Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans torsin-like protein (LOC106083062),


LOCUS       XM_013245889            1359 bp    mRNA    linear   INV 02-SEP-2023
            mRNA.
ACCESSION   XM_013245889
VERSION     XM_013245889.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013245889.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1359
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1359
                     /gene="LOC106083062"
                     /note="torsin-like protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins"
                     /db_xref="GeneID:106083062"
     CDS             188..1225
                     /gene="LOC106083062"
                     /codon_start=1
                     /product="torsin-like protein"
                     /protein_id="XP_013101343.2"
                     /db_xref="GeneID:106083062"
                     /translation="MSNDWCIKLVVTLALCCLRPTGILALFDPLSMGLAAGAALGLYK
                     YETLKDQTYCRFRECCNDRYIPADISQLEKDLNNNLFGQHIVIQQLIPALKAHFSEAR
                     NSKKPLVISFHGTPGTGKNFVSEKIAKRIYAEGIRSNYVHRYIGRSAFPYESEAKHYS
                     ERLLKEVRSAISACPRSLFIFDEVDKMPPLVFDSLTSLINFNTVIDGVDGTKAIFIFL
                     SNTAGVHISDRLGQLIKGGTLREDTKLSHFEQTLEKGAYNLDGGLKKTSLIESHLIDH
                     FIPFLPLEKSHVYKCAQAEFNAWGKNPKEEVIERVINDFITYDRTHSIFATSGCKKLV
                     NKVAVEANAHL"
     polyA_site      1359
                     /gene="LOC106083062"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agactttagc ttgcataaat ttgcctagat tgctaccaga atacacctaa tgtaccttga
       61 ctgctaccta ctagtcgtcg ttgccgcgct gtttacactt ttagccgtgg tttcactacg
      121 tgtcgaataa agaattgaat taggggaatt tgactttgag cagattcctg agaatagcca
      181 ctttacaatg agcaatgatt ggtgtataaa attagttgta accctcgcac tatgttgtct
      241 aagaccaaca ggtatccttg cacttttcga ccctttatca atgggtttgg cagcgggagc
      301 agcactgggt ttgtacaagt atgaaaccct gaaagatcaa acctactgtc gttttcgaga
      361 gtgttgcaac gatcgatata ttcctgcaga cattagccaa ttagaaaaag atttaaacaa
      421 taatttattc ggtcagcata ttgtgattca acaattaata cctgctttaa aagcacactt
      481 ttctgaagca cgcaactcaa agaaaccttt ggtaattagt ttccatggaa cacctgggac
      541 tggaaaaaac tttgtgtccg agaaaatagc taagcgtatt tatgcggagg gaatcaggag
      601 taactatgtt cataggtaca taggtagaag tgccttccct tacgagtcgg aggctaaaca
      661 ctatagtgaa cgcttgctca aagaagtgcg ctcagcgatt tctgcatgcc caagatcgct
      721 ctttatattt gatgaagttg ataaaatgcc tccacttgtc tttgattccc ttacctcgct
      781 gataaacttt aacacagtta ttgatggtgt tgatggtaca aaggcaatat ttatattttt
      841 atccaacact gctggtgtgc atatttccga tcgactgggg cagcttatca aaggtggaac
      901 gttacgtgaa gatacgaaat taagtcattt tgagcaaact ttggaaaaag gagcctacaa
      961 cttggatgga ggtcttaaga aaactagcct tatagaatcc catctaatag accattttat
     1021 tccatttttg ccactcgaga agtcgcatgt ttacaaatgc gctcaagcag agtttaacgc
     1081 ctggggaaag aatcccaaag aagaagtcat agaacgagtt ataaacgact tcatcaccta
     1141 tgatagaact cacagtattt ttgccacatc cgggtgtaaa aagcttgtca acaaagtcgc
     1201 cgtggaggcc aacgcacatt tataactcta attatatttg tacttgtttt ttttttaagc
     1261 atattatgtg aattttattg cttttctatt tataatgttt catttttata acgttgttaa
     1321 caagtcgaga tattaataaa cctcttaatt tttctacca