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LOCUS XM_013245337 3247 bp mRNA linear INV 02-SEP-2023 homolog (LOC106082678), mRNA. ACCESSION XM_013245337 VERSION XM_013245337.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013245337.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3247 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3247 /gene="LOC106082678" /note="intraflagellar transport protein 52 homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106082678" CDS 1880..3181 /gene="LOC106082678" /codon_start=1 /product="intraflagellar transport protein 52 homolog" /protein_id="XP_013100791.1" /db_xref="GeneID:106082678" /translation="MTSKSVICFDISKNERFQITDNYKMLHRKLKSQWNIEQNDMELK PEKLAKVKIFIIAGPQDRFTEEEFEVLKVYVDNGGSLLVLLGEGGENEFNTNVNFFLE QYGIYINSDNVIRPHYYKNFHPKECSIGGGVVCESMWRYLLKQPVDKVDYDFSDEKYK LHFQYPYGATLNVSDPANVLLTTGPVVYPFNRPLAGYYCKEGGKGKILALGSGYMFHD KYLTSYKTNDSILEYILKLLGANDIQFNHLDFNDVELNENKTFTDIGFIADLPKACLI DSIGSEIPADFKKMFDMTLCSLSNRLLKDVINTYQQLNVKYEPLKIIKPQFEIPLPPL QLATFPPIFSEPAAPPLELYDLDEIFSPPRSQLANMTGQCLQALQSTKNPRKPPNLKE LENYIKECARITAIINEQHDMHIREILNIVAHQIVSYRPYD" misc_feature <1880..2221 /gene="LOC106082678" /note="ABC-type uncharacterized transport system; Region: ABC_transp_aux; cl23805" /db_xref="CDD:451555" misc_feature 2939..3169 /gene="LOC106082678" /note="C-terminal domain of intraflagellar transport protein 52 (IFT52) and similar proteins; Region: IFT52_CTD; cd23683" /db_xref="CDD:467897" ORIGIN 1 aatttctctg catattttca atttaaatga catttcaagt gagatacgga aaatgagaca 61 agaacaccac aaccatatat ctttctatta ttttgaccgt tctcaaaagc ataaacaaag 121 gtggatatat cagtctacct ttcctctatt ccacaccctc tagatggcat agatatcgct 181 cgaggttgga tgtgattgtc ggagccggaa gaattccgac cacctcatat cctaaaatac 241 ttggtgttgt tgttgtaact aaattttcat gtggaggtga cgatcctcgt caagctcctg 301 tagttgagca agctcgttcc ggttcaaagg accgatcgcc gcgggaacag agtggttatt 361 ggttatttaa aggcgccata caaacacaat ttaatattta caactgtgtt agtgtgccca 421 tagtgaggcc cagaggtttg catatccgcc tatgacgctg aacgcctggg ttcgaatcct 481 ggcgagacca tcagaaaaat tctcagcggt ggttttcccc tcctaatgct ggcaacattt 541 gtaggatact attccatgta aaacttctct ccaaagaggt gtcgcactgc ggactcggct 601 ataaaaagga ggtcccttat cattgagctt aaacttgaat cggtctgtac tcattgatat 661 gttccttagt ggaaagttca tgggaaaaat ttgtatttgt ttgtaagtgt gcccatcact 721 aatttagagt gtgagtttca gcgctacacg ataacctcta gatcatgcgg ctgtctaagg 781 cgccccgcta cccgagttgg tagcgtgctc gaatttgcca gtgcggggtc atgagttcga 841 ttccgaacag gccttgatct gtcgctactc tggtatcaca atggacataa aattgtctta 901 gtaagtctct aaaaggacta ccactcttac ctaacctagc cttcagacga gtctagatgg 961 ggtgcgtcca cagggatcag aaatatcgag tgagtctggc tgggcagtta gacaggtgac 1021 gtgtatcgtg cggtccctgg ttacaatctg gacatacatc ttgcacgtcg acatcagtcc 1081 ttgctctgta ggaattgagc cggctccatc tgctagaacg taattgagcc agaactactt 1141 tcgattgcca ggggaggtca atttcttcag gtgcaaaggg tggcggtcgt tctcctagga 1201 cgacattccg catctgctac catgtcagca tgaatgttgc ctagacgtgc ttgattgccg 1261 caaaattcct ggggcttgac actcaacaga atcaagtaga cgaaagatag aacacaacaa 1321 actgctacaa caacaacaac gagtctagat agcattcaca cggtggtaga agggatgaac 1381 agctaccgag tgaacgcagc ccttgtacat cgacagccaa caattgcacc agaaagagta 1441 agcctccctc ggctcagttg agttccggca gatgccagaa ctcctacaga gttaggattg 1501 atgtcagtgt gcttgatgta catatgtcca gattgtagcc tgggacccgc cacctgttta 1561 actgcccagc caatcctact agtcctagga ccacatgcct ctggactcac tcaacttagt 1621 tgcagatttt ctataactgt ccattttaca caaccccccg gtatatttat acacgcaagc 1681 ttaaattgaa ggttaaacaa tctgttgcat ctccttaggg cagtgaaact aaggcattac 1741 agagttgtat ccttacaaaa gtctttttta tgaaaaggat tttttccgtt gcctagcaac 1801 agccacgtag tttattgtaa aaaccattca gcatcatatt aaacagcaaa cgattgttca 1861 tttctattct accatcagga tgacctctaa aagtgtaatt tgctttgata tatcaaaaaa 1921 tgaacgcttt caaatcacag ataattacaa aatgttgcat cgcaaattga aatcccaatg 1981 gaacatagag caaaacgaca tggaacttaa gccggaaaaa ttggctaaag tcaaaatctt 2041 tattatagca ggaccccaag atcgttttac cgaagaggag tttgaggtgt tgaaggtcta 2101 cgtggataat ggtggcagtt tgttggtttt gctgggagaa ggaggcgaaa atgaattcaa 2161 taccaatgtg aatttctttt tggaacaata tggcatatac ataaatagtg acaatgtcat 2221 aagacctcac tattataaaa attttcaccc caaagaatgc tccataggag gtggagtggt 2281 ttgtgagtcc atgtggcgtt atttattaaa gcaacctgtc gacaaggtcg attatgattt 2341 cagtgatgag aagtataaac tacactttca atatccctat ggagccaccc tgaatgtttc 2401 tgacccagcc aatgtcttat tgaccacggg gccagtggtg tatcccttca acaggccttt 2461 ggctggctat tactgcaaag agggaggaaa gggtaaaatt ttggccttag gttccggcta 2521 catgtttcac gataagtacc taaccagcta caaaaccaat gattctatac tggaatatat 2581 tctcaagttg ttgggagcaa atgatataca gttcaatcat ttggacttta atgatgtgga 2641 gttaaatgag aataaaacct ttacggatat aggatttata gctgatttgc caaaggcttg 2701 ccttatcgat tctataggtt ccgaaattcc ggccgatttt aaaaaaatgt ttgacatgac 2761 cttgtgttcg ttgagcaatc gcctactgaa ggatgtcata aacacctatc aacagctgaa 2821 tgttaaatat gaacctctga aaataataaa gccacagttt gagatacccc tgccgcctct 2881 tcaattagct acatttcccc cgattttcag tgaacccgca gcaccgcctt tggaacttta 2941 cgatttggat gagatattta gtccaccccg ctcccaattg gccaatatga cgggtcaatg 3001 cttacaggct ttgcaatcaa ccaaaaatcc tcgcaaacca ccaaatttga aagaattgga 3061 aaattacata aaagaatgtg cccgcataac cgccatcata aacgagcagc atgatatgca 3121 tataagggaa attttgaata ttgtggccca tcaaattgtt agctatcgtc catatgatta 3181 gtaacaaaat ggagaagcaa tatattgtgt tgaggcttat aagcgcaaat acacttgata 3241 ttagaaa