgccgatg agggatgcga 3841 aggtttcgtg gtctatgaga tagtggatat aagtgatgct gagaatgaca gtaaaaaacc 3901 cgccgataat cctgtaccat ctttcgtttc aaaattcatg gaatcacgta caaatgtcat 3961 cgaactaata gcaatgtata agagattcta tttgaatagt ggatcagcaa taagcacagg 4021 attaaaattg gaaccgcatg atttagaaaa gctaactgta aacttcaatg ccaagcgtcg 4081 tttgaatctt acttcgtcac aaattggtgc catcatttat catttgcacc atgaatacag 4141 ccaatatcta aaggatacaa acgataacaa aggatcggat actactagta agccttcttg 4201 gtattttcag tttttgaatt ttttagacac gaccaaagag aaaagcttat atgaaatcga 4261 agactatcct acgaagttgt ctaaagacat aattctaaaa attctagata tatataagga 4321 ctttcctcag ttatgggaca cagaattagt cgaatattgt tgcaataata aacgacgtga 4381 agctcttgag gcaatgttgg aagctcttaa agcgaaaata gccttaaaac tgaatctgaa 4441 ctcactgaaa aagtatttgc aatccattca tagcttttac cagaaagaaa agaaaaatca 4501 tatgagcggc acggaattca cactgccgtc gtcagagata tcccataaag atatggaatt 4561 tctctcagct catgtgggtc cctttcaatg tccatattgt gatgtcgaaa taaaatgccc 4621 tttctcattg aaaatacata aatttagttc ccatggtgga tgcatacctt ttaactgttc 4681 cctgtgtcgc aagcaattcc gtacttcaaa cctgtacata tatcacgcca aatggcatat 4741 gaatgactta actattgagt gtaagctatg caataaaaag tttattaacg catccgaact 4801 gaaaacacat atggtttccc ataaccagca gaagagtttc aaatcactgc aacctgatct 4861 caagtccaca aatatgtcaa caactgacgt cgctaataag agatttaaaa cgacaccagt 4921 aaaaaacacc aattcaataa cgctcagagg atttcataaa tgttcagaat gtggaatagc 4981 atttaggatg agtaaaagtc tccacaatca tatgcaactt cataggaaaa tgtgaagacg 5041 tagaattttt aattatcaag atattgttag atataattgt aaattaataa acaatgttaa 5101 tataaatctg aaattatatt ttaaaagata