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PREDICTED: Stomoxys calcitrans sex determination protein fruitless


LOCUS       XM_013245680            3111 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106082923), transcript variant X2, mRNA.
ACCESSION   XM_013245680
VERSION     XM_013245680.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013245680.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3111
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..3111
                     /gene="LOC106082923"
                     /note="sex determination protein fruitless; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 Proteins"
                     /db_xref="GeneID:106082923"
     CDS             416..1858
                     /gene="LOC106082923"
                     /codon_start=1
                     /product="sex determination protein fruitless"
                     /protein_id="XP_013101134.2"
                     /db_xref="GeneID:106082923"
                     /translation="MTRTSKMSPSHRQEFCVRWNSHLGSIGAAFPQLLAGQRFVDVTL
                     ACEGHQVHCHRLVLAACSSYFESILAENPCKHPVIILPSEIKLWEIQALVDFMYKGEV
                     NVTQAGLPQLLRCAEQLRIRGLYGSDAALNLNQLKALTGKAPQQSNNIRSSSAQSTGL
                     PADSNDEDTATNSTTTTATSTIQTNPQNVVIKKEPATGNPNQGQPMLTPVSLNTLMAN
                     PAAIAANFAAQRHDSSDEPTSSNAYEQYENCQNANNALNAAASQQHNTMQQQSVANST
                     PTSTPIPQNISTQHMDSTIEDDHNYVAHDEDDSFAGVMADSEHDSTANNSMMQVSMDH
                     NSSLKRIRRSEESLEQAAKCVSKGQTFQTVSNMYNIPVSTIRFYMARKGILPKRKRGR
                     GASSSAAGAGNGSGAMMALGGSNNVLGGNGMGGGVIAPNPAALAMSHMSQALAQMKQQ
                     RVDSPNSAQYSEEAAYHLLSYKMKEAPRLV"
ORIGIN      
        1 ttttttttat aaatttatat taagtacagt gttcaaaatt gttggtcgtt taagctattt
       61 tcttggtgca gtgttattgg cctctgttgc tcggctttgt gtcttcctgg cgtcatttgt
      121 ttaaaattta agacggagta aaatttgata tttttcaagg catacatatt gggctactat
      181 aagtaactaa attaatttcc aaagggtgac gacgataaaa caacgacatc cgcaaatcac
      241 cgaatcttcc gccatacaat agacaaccct taactagggt taacttcctt ttctagtctt
      301 caagagagta ataaagaagc gccaattttt atactactac agcctaaact aattcaaaca
      361 tacgcttccc atacaaatat aagcacgaaa agaaacagaa cattattgac aacatatgac
      421 gagaacaagc aaaatgtcac cctcacatcg acaggagttt tgtgtgcgtt ggaacagcca
      481 cttgggtagc attggagcgg cattccctca acttttggcc ggtcagagat ttgttgatgt
      541 cactttggct tgtgaaggcc atcaggtgca ctgtcatcgc ctggtcttgg ctgcctgctc
      601 atcgtatttc gaaagcattt tggccgaaaa tccttgcaaa catcccgtta ttattttacc
      661 ctcggaaata aaattgtggg aaattcaagc cttggtggat tttatgtaca aaggggaggt
      721 caatgtaaca caggctggcc tgccgcaatt gctgcgttgt gccgaacaac tgcgtattcg
      781 agggctttat ggttcagatg ctgccctaaa tctcaatcaa ttgaaagctt taacgggtaa
      841 agcgcctcaa caatccaata acatacgatc gagttcggct caatcaacag gtctaccggc
      901 cgatagcaat gatgaggata cagcaaccaa ctcaacaact accacggcca caagtacaat
      961 acaaacaaac ccgcaaaatg tggtaataaa aaaggaaccc gcaacgggta accccaacca
     1021 ggggcagccc atgttaacgc cagtttcctt aaatacacta atggccaatc ccgcagcgat
     1081 agcggctaac tttgcagctc aacgccacga ctccagcgat gagccaacat catcaaatgc
     1141 ctacgaacag tatgagaatt gtcaaaacgc caataatgct ctaaatgctg cagcttccca
     1201 acaacacaat actatgcagc aacaaagtgt tgcaaattca acaccaacgt caacgccaat
     1261 cccgcaaaac atatcaacac aacatatgga ttctaccata gaggatgatc ataattatgt
     1321 ggcacatgat gaggatgata gttttgctgg tgttatggct gattcggaac acgactcgac
     1381 agccaacaat tctatgatgc aagtatccat ggatcataat agttccttaa aacgcatacg
     1441 cagatctgag gaatcattgg agcaggcggc gaagtgtgtg tccaagggtc aaacttttca
     1501 aacagttagt aacatgtaca acatacccgt gtcaacgata cgtttctata tggcccgcaa
     1561 aggcattttg cccaaacgca aacggggccg tggtgcatct tcgagtgcag caggggcagg
     1621 caatggttcc ggagccatga tggctctcgg tggtagcaat aatgtattag gaggtaatgg
     1681 tatgggaggt ggtgtcattg cccccaatcc tgcagctttg gccatgtcac atatgtctca
     1741 agctttggct caaatgaaac agcaacgagt ggatagtccc aattctgcac agtattccga
     1801 agaggcggcc tatcatttgc tcagttacaa aatgaaagaa gcgccgcgtt tggtatgaaa
     1861 ccaacgagct gactaaagtt gttctaagct aaacaaggac tagaaataga acgacaattg
     1921 ccgaaatcat tttagagcta agaagaaaat gttgtgagtt tctaaaacta agatatacat
     1981 acatactaat tgcacactaa cacgccacat atgcatgtaa aaataccaag aataattttc
     2041 ataatattca aggctaaagg aaaacatttg attagaacga tgaagatgat gctttaactg
     2101 tatagaacta aacatttctt acttctgctc gatagatgta atgataaagg cgcatcgtat
     2161 agccattagg tgaggctata tttatttcat ggtttggcct ttttgttttc aaaaaaaaaa
     2221 atggtagcta cattagtatt tattcgaaat tcaatcgatt tttaattgcc atagtttgct
     2281 atacttttta aaatatcttc aaagaaaaat ttgtaaacat ttctcatatg ttatataatg
     2341 tttcgtttgg cctttaagat ctattcagtc gtatatactt ttctatctgt attctttact
     2401 cttattcccc aaagaaagtt ggtccaagaa gctagttggc aaggaaaatg ttgtaagaca
     2461 gaggggaatg gttttcatac cctcttattg aggaggtata agcaaagaga ctttgtagca
     2521 aaaacgagag aagtaaattt ttccaagcat ttaagtcttg tctgcttctc ctataatttc
     2581 taacaaggaa tttcgagaca actttctaat atcataaaaa gaagaataca tgcttagaag
     2641 aagacctgct taaaaaactg ccatgccttt gcatgcgttt ctgagttgac ttggccgttc
     2701 aaagattcaa acagatgtca accattttat caccaccaat gagcggggtt gccaccccat
     2761 atataaataa tttactgtaa gcgctttgac cttgtttact tcttttttat tttttaaaac
     2821 atagtttcga gatattttcc ttcacttcat tttaaagtct tcgacttttt acttgaacaa
     2881 ctgtcaaaac gtattgtaaa aaaaattgtg acaatgaaaa tgcgaacaag tttcattgaa
     2941 gtggcacgaa atggacacca atcatctctg cttcaatgtt ttgtttgcgt tccgaccagg
     3001 aataaagtcc gtcggatttc gcattaataa taggcatttt cgctgcaaat aaatccatta
     3061 ttagacttta gatggaagta tcgatcttca tttcatattt cagttaaaca g