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LOCUS XM_013245689 10229 bp mRNA linear INV 02-SEP-2023 (LOC106082920), transcript variant X2, mRNA. ACCESSION XM_013245689 VERSION XM_013245689.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq; includes ab initio. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013245689.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..10229 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..10229 /gene="LOC106082920" /note="uncharacterized LOC106082920; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106082920" CDS 1..4359 /gene="LOC106082920" /codon_start=1 /product="uncharacterized protein LOC106082920 isoform X2" /protein_id="XP_013101143.2" /db_xref="GeneID:106082920" /translation="MFCRRCWLDFKPKERYIQCSGPCAWFYHHQCVQIPGEVAREMQS NTELEWYCWQCRQLYRLQLYFEIAICDDYSLPVDFVKKRPSSFDPCLAEALPTNPENW VAASPQQEFLTFAELQQQQQQQQQSDPQVPPPPAPLSTLPSRVNAQLLAAAAASNSNE APTAHSTLPTQTGVGHHQNTQPSQTLQQHHHHQHHQQQHQHQHQHQKKSHTQRSQTQQ RLPHPSAAAVIASTATTSTLQVVAGGGSGAVAGAGAGSSATAPLPPPLPAGLTSVQQS QNSAIKQASVKLIEGYSDPKDTKRRHKKVYHKKAKRKAQAKRTASAQQNQTPGLQQQS TTKQPTGNGQTLTTPPQTKEKDKRSNYSSDSSAPKSSDDEDDNQSVKVPDLNSPDSIS DDLVKPLPSQSHRSPRKLTASQSEYGSKRNPSPYYYSDLLKPKDPTTTASAQALNEKE LKQKSRQSTVSEPPQSSSQLFSQPSQPYRKSTSLDVPERSEQEREEQEDEFDVTEATT SNTVLPAGEDATKRYSFTEDGVHIIRCDSPSTTTSEESDCSECLKRREWHARALALVR KTCNVQPLIPAAADYGNICQEPSEDLNCGNFAEQSTPPSMPPHRLLGPAAVCACVAPS IGDDIDEYFRPRSIFYVHPHGVHECVDCAPDSKNLNHNSSRSILDSSSLAQSDNALDE VSTVGDLEDDMSGRTRQIYETAFDCKIAKSDDDLDEVDRINNHAVLLQLNNGNGPPPK TESRNSKSKSRLDGKRLKNSKNQAIQEQATNSGGNNSGSGSPLTVGAGSNRSTEPLAT SVGGLSSELNNVHIREAEVDQQNNPTTSSSQLPMRGYTPSPPSTAPLPMKFPGKHERF FMNSIRSAPNLPSSNPAHPRLRDLRLPLQSNLGRQQQQQTTSSLATSNENSLTDSAYV NPPSSIVHHQHNNSHHHHHLSLHQGANNVSGSSRSRSRPRSFVLESGRVLELRKSHAS HHHHHVGNGSRRPHNYSSTESIATSSSGGSMESLRSSTSEGNRSTSSSESRHSTSLSS HSSESGSSSVAFPLRAPVVIHSKLHILSPISDKSSQEPASELSEQNKTQNASPEDGGP ASGHANSQHHQQQQLQQQQQQHQERENMRPTPQLQIDALKKRRPPANKTLMQLTDEIL GSDSGISLHSREDGKPLMSLQKFTLPTLNFPPNDKGNNHSDISAVGAMSNSVGLPQDL RDLPFDMPKLRRRKTLQQDACTSGSATSVDLGDLPFDMPKLRRRLRANQAEINNLMMH STESSGISQASSSHSMRDDNNKTAMKLDSAIFRQNLTLNLNEPRQANNKFGSLDLRGL SNNKELNLNLNQGFTNAVDLIDVSIPLERQGWYHGAITRIEAETTLRPLAEGSFLVRN CESTKQDYSLSLKGAKGFMHMRIQRNECGQYILGQFSRPFETVPDMIRHFCLNRLPVR GAEHMCLIEPVIAQLL" polyA_site 10229 /gene="LOC106082920" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atgttttgcc gtcgctgttg gttggatttc aaacccaagg agcgatatat acagtgctcg 61 ggtccttgtg cctggttcta tcaccatcaa tgtgtccaaa tacccggcga ggtggccaga 121 gaaatgcaaa gcaataccga gctggagtgg tattgttggc agtgtcgtca attgtatcgt 181 ttgcagttat attttgagat tgctatctgt gatgattata gtctgcctgt ggactttgtt 241 aaaaagcgac cgtccagttt tgatccctgt ttagctgagg cattgccaac caatcccgag 301 aattgggtag ccgccagtcc ccaacaggaa tttctaacat tcgccgaact tcaacaacaa 361 caacagcagc aacaacaatc cgatccccag gtaccaccac ctccggctcc cttatcgact 421 ttaccctcca gagtcaatgc ccaactgttg gccgctgctg ctgcctcgaa ctcgaacgaa 481 gcaccaacag cccacagcac tttgcccaca caaactgggg taggccatca ccagaataca 541 cagccctcac agactctaca acagcatcac catcaccagc atcatcagca acagcatcag 601 catcagcatc agcatcagaa aaaatcacat actcaacgca gccagacaca gcaacgttta 661 ccacatccgt cagcagctgc cgtaatagct tcgacagcca ccacatccac actacaagtg 721 gttgctggcg gtggaagtgg agcagttgca ggtgcaggag ctggttcatc ggcaaccgca 781 cccttgccac cacccctgcc cgcaggccta acctcggtgc agcaaagtca gaattcggcc 841 attaagcagg catcagtcaa actcatcgaa ggttattcgg atcccaaaga tacgaaacga 901 cgccacaaaa aagtctatca caagaaggcc aagaggaaag cccaggccaa gagaacagca 961 tcggcgcaac aaaatcaaac ccctggattg cagcagcaat ccacaactaa gcaaccaacc 1021 ggtaatgggc agacattaac aactcctcct caaaccaagg aaaaggataa acgcagcaat 1081 tacagttcag attcctcggc tcccaagtcc tcggatgacg aagacgataa tcaatctgtc 1141 aaagttcctg atttaaattc tcccgatagc atttctgatg atttggttaa gcccttgccc 1201 tctcaatcgc atcgcagtcc tcgcaaattg accgcttccc aatcggaata cggcagcaag 1261 cgtaaccctt caccctatta ctactcggat cttctcaaac ccaaagatcc caccacaaca 1321 gcctcggctc aggctctcaa cgagaaggag ctcaaacaga aaagtcgcca atccaccgtc 1381 tcggagccac cccaatcatc ttcccaacta ttctcccaac ctagccaacc ctatcgcaaa 1441 agcaccagcc tagacgtacc cgagcgttcg gagcaggagc gcgaagagca agaggacgaa 1501 tttgatgtca ccgaggctac caccagcaac acggtattgc ctgccggtga ggacgccacc 1561 aaacgctact ccttcaccga ggacggtgtt cacatcatac gctgcgactc cccctccacc 1621 actacctcgg aggagtcgga ttgcagcgag tgtttgaagc gtcgcgagtg gcatgctcga 1681 gccttagcct tggtgcgcaa aacttgcaac gtccaaccct tgataccagc agctgccgat 1741 tacggcaaca tttgtcaaga gccctcggag gatttgaatt gtggcaattt cgctgagcaa 1801 tctacaccac cgtcaatgcc accgcatcga ctgctgggtc ctgctgcagt ttgtgcctgt 1861 gtagccccct ccattggtga tgatatagac gagtacttta ggccacgcag cattttctat 1921 gtccatcccc atggcgttca tgagtgcgtt gactgtgccc cagactcaaa gaacctaaac 1981 cacaacagct cacgcagcat tttggatagc agtagtctgg cccagtcgga caacgctttg 2041 gacgaggtat ccactgttgg cgatctagag gacgacatgt cgggccgtac gcgccagatt 2101 tacgagaccg ccttcgattg caagatagcc aagtccgatg atgacttgga tgaggtggat 2161 cgcatcaaca atcatgcagt gctgctgcaa ctcaacaatg gcaatggacc tccccccaaa 2221 acggagagcc gcaactccaa gtccaagagc cgtttggatg gcaaacgttt gaagaactcc 2281 aagaatcagg ccatacaaga acaggccacc aattcgggcg gcaacaatag cggcagtggt 2341 tcgccgctaa cggtgggtgc gggcagcaat cgcagcaccg aacccttggc caccagtgtg 2401 gggggcctct cctcggaatt gaacaatgtc cacatcagag aagcggaggt ggatcaacag 2461 aacaatccca caacgtccag ctcacagttg cccatgcgcg gctacacacc atcgcctcca 2521 tccacagcgc cactgcccat gaagtttccc ggcaagcatg agcgtttttt tatgaacagc 2581 atacgaagtg cacccaacct gccatcatcg aatccggccc atccacgttt gcgcgatctc 2641 cgtcttccac tgcaatccaa tttggggcgc cagcagcagc aacaaacgac ctcctcgctg 2701 gccacaagca atgagaacag tcttaccgat agtgcttatg taaatccacc atcttccata 2761 gtacaccacc aacacaataa cagtcatcac caccatcacc tttcattaca tcagggcgcg 2821 aacaatgtaa gcggcagctc taggtcccgc agccggcccc ggtcgtttgt gctggagtcg 2881 gggcgggtgc tggagctgcg gaagagccac gcctcccacc accaccacca tgttggcaat 2941 ggcagtcgca ggccgcataa ctactcctcg accgaaagca tagcaacatc gagtagtggt 3001 ggcagcatgg aatcgctacg ctcgagcacc agcgaaggca atcgtagcac atccagttca 3061 gagtcaaggc actcgacctc gttgagttca catagctctg aatctggcag ctcgagtgtg 3121 gcctttcccc taagagcacc cgtggtcata cattccaaat tgcatatcct cagtcccata 3181 tcagacaaat cgtcccaaga accggcctct gaattgtctg agcagaacaa aacccaaaac 3241 gcctcacccg aagatggtgg accagcgtcg ggccatgcca acagccaaca ccatcagcaa 3301 cagcaactgc agcagcaaca gcaacaacac caggaacgag agaatatgcg acccacacct 3361 cagctacaaa tcgatgcttt gaagaaacga agaccaccgg ccaataaaac cctaatgcag 3421 ttgacagatg aaattctggg ttcggacagt ggcatttcgc tgcattcgcg cgaggatggc 3481 aagccattga tgagcttgca gaagttcaca ttgcccacat tgaattttcc gcccaatgac 3541 aagggcaaca atcatagtga tatcagtgcg gtgggagcca tgagcaatag tgtgggtctg 3601 ccgcaagatt taagagatct tccgttcgat atgccaaagc tgagaaggag aaaaactttg 3661 cagcaggatg cttgtacttc gggtagtgct acttcggtgg atctgggaga tttacccttc 3721 gatatgccga aattgcgcag acgcttaagg gcaaatcagg ctgagatcaa taatcttatg 3781 atgcatagca ccgagtccag tggtatctca caggcctcat cgagtcactc tatgagggat 3841 gacaataata aaaccgctat gaaacttgat tctgccattt tccgacaaaa tcttacttta 3901 aatctcaatg aaccacgaca ggcgaacaat aagtttggta gtttggattt acgtggctta 3961 tccaacaata aagagctgaa tttgaatctg aatcaaggat ttaccaatgc tgttgaccta 4021 attgatgtct cgataccttt agagagacag ggttggtatc atggagcaat tacccgtata 4081 gaagcggaaa ctaccttaag gcccttggcg gagggtagtt ttctggtgcg caattgtgaa 4141 tcaactaaac aggattattc actatcactg aagggagcca aaggctttat gcacatgcgc 4201 atacaacgca acgaatgtgg ccaatacatt ttaggacaat tcagtcgtcc atttgaaacg 4261 gtgcccgata tgataaggca tttttgtctc aatcgcctac ccgtccgtgg agccgagcat 4321 atgtgcttaa tcgagcccgt tattgcccaa ttactttaaa aaagtactcg cgatcgtcct 4381 cctcctcctc ttacttttcc gtacaccacc aacccacgat acaacacaac acaacaaaaa 4441 gtcatccatt tactaattac atacaaaaac aaattaaacg tcataacaac aacaacaact 4501 tacgcataat ccaaaaaatt aaaatgaaaa aaaaaaaaaa caaaacgaaa gttaaatctt 4561 ccaagaatag tgttattgtg agaagacaaa aaaataacaa caaaccatac catatatact 4621 acaaaaagca cccatactta atgttagaaa cacttaagaa tgacttaacc aaaccaattt 4681 tatttatttt cacagactct tatttcttaa gttaacactc acagacgaca atattaccta 4741 tttataattt tgaaacgttt ttttttgttg tatttttgga gaaagacttt ttccaaactc 4801 acttactatt ctcattggac tacaacaaaa agatacttga acaaaatatc atgcaatcac 4861 tactacgtta gatatgaagt aataattcta caagatcctt aaattttaag tttaaagatg 4921 atatatttga tggaagggag aaaaggttag cgaatatgat taggttataa tctaggcttt 4981 tttactatgc taggtagtca ttgtcaatgc attggttcaa aaattacctg aattaaattt 5041 ttgtttttac ttattgcctt gatatggtaa tttgaagttt aattagtgct gacgtaacgt 5101 aataatgggg cactttgaaa agtaacgagt acttggagtg cttgaacttc taaaataagc 5161 acccactatg ctggtatatt tcgtacgtga tcctgggtta ccttggttaa gttacgttat 5221 ttccactaat tagcttagta aacttttaaa tgtgtttgta ttaaatacat atgaaattct 5281 gtttatatga aagataaagc tacgatctat aaaactatca gctaatcaca cagacggata 5341 aaactgttac tcgtacaata agttgaactt acgttacgtt agttccacta attaacttaa 5401 gaaattcctt gatttgagaa aatgttgtgt tcaattcatg ttaatttggg tgtgtgagca 5461 ataaaactat cagctaacca ctcggacgga taaaactgtt actcattagt tgaacttacg 5521 ttacgttagt tccactaatt agcttaacaa tcttagatct gagtaaatgt tgtgttcaat 5581 tcatgtaaat ttgggcatat gaacaataaa actgtcagat aatcaagcgg acgaatataa 5641 ttcggaatgg tattgatgaa ttgaacttat aattttttat cccttgttcc ttaagggaat 5701 gttcatggaa aatgtagtat ttttatgaat gtttaaatca atggttcgat tctgtaattt 5761 gttgcaattt gttaccataa tttggcaaaa cagatttttt ttgcgatgat ttttgagcac 5821 tatgctgaaa ataatataat ttggaaaccg gaacacaaac aacttttcta aaggccgaag 5881 tgggtttccc aaagccccca aggccaccta gggccttgta attttgcacg tcatctcgtt 5941 aacacctcag cactaactct ttaaatttcg aagagttcaa tttacctgtt cccaaaacgg 6001 tagagtttta actatttttc tgtttctgtg agtttctgtc tatctcactc tagaccaaaa 6061 tataaacaaa aaacaaaaaa acctccaatg tttctgtccg ggctgcttca aagaactgga 6121 tgtgcgttag cgtcaccttc aagtgcttgg tcatactgct tgttttcgca tcagctaccc 6181 aagggccaga ccagcagggg attttcctta tcatacggaa gatacaagga ggctatgacc 6241 agtattgggt ttattaatgt aaaagttata tgtgatctcc agaaagtgag agaggttaac 6301 catgtgcaac tttgtcacac tgaatcccac cctgtactag agatacatgc caacattaac 6361 tttgagagaa gttcaccatg tgcaactttg tactattgaa tcccaccctg tactagagag 6421 acaggccaac aataaatttt tccaacttac aaatgcctgc tgctgaactg ctcaaatcat 6481 tacaacgttt gttgttaatt atttccattt tctttccttt tggcccactg tgtcacacaa 6541 atatggccaa acttagtact tgcctatgat ggctttcact atgaaaattc aattagtggt 6601 cacgtaacgt ctaaagggtt acatttaaaa gatactgagt tttttaagta tttaaagttt 6661 caaataagca ggaaccttgc tggtatatta gatttatgag cctagattac taatttacat 6721 tacgttattt ccactaatta tcgtaataaa gacttagatt tgtataaatt ttaagtttaa 6781 ttcgcctaaa ttttggttta aatgaggaat aaaccaatta gctttaaaac tatcagcttc 6841 ttagacggac ggtcaaaaat tacaactgta aatatatttt acgttacgtt agatccacta 6901 tttagcttaa catattgctc aggttcatat tagaaagact aagagacatt acaacgactg 6961 ttgtgaattg tttccatttt tttttgcgtt ttggcccact gtgcgaaaca aatatgacaa 7021 aactttctac ttgcctatga taccctacat gactttcatt atgcaaaatt caattagtgg 7081 taacgtaacg tttaaatgag tcattttgaa aagtattgag tttttgaagt atttatggta 7141 cttttggccc actgtgcgaa acaaatatga caaaactttc tacttgccta tgatacccta 7201 catgactttc actatgcgaa attcaattag tggtaacgtt acgtcataat ggggtcattt 7261 tgaaaagcat tgagtttttg aagtatttaa ggtttcaata taagcaggca tcttgctggt 7321 atattagatt tatgagccta gattaccaat ttgcattacg ttagttccac taattatcgt 7381 aataaagact tagatttgta taaattttaa gtttaattca cctaaatttc gatttaaatg 7441 aaaaataaac caacgagctt tacaactatc agcttgtcag aaggagggat agtaagttat 7501 aactgtcaat atattttacg ttacgttaga tccactattt agcgtaacat attgctcagg 7561 tttttattag aaagactaag agacattaca acgactgttg tgaattgttt ccattttttt 7621 gcgttttggc ccactgtgcg aaacaaatat tacaaaactt tctacttgcc tatgataccc 7681 tacatgactt tcattatgca aaattcaatt agtgaaaacg taacgtctaa atgagtcatt 7741 ttgaaaagta ttgagttttt gaagtattta tggtactttt ggcccactgt gcgaaacaaa 7801 tatggcaaaa ctttctactt gcctatgata ccctacatga ctttcactgt gcgaaattca 7861 attagtggta acgtaacgtt taaatgggtc actttgaaaa gtattaagtt tttttaagta 7921 tttaaagttt caaaataagc agctaccttg ctagtatatc agatttgtaa tcctagatta 7981 ccaatttaca ttacgttagt tctactaaat agcctaataa gtgcttagat ttgtgtaaag 8041 tttaagttta attcacataa atttcggttt aaatgaaaat taaaccaacg agttttaaaa 8101 ctatcagcta tttagacagt cagatacaag ttgtagctgt aaaaatattt cacgttacgt 8161 tagatccact atttagctta acatattgtt caggttcaca ttagaaagac taaaagacat 8221 tccatttttt ttgctttttg cccactgtgc gtctcaaata tggcaaaatt ttctatttgc 8281 ctatgatacc ctacctgact ttcactatga aaatccgatt agtagtgacg taacgtctaa 8341 atgggtcact ttatcgagtt tttgaagtat ttaaggtttt aacataagca ggtatcttgc 8401 tggtatatta gatttacaat atatgcctgg attaccaatt tcaattacgt tagttccact 8461 aattaacgta ataatgtctt agatttatgc aaagtttgtg tttaatttac atacatttgg 8521 gtttatttga gaggtaaagc aaggaactat aaaactctca gccagctatt cagacggacg 8581 gttaaaagtt atacgttacg ttagttccac tattcaataa attttccatg aacatttcac 8641 taatcaatag gggatgcatt tctcatatca atgagtgcag ttcgattaca gtttaagctc 8701 aatgataagg ggcctccttt tttatgccga gtccgaacga cgagccgcat agcaacacca 8761 ctaggtagag aagttttaac atggcaggat tattcacatt agtaagggga tagccaccgc 8821 ttacaatttt tctgatgttc acagcggaat ttgaacccag gcgttgggcg tcataggcgg 8881 atatgctaac ttctactcca agatggcctt tagctttaca tattcctcaa tttatgtttg 8941 gtcttaattc atgaaaattt cggtttatat gaaagtaagc tatgagctat gaagtggacg 9001 acgaataata ttcataataa cactgaagaa ttgaacatac cattctttgt aacacgtctg 9061 tcttgtgatt gtttaagaaa ctgccaatat acaataagcg tcaaaagtgg gccaacatcc 9121 atgcaaagtt ttgccttttg taagacatgg aaatgtttaa aatattacaa atttgcaaga 9181 atgttgaaga tacagatttt gctacgttac attcttatcg caatcttaca acaaactaca 9241 tttaaacggg tgttgactca cttttgatgc tcatagtatt tctgttcctt aatggaatgt 9301 ttatagacaa aatataaagt atttcccggc tcataaatac aatcttttca ttctaccaat 9361 atcctcctaa tagttggctc attctgttct ctatttggct gtttcacttt gctattttct 9421 gccaatggaa tcataccaaa aactttcaga aatcttcatt tcctttcctt ttcccaacta 9481 tttatcaaaa tatcatcttt aataattttt ttagcgtagc ttagtatctc attaatgtag 9541 cgtaaagtga agtaacgcaa tgcaacgtaa cgtagcataa ctcaaggtta cgtaccacaa 9601 acgtttatcg tttatagtaa aacaaaaaaa aaaaggaaaa aaccacggaa ctttgttgat 9661 taattttatg taacggctta aaactactat tgaagcagaa aatttataac aaaaaaaaag 9721 aatacaaaaa gactctcaaa gagcataact atctctataa ctttaggttt gcatatgagc 9781 gatcatattt aacttaagct atgtaggagt aaaatatgtg tatcattaaa ccgtcttagc 9841 ttaacagtta tttaaaaact aattttcttt atttagtata ctatataatt tcaagtgcaa 9901 tatcattttt aagttagcag ttcagttaaa acgcaacgta acgcatcgta aggttatgtt 9961 gaaaatcgtt tttctagttt aagtttcgaa aaaatcctaa aaaagaaaac atttttagtc 10021 agagcgtgtg ccaaacaata aatttcgttg agactttttt ggttagccaa aaactttaat 10081 tttttaaagt gcaataacta gacttgtagt atttttcctt ctccccccct ccctccagtt 10141 tgagtattaa aattggtttt tgttttttta aagaaaattt tattcacatt tttctgtttt 10201 tagtcttttt ttacaaaatt ttttgcttt