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PREDICTED: Stomoxys calcitrans coiled-coil domain-containing


LOCUS       XM_013245645            2832 bp    mRNA    linear   INV 02-SEP-2023
            protein CG32809 (LOC106082865), transcript variant X6, mRNA.
ACCESSION   XM_013245645
VERSION     XM_013245645.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013245645.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2832
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..2832
                     /gene="LOC106082865"
                     /note="coiled-coil domain-containing protein CG32809;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:106082865"
     CDS             244..2700
                     /gene="LOC106082865"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein CG32809
                     isoform X6"
                     /protein_id="XP_013101099.1"
                     /db_xref="GeneID:106082865"
                     /translation="MLIRWKSKDKSSPNPANASSGGGSGGGGGSSGSSSSSSKKKRKG
                     REGDENWQNDMKSGHMQNTEQDRRRNMRREDPRRHTLGGDMLSYVNQQNQQQTLKAMD
                     LEMSSRMQKSKKMQPSRGYTPINQGPLFDDDPGIMSEVETASTGFRRGGKQRSSLPVV
                     RTPSKTLERPLGLVFLQYRSETKRALLPNEITSIDTVRALFVRSFPRQLTMAYLEGPN
                     VKIYIHDASKDMFYELEDVRSHLREIRDRSVLRLFESTEVAAPPQILPGGPGIPQPLP
                     QPNPTHWDQDQSYFSEPEFDSDYKNQHIHKSKIGKQAPYYVGASQTLPRGMYTDRNKV
                     AMDGYTSSPERSTRGNYEEPSYYQYGTRGPVIAPIIDEEQTEVTMTEDQYALYGIKMG
                     PGRMPRNNQMYDPTRPEDLHRFRVEHMERQLANLTGLVQKALVNQNPQIAPIPVPTLD
                     PNYLVVPTQCHVNGSGDDQYVREKAPKLGKNACGKSVSFEKSVSFSDDIQGIPKSHSP
                     QHAADTKPTKPAIKSSTLPRTSSQERDRLKPPPPPKPMVLAQTAHNNYRADIALAPEV
                     YNHLRGLQKKAKDLRTEVRTLRRLSQAQAVAVREDIKSTFMRIRATLLASSGSIWGHQ
                     DQDATRISREEELYKQEVIRLEKDLSDLESSVESLRGEVINRRTRVNMTAVEDMALVL
                     SRASKTVAELKMKFPALSNGLRCILSSEMEKVVREEKFLKEEPDRLESALRRCKKLTG
                     TLVTLKRLASVQEQRLPPTEPQINEDPPRSTDVSVADKFNWRWSSNFKEAITDQSHNP
                     GWGRSLSAGEPHQKTHSMLC"
     misc_feature    766..>999
                     /gene="LOC106082865"
                     /note="Actin interacting protein 3; Region: AIP3;
                     pfam03915"
                     /db_xref="CDD:427585"
     misc_feature    <1936..>2538
                     /gene="LOC106082865"
                     /note="DNA double-strand break repair ATPase Rad50;
                     Region: PRK03918"
                     /db_xref="CDD:235175"
ORIGIN      
        1 tacggtcata gacgacagca tataaaaata taaatgaaaa gaatttctta aattaatgct
       61 ggttgaaaca accaattaaa ttgaaagaaa attaattaaa aaccaattaa aacattgcaa
      121 aagaaattta tctactaagt cgaagtgttt taggccaagt gaagaaaagt gcagaaaacc
      181 atagagaaat tttaaaattt agcaaattgg aacaaaaggc tttggcctgt tctacccgct
      241 gaaatgttaa tacgctggaa aagcaaagat aaaagttcac cgaaccctgc aaatgccagc
      301 agtggtggtg gcagtggagg cgggggtggc agtagtggct ccagcagcag tagttccaaa
      361 aagaaacgca aaggacgcga gggcgatgag aactggcaaa atgacatgaa atccggtcat
      421 atgcaaaaca ccgaacaaga cagaagacgt aatatgcgta gggaggaccc tcgcagacac
      481 acgctaggtg gtgatatgtt atcctatgtc aatcaacaga atcaacaaca gactctgaaa
      541 gccatggatt tggagatgag ctctcgcatg cagaaaagca aaaagatgca accctcacgc
      601 ggctatacac ccatcaatca ggggcccctg ttcgatgatg atcccggcat catgtccgaa
      661 gttgagacag ccagtactgg gtttagacgt ggcggtaagc aacgttcttc gttacccgtt
      721 gtgcgtacac cttcgaaaac cttagaaaga cctctaggtt tggtattctt gcagtatcgt
      781 tctgagacca agagggcctt gttgcccaat gaaatcacct ccatagatac ggtgcgtgcc
      841 ttgtttgtgc gctcgtttcc caggcaattg accatggcct atttggaggg accaaatgtc
      901 aagatttaca tacacgatgc cagtaaggat atgttctatg agttggaaga tgtgcgctca
      961 catttaaggg aaattcgaga tcgttcagtg ctgcgtttat tcgaatcgac agaggtggca
     1021 gcaccgccac aaatattgcc gggagggcca gggataccac agccactgcc tcaaccaaat
     1081 cctacgcatt gggatcaaga tcagagttac ttcagtgaac cagaattcga ttcggattat
     1141 aaaaatcaac acatacataa atccaagatt ggcaaacagg ctccttatta tgttggcgcc
     1201 tcacaaacat tgccccgtgg aatgtatacc gatcgcaaca aagtagccat ggatggttac
     1261 accagttccc cagaacgttc tacacgtggc aattatgaag aaccttcgta ttatcaatat
     1321 ggtacccggg gacccgtgat agcacccatc atagatgagg aacaaacgga agttaccatg
     1381 accgaggatc aatatgcttt gtatggcatt aaaatgggtc caggacgcat gcctcgtaac
     1441 aatcagatgt atgatcctac aagaccggaa gacttgcatc gttttcgtgt agaacacatg
     1501 gaacgtcaat tggctaattt aaccggcttg gtgcagaagg ctttggtaaa tcaaaatcca
     1561 caaatagccc ccataccagt gccaacattg gatcccaact atttggtagt acccacacaa
     1621 tgtcatgtaa acggctctgg tgacgatcaa tatgtgcgtg aaaaagcacc aaagttgggc
     1681 aaaaatgctt gtggcaaatc agtatcattt gaaaaaagcg tttcgtttag tgatgacata
     1741 cagggcattc caaaatcaca cagtcctcaa catgccgctg ataccaagcc cacaaaacca
     1801 gccattaaat cctccacttt gccaagaacc tcctcacaag aacgtgatcg ccttaaaccg
     1861 ccaccacctc ccaaacccat ggtattagcc caaacggctc ataacaacta tagagctgat
     1921 attgctttag cccctgaagt ctacaatcat ttaagaggtc tacagaagaa ggccaaagat
     1981 ttacgtacag aagtgaggac tttacgacgc ctctcccagg cacaggctgt agcagtgcgt
     2041 gaggatataa agagcacttt tatgcgcata agagcaactc tgttggccag tagtggcagt
     2101 atatggggcc atcaggatca ggatgctaca agaatttcac gtgaagaaga gttgtataaa
     2161 caggaagtga tacgtttgga gaaagatcta agtgatttag agtcatcagt agaaagtctg
     2221 agaggagaag tgattaatcg cagaactaga gtgaatatga cagctgtgga agatatggca
     2281 ttggttttaa gcagagctag caaaaccgtg gccgaattaa aaatgaaatt tcccgctttg
     2341 tccaatggtc tgcgctgtat tctttcaagt gaaatggaaa aagtggttag agaagaaaag
     2401 ttcctaaaag aagaacccga tcgtttggag tcggctttga gaagatgcaa aaagctaacg
     2461 ggcactttgg tgacattaaa gagattggcc agcgtccagg aacaacgttt accacccact
     2521 gaaccccaaa tcaacgaaga tcctcctcgt tcaactgatg tttctgtggc cgataagttt
     2581 aactggcgct ggagttcaaa cttcaaagag gcaatcactg accaatccca caacccagga
     2641 tggggacgtt cgctgtcggc gggggagccc caccagaaaa cgcactcgat gctttgttag
     2701 atgaattgaa aacattttca aagcctctaa ttgccaataa tgagaaccga cccgatgatt
     2761 ccacttctga tgacagtacc cccatggtac aaagcactgt taccacacaa atctcccagg
     2821 cccatttgta ta