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LOCUS XM_013245626 6666 bp mRNA linear INV 02-SEP-2023 (LOC106082887), transcript variant X1, mRNA. ACCESSION XM_013245626 VERSION XM_013245626.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013245626.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6666 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6666 /gene="LOC106082887" /note="E3 ubiquitin-protein ligase UBR1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:106082887" CDS 623..6172 /gene="LOC106082887" /codon_start=1 /product="E3 ubiquitin-protein ligase UBR1 isoform X1" /protein_id="XP_013101080.2" /db_xref="GeneID:106082887" /translation="MDSYEDEVVAPTTTSSESPLKDWRVKFLADTLDKNDFIEFFQKE SRQYFEHDTSGADSARSWRDALSEIKNLKNNKRGCEGSLKCMFKEAAAKEGIIDVLME FILGDNPNIVLEKLRLEGATSAVCGKVFKIGEPTYSCRECGMDPTCVLCVNCFKQSAH RYHKYKMSTSGGGGCCDCGDEEAWKKDHYCEEHLRGKENSSSSTIITDAIKERCEIAF VAILTFCVNYLEIETNASLKCLDGDGIGKDYFCTVLYNDESHTFDQVIQTLTKIAKVQ HKEATEIVASIDREGRAVVKCDSFNECAALKEAIEKQSVPPNMAMPNSRANQSLRVNV LHIRAVACQQFALQLLTWFQEFLVRHSTFRQIFARIVMDKKAPYCIRHILEYDVALWK TARTCWHRLLISGMLMEYDNKMALAQEFSKNYATIVQDFISDDHDHSYSIVSLSVQLF TVPSIAHYLIAQEGIFYKLLHTFYHKSIEDYMQNKTLHFSKNVSTLSHFKRAAYILYD LRYILSFKPDFWTQELREGFNEGCKALLRVLNAMQGMESVTRQTGQHMDYEPEWECAF NLHIKLANTISLVLEWAATDKEVLEKLCVMVMRYLMQNTFIIGQAKKEQRTVENHIAE CLIYDVSSKPVSIHLPLSRFFAGIYLHLGQYGLNFDMISSLKRTPEEIMEPILCTQVM MAQVHSGMWRRNGYSLLHQLYFYRNVRCRTEMLDRDIVGMQIGASLIESNEYLIHLLN KFNLIEWIQPDYEDSNVEPTTDDDFIRQLSMIDEFLELLIVIIGERFMPGVAHVTEED RTKKEIMQLLCIKSYSHSELNRALPDSNNDTALEDVIDSVAVFKKPQKTDAKGVYELR EELYDGFNMYFYHYTKEDKSKSEETQRLRRKNKGELVCCPPPKLPKLTDSFVTIANLL QCDVMMHLMKTILERALDLKRKSFQENHLQKILFLIGYGLQEEESNNYPFLSFYQWAH RYKLLPKLEELSRSARVEAHRDFILWTIKKFKDLQAKQTTAEGLERMQSDDLEPTSSA HDDNGSGDIAATTLTSAEQEKREKEERARLAAERRAKILAQMQSAQNKFMTSNAEMFA SANDVASDANAGTAMEWQDENLEGAVAYNSTACLGVERRLQQPEEEKYKCILCFEEAV VSKDGPTLVYSAFVQKSKVLKPESNYAYSVHTSSCGHVMHVNCWQEYYNNEESKEIRR PRRHPLQVFPSSPSTEFQCPYCRCLSNTVLPLTPPLSKYSVPNVFHAGDEMFPIDLWI EGIRVFSDKLNNLILTEDPDLWSFHLPEWLPTLKEAHIPIDPKQFEKMAQPTQRGELP VSWINFVQHYMKSLKRNEDEGLLNMWHTCVYTVQALEVYLRSVGKPLKDEMSIRHQSC LSGLIRACCLYSGNLTQTDVKSLIKPVAELLNVVFKHNGDSVLEWNCFSKMVSTIMMV PNILFARVRGASVVANGSLMDFYTLQVFLLANVVKSIVLFEQTAEGLMDIEEEDYVAL SDKQLENISIFFNKYNIQARQKAKMAAAAAAAQTQQPKKSVSKESSQEEQSTTVAAES AASDDIDAGMTDVTQQQQQQQSTIAEPKPELLSPQLVTALLDHVKMEMREFLRCSCLF FHFVTDVEFPDSLATSESDTFENMCKYLGLNSQLESYFDNATPYATIMEMFASHHDIT NLDVVTTKIKMTDDPLVIMPCNRTVPQLVNLPEDYSDLINSVSDFSCPNNEREEMKTP TMCLMCGEILCAQSYCCQPDLDSRNVGACTYHAYFCGAEIAPFLRIRDCQIVYLGKNK GCFVQPPYLDDYGETDQGLRRGNPLRLCPARYSKIHLTWLAHGLHEEIARLNDHSSAI TTQWHHM" polyA_site 6666 /gene="LOC106082887" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 attttgagct tcaacttata aagaagtgtt gtgtccgtaa tcgcgatttt ttccaataag 61 agaaataact ttttttttgt atatattgcg atagttgttt cgcaatataa atttatacaa 121 aaaaaaaaaa aaaatagaaa ggaaaaatac agaaagagag tgagaaaaat gagtaaattt 181 tagtgcacaa tacattaaaa cacacacatc cccacgcacg aaaaggcaaa gcaaatttat 241 gaaaactgcc taagaagaaa caaataatag aaaattacaa attgaaaaag tgaaaataca 301 aagacacaag aaaaatttga aattagttaa ccacaaaata aagcgaaaac atttcaaatg 361 attagcagcg cacaatttct gtacagagct gttgccattt gctagtgtct caagacatac 421 acatacacaa caacgatata agaagaagaa gaaccaactg gaagcggtcg taaaaaatct 481 cacaactgga tagcttccgg caacattcta tagcagcatc aacaataaca acaaccataa 541 ctctttaaaa cgccatcaag ctccgaaatc catcattttc atcgtctgtc gcacgcatca 601 attgtgatct ctagcctaaa gcatggatag ctatgaggat gaggttgttg caccaacaac 661 cacatcatcg gaatcgcctc tcaaagattg gcgtgtaaaa tttttagctg acaccttgga 721 taaaaatgat ttcatagaat tctttcaaaa agaatccagg cagtattttg aacacgatac 781 cagtggtgcg gattctgccc gaagctggag agatgctcta tccgaaatta agaatcttaa 841 gaataataaa cgtggctgcg aaggttcctt aaaatgcatg ttcaaagagg ctgctgccaa 901 agaaggcatt atcgatgtcc ttatggaatt catattgggc gacaatccca atattgtgtt 961 ggagaaatta cgccttgagg gtgccacctc ggcggtgtgt ggcaaagttt tcaaaattgg 1021 cgaacccacg tacagctgtc gtgagtgcgg catggatccc acctgtgtat tgtgtgtgaa 1081 ttgttttaaa caatcggcac atcgttatca caaatataag atgtccacct ctggtggtgg 1141 tggatgttgc gattgcggtg atgaggaggc ctggaagaag gatcattatt gcgaagaaca 1201 cttgcggggc aaggaaaaca gttcaagcag taccattata acagatgcca ttaaagaacg 1261 ctgtgaaatt gcctttgtgg ccattctaac attttgtgtc aactacttgg aaatcgagac 1321 aaatgctagt cttaaatgcc tcgatgggga tggcattggc aaggattatt tttgcaccgt 1381 cctctacaac gatgaatccc atacatttga tcaggtcata cagactctga cgaaaattgc 1441 taaagttcaa cacaaggaag ctaccgaaat cgtggccagt attgatcgag aaggacgcgc 1501 tgtggttaaa tgtgatagtt tcaacgaatg tgctgccctc aaggaggcaa ttgagaagca 1561 gtcggtgccg cccaatatgg ctatgccaaa tagtagggcc aatcaatcgc ttcgcgtcaa 1621 tgtgttgcat atacgcgctg tggcctgcca gcaatttgcg ttgcagttgc tgacatggtt 1681 ccaagagttt cttgtgcgtc acagtacttt ccgccaaata ttcgcccgca ttgttatgga 1741 caagaaggcg ccctattgca tacgccacat attggaatac gatgtggcct tgtggaagac 1801 cgcccgtact tgttggcacc gtttgttgat ttccggcatg ctcatggagt acgacaacaa 1861 aatggccttg gcccaagagt tctccaaaaa ctatgctacc attgtgcaag acttcataag 1921 cgatgaccat gaccattcgt attcgattgt gtcacttagt gtccaacttt tcacagtgcc 1981 aagtatagcc cattatttga tagctcaaga gggtatcttc tacaagttgt tgcacacctt 2041 ctaccacaag tccattgagg attatatgca aaacaagaca ttgcacttct ccaagaatgt 2101 ctcaacactg agccatttca agcgggccgc ctatatactc tacgatttac gctacatact 2161 tagttttaag cccgactttt ggacccaaga actgcgagaa ggcttcaatg aaggctgtaa 2221 ggctctactg cgtgtcctaa atgccatgca gggcatggaa tcggtgacgc gtcaaacggg 2281 ccagcacatg gactatgagc ccgagtggga gtgtgcattc aatttgcaca taaagttggc 2341 caacaccatt tcgctggtgt tggaatgggc tgccacagac aaggaggtgt tggagaaact 2401 ctgtgtcatg gtaatgcgtt atttgatgca gaataccttt attattggcc aagccaagaa 2461 ggagcagcgc acagtggaaa atcacattgc tgagtgtttg atttatgatg tctcttccaa 2521 gccggtgtcc atacatttac ccttgtcccg tttctttgcg ggcatctatt tgcatttggg 2581 ccaatacggt ttgaactttg atatgattag cagtttgaag cgaacacccg aagagataat 2641 ggagcccatt ttatgcaccc aggttatgat ggcccaggtt cattctggca tgtggcgtcg 2701 taatggctac tccctgctgc atcagttgta tttctaccgc aatgtacgtt gccgcactga 2761 aatgttggat cgtgatattg tgggcatgca aattggcgct tcgttgatcg aaagcaatga 2821 gtatctcatc catttgctta acaaattcaa tctgattgag tggatacagc cagactatga 2881 agattccaat gtggaaccaa ccaccgatga tgatttcata cgacaactct cgatgattga 2941 tgagttcctt gaactattga ttgtcatcat tggtgagcgt tttatgcccg gtgtagccca 3001 tgtcaccgaa gaggatcgca ccaagaagga aattatgcag ttgttgtgca ttaaatcgta 3061 ctcgcattct gaactgaatc gtgctctgcc cgattcgaat aacgacactg ccctagagga 3121 tgttattgat tcggtggctg ttttcaagaa accccaaaag accgatgcca agggtgttta 3181 tgagttgcgg gaggaacttt acgatggctt caacatgtac ttctaccact acaccaagga 3241 ggataaatca aagtcagaag agacacaacg attgcgtcgc aagaacaagg gtgaattggt 3301 gtgttgtcca ccgccgaaat tgccaaagct tacggatagt tttgtgacaa ttgccaattt 3361 gttgcaatgt gatgtcatga tgcaccttat gaaaaccatt ttggaaagag cattagactt 3421 gaagaggaag agtttccaag aaaatcattt gcaaaagatt ctattcctca ttggttatgg 3481 cttgcaagaa gaggaatcca acaactatcc cttcttgtcg ttttatcagt gggcccatag 3541 atacaaactt ttgccaaagc tagaagagtt gtcacgtagt gccagggttg aagctcatcg 3601 cgatttcatt ttatggacaa ttaaaaaatt caaagattta caagccaaac aaacaacagc 3661 cgaaggtctc gaacgcatgc aaagcgatga tcttgaacca acatcgtcgg cgcatgatga 3721 taatggcagc ggtgatattg ctgcaacaac attaacctca gccgagcagg agaaacgtga 3781 gaaagaggag agggcacgtt tagcggctga gcggcgtgcc aagattctgg cacaaatgca 3841 atcagctcaa aataagttca tgacctccaa tgcggaaatg tttgccagtg ccaatgatgt 3901 ggccagtgat gccaatgccg gtacggccat ggaatggcaa gatgaaaatc tagaaggggc 3961 agtggcctat aattccaccg cttgtttggg tgtggaacga aggctgcaac aacccgaaga 4021 ggagaaatat aagtgtatat tgtgttttga agaggcagtg gttagcaaag atggtcccac 4081 tttggtctac tcggcctttg tgcaaaagtc caaggttctc aaaccagagt ccaattacgc 4141 ttactccgta cacaccagca gttgtggcca tgtcatgcat gtcaactgct ggcaggaata 4201 ctacaacaat gaggagtcca aggaaatcag acgacccaga cgtcatccct tgcaagtttt 4261 cccctcatca ccgagcaccg agtttcagtg cccctattgc cgttgtctca gcaatactgt 4321 gctgcctcta acgcctccgc tctccaagta ttcggtacca aatgtattcc atgccggcga 4381 cgaaatgttc cccattgatt tgtggatcga aggcattcgt gtgtttagtg ataaacttaa 4441 taatctcata ttgaccgaag atcccgacct atggagtttc catttgcccg aatggctgcc 4501 cactctcaaa gaggcccaca tacccataga tcccaaacaa tttgaaaaaa tggcccagcc 4561 aacacagcgt ggtgaattgc cagttagttg gattaatttc gtacaacact acatgaaatc 4621 actgaaacgc aacgaggacg aaggtctgct gaatatgtgg cacacttgtg tgtacacagt 4681 gcaagctttg gaagtgtatc tgcgatctgt gggtaaaccc ttgaaggatg aaatgtccat 4741 acgtcaccag agttgtttga gtggcctaat acgggcttgt tgtctgtaca gtggtaattt 4801 gacacaaacc gatgttaaga gcttaatcaa acctgtggcc gaactcttga atgtggtgtt 4861 caaacataat ggcgattcag tgttggaatg gaactgcttc agcaaaatgg tatccacaat 4921 tatgatggta ccgaatatcc tcttcgcacg tgtccgagga gcttcggttg ttgccaatgg 4981 cagcttaatg gacttttata cgctacaagt tttcctattg gccaatgttg taaaatccat 5041 agttctgttt gagcagacag ccgaaggcct aatggacatt gaggaagaag attatgtggc 5101 gcttagtgat aaacaattgg aaaatatttc gatattcttt aacaaataca acatacaggc 5161 caggcaaaag gctaagatgg cagcggcggc ggcggcggcg cagacacagc agccaaagaa 5221 gtcagttagt aaagagagct cgcaggaaga gcaatcaaca acagttgcag cagagtctgc 5281 ggcaagcgat gatatcgatg ccggcatgac agatgtcaca caacaacaac agcagcaaca 5341 gtcaacaatt gccgaaccta aacccgaatt gttaagcccg cagttggtga cagccctgct 5401 ggatcatgtc aaaatggaaa tgcgtgaatt cctgcgttgt tcctgtctct tcttccactt 5461 tgtcaccgat gtggaattcc ccgatagtct ggccaccagc gaaagtgata cctttgagaa 5521 tatgtgtaaa tatctgggcc tcaacagcca actggagtcg tacttcgaca atgccacccc 5581 ctatgccaca attatggaaa tgtttgcctc gcatcatgat ataaccaact tggatgtggt 5641 gaccacaaaa atcaaaatga ccgatgatcc cctggtgata atgccctgca atcgtaccgt 5701 gccgcaactc gtcaatctgc ccgaggacta tagtgatctc atcaacagtg tctcggactt 5761 tagttgtccc aacaatgagc gcgaggagat gaagaccccc accatgtgtc tgatgtgtgg 5821 ggagatcttg tgtgcccaat cgtattgctg ccagcccgat ttggatagcc gcaatgtggg 5881 tgcctgcacc tatcatgcgt atttctgtgg agcggaaata gcacccttcc tgcgtatacg 5941 agattgccag attgtgtatt tgggcaagaa taagggatgc tttgtgcagc ccccctatct 6001 ggatgactat ggcgagacgg atcaaggcct aaggcgtggc aatcccctgc gtttgtgtcc 6061 agcccgctat agtaaaatac atctgacatg gttggcccat gggctgcatg aggagatagc 6121 gcgtctgaat gatcactcgt cggccataac cacacagtgg catcacatgt agttgcagtt 6181 gcagttgcgc tgcaagtcaa agtcaaatca tcattattat aatactatta ttaataatta 6241 ttaaattaat taaatgtcgt cgcacctatg caaaacaaac aaaaacaaaa cggaagtaaa 6301 aaccaacaac aacaacaaca ataacaacat agagtatata ctaaacaaac aaaacaacaa 6361 caacagcagt taatgtgatt taaattaaaa aaaaaacaaa taaacaaaaa tagataacaa 6421 caacaaaacg aaacgaaagc taatgcaata tctatgttaa ttcacctcct ccaggctagg 6481 gatatgctgt atgaagaaga agaaaaagaa ggaggaggtt tacaaacaaa ttaaacaaag 6541 ccctcctttc tctatctctc tctctctcac tctcatactc tcataaatga aaacacaaca 6601 ctcgtaatga atgtattaaa ctcaacacac tcacacaaag taaagattag aaaaaaaaaa 6661 caaaaa