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LOCUS XM_013245329 4899 bp mRNA linear INV 02-SEP-2023 (LOC106082675), transcript variant X4, mRNA. ACCESSION XM_013245329 VERSION XM_013245329.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013245329.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4899 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4899 /gene="LOC106082675" /note="cytosolic carboxypeptidase Nna1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106082675" CDS 228..4799 /gene="LOC106082675" /codon_start=1 /product="uncharacterized protein LOC106082675 isoform X4" /protein_id="XP_013100783.2" /db_xref="GeneID:106082675" /translation="MNIELTNLLKELYLESIFSVIIYIFWKLLQYYKRTTKTTMKKFP NNLPSFNNHQAIIMKNTGFLGSFLSKGLKTNQLEVNTDEKTLRPIARLKEPRDLFALP KDKDHDCSQQAPRWPIECQVIEERIAHIPTVPTQPEPFYQPTGKELKPNPVGEENGIV VFNYNPISAVNYDKTNNRSSNKHQDDDSSDSDVSSCESQGSTPDMKTSSKRLQKNANI ITQMLTTLEQRSSSNSNGEDDDDEDDTDNDEEVDADESGDRSLRSEADKKPTTWADEN PITEEQIDDIWANKSPEYRAATPTYIRNQFGKDVIAQKYGKVGSNDLPMGFEEKLIAG LQVVLSNRASSTLVEGNTDRNEDGHHHPPFYTVSNQFDMQEAENSFTSEYAKLKANPI FNPDMSLNLQELARPRDDPNNDVNNWTKAKNPKRDPCPSCSTTTIALNGGIENRFSFS LNPNEDTFRTSCSSPKAPCSCSHNQNQNFISNQYNSQANANATQQDCSPRSNAKDKLT KSHYLPQFSRSAVGGSKFLTNCHPYNPEEYDGLEFESRFESGNLAKAVQITPAYYELY LRPDLYTSRSRQWFYFRVRKTKRNMLYRFSIVNLIKSDSLYNDGMRPLMYSTHNAKTK NEGWVRCGDNICYYRNDDDNQPSEEEEDNSSYTLTFNVEFQNDNDTVYFAHSYPYTYS DLQDYLMEIQKNPTKSKFCKLRLLCRTLAGNNVYYLTVTTPAATEELMKRKKSIVISA RVHPSETPSSWMMKGLMDFITGDSSVAKRLRHKFIFKLIPMLNPDGVIVGNSRNSLTG KDLNRQYRTVIRETYPSIWYTKALIKRLIDECGVSMYCDMHAHSRRHNIFIYGCENKR NPEKKLTEQVFPLMLHKNVADKFSFENCKFKIQRSKEGTGRIVVWMLGITNSYTIEAS FGGSLLGSRKGTHFTTQDYEHMGRAFCETLLDYCDDNPNKECLRLKIIERLLKEGSSA EEPINIPLSDYSSDEGSSSSSDNEGKGSSSKDFSDLEGPCCHPLKAPPCSPELDIESR KPHKLKVRCKSLHRRKKEERLLLDLPTTDPGSDLVFSTDDEYIIDSNGIQCYGTMPRH IRRGLMQSELQRRYIEEMGDGLRNMPPELIITSPSNKSKHAPVKILFKPTTKKYVPPK SAELPLIGGPARRTSSWHNLNTASQTPVTPQWYSMNMPRQSQSPSPKPVMKTKTIAKK EPLSKEDLDIKLSLKKKIWTGIQPEDGLPHNGVDRNKPLSWVPPPPLKTPTKKNEGPS CSHNNTKRLENEAFLTACSQKLLEWQMINSNEGDEETTGLDKPTKLPLALMMPELNED HTMRIFKHLAQIKKPPKPKLETETKIKQKRNVITKVSETTNFIAKLSKTKTRTNLATS HRGTLAKQTVPGLSGISQHKSQTRNPNKFKTGGIVATAVQPTNTKNKTKKLKSSHKLS SGLQDAAMPPLKINGNNTSSSGGGIVIASTATTIVRKVKTKLKKKKSSPSPSTIVAAN TASLKENNSTLTTGYGNTTKSLLGGSCSS" polyA_site 4899 /gene="LOC106082675" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tataaaaatc atatggaaat tgacaatttc attatttatt tcttattata ttgccgtgtt 61 agtgttcatt tcttggccat aattgttttg tgtttattgg tatcgcgcta atgccaattg 121 acaaattatt acgaatcgat ggaacagcct tttcaaggat taaaatgcga aataaaacaa 181 ccgtcaaaca aatgaaattt ctcacgcgaa aataatccaa aaatgttatg aatattgaat 241 tgacaaatct gctgaaggag ctatatttgg aatctatttt ctctgtgatt atatatattt 301 tttggaaact tttgcaatac tacaaaagaa caacaaaaac cacaatgaaa aaattcccaa 361 acaatttgcc atcatttaat aaccatcaag ctatcatcat gaaaaatacc ggcttccttg 421 gtagttttct atcaaaaggc ttgaaaacca atcaattaga agtgaacacc gatgagaaaa 481 ccctacgacc catagcacgc ctcaaagagc cacgtgacct atttgccctg cccaaagata 541 aggatcatga ctgctcacaa caggccccca gatggccgat tgaatgtcag gtcattgaag 601 aacgtatcgc ccacattccg acagtaccca cacaacccga accattttat cagccgaccg 661 gcaaggaatt gaaacccaac cctgtgggtg aggaaaatgg cattgttgtc ttcaattaca 721 atcccataag tgcggtaaac tatgacaaaa ccaataatcg ttcgtccaac aaacatcaag 781 atgatgattc cagcgattca gatgtctcct cttgtgagtc tcaaggttcc acacccgata 841 tgaagacttc ctccaagaga ttgcaaaaga atgccaatat catcactcaa atgttgacaa 901 cattggagca gagatcctca agcaactcaa atggcgagga tgatgatgat gaagatgaca 961 ccgacaatga tgaggaggtt gatgccgatg aaagtggtga cagatcatta cgcagtgagg 1021 ctgacaagaa gcccacaaca tgggctgatg aaaatcccat aacagaagaa caaatcgatg 1081 atatatgggc caataaatca cccgagtaca gagctgccac acccacctat atacgcaatc 1141 aatttggaaa agatgttata gcacaaaaat atggcaaggt tggaagcaat gatttgccca 1201 tgggctttga agaaaaatta atcgctggct tgcaagtggt gcttagtaat agggcctcct 1261 cgactttagt tgaaggcaat acagaccgga atgaagatgg tcatcatcat cctcctttct 1321 atactgtttc caatcaattt gatatgcaag aagctgaaaa ttcctttacc tctgaatatg 1381 ccaaattaaa agcaaatcct atattcaatc ctgatatgtc cctgaatctc caagaattgg 1441 cccgacccag agatgatccc aacaacgatg taaataattg gacaaaagcc aaaaacccca 1501 aaagagatcc atgtccctct tgctccacaa ccaccatagc cttaaatggc ggcatagaga 1561 atagattttc cttttcctta aatcccaatg aagacacttt ccgcacatcc tgctcttccc 1621 ccaaggcacc ctgtagttgt agtcacaatc agaatcagaa ttttatttca aatcagtata 1681 atagccaagc aaatgcaaat gcaactcaac aagactgttc tcctaggagc aatgccaaag 1741 ataaattaac taaatctcat tatttaccac agtttagtcg ttcagcggtg ggtggttcga 1801 aatttctaac caattgtcat ccctacaatc ccgaggaata cgatggcctg gaattcgagt 1861 cacgtttcga gtcaggaaat ttggccaaag ccgtgcaaat aacaccggcc tactatgaat 1921 tatatctgcg tcccgatttg tataccagtc gttcgaggca atggttctat tttcgggtgc 1981 gcaaaacgaa aaggaatatg ttgtacagat tttccattgt gaatttaatc aaatcggata 2041 gtttgtacaa tgatggcatg cgccctctca tgtattccac ccataatgcc aaaacaaaga 2101 acgagggttg ggtgcgttgt ggtgacaaca tctgttacta tcgcaatgac gatgacaacc 2161 aacccagtga ggaggaggag gataactcat cctataccct aacatttaat gttgaatttc 2221 agaatgacaa cgataccgtt tactttgcac acagttatcc atacacctac agtgatttgc 2281 aggattattt aatggaaata caaaagaatc caaccaaatc gaaattctgc aaattaagac 2341 tgctgtgtcg cacattggcc ggcaacaatg tctactattt gaccgttaca actccggcgg 2401 caacagagga attaatgaag cgaaaaaaat ccatcgtcat atcggcacgt gttcatccaa 2461 gcgaaacacc atcgtcatgg atgatgaagg gtttgatgga tttcataacg ggcgattcgt 2521 cggtggccaa acgtttgcgt cacaaattca tcttcaaact gataccgatg ctcaatccag 2581 acggtgtcat agtgggcaac tcacgtaact cgctgactgg caaagatttg aatcgtcaat 2641 atcgcacggt tatacgtgaa acctatccat ccatatggta taccaaagct ttaattaaaa 2701 gactgattga tgaatgtggc gtttccatgt actgtgatat gcacgcacac tctcgccggc 2761 acaacatttt catttatggc tgtgagaata aacgtaaccc ggaaaagaag cttaccgaac 2821 aagtttttcc actcatgtta cacaaaaacg tagcagataa gttttccttt gaaaattgta 2881 aatttaaaat ccaacgcagc aaagagggca cggggcgcat tgtggtctgg atgctgggca 2941 tcacaaacag ctataccata gaagcatctt ttggtggttc gctgctggga tcacgcaaag 3001 gaacgcactt tacaacacag gattatgaac acatgggtcg tgcattttgt gaaacattgc 3061 tggactattg cgatgacaat ccgaacaaag aatgtttgag actgaagatc atagaacgtc 3121 tgctgaaaga aggatcaagt gccgaagagc ccataaatat accattatcg gattactcaa 3181 gtgatgaagg cagcagttcc agttccgaca atgaaggcaa aggatcttca tctaaagatt 3241 tttcagatct tgagggtccc tgttgtcatc cgctgaaagc tccaccctgt tcgccagaat 3301 tggatataga atcgagaaaa cctcacaaac tcaaggtgcg ctgtaaatct ctgcatcgcc 3361 gcaagaaaga ggaacgtctg ctattggatt tacccactac agatcctggt tcagatttgg 3421 tattttcaac cgatgatgaa tacatcatcg attcaaatgg aatacaatgc tatggcacca 3481 tgccaaggca cataagacga ggccttatgc aaagtgaact gcaaagacgt tacattgaag 3541 agatgggaga tggcctaaga aatatgccgc cagaattgat cataacctca ccctcgaata 3601 aaagtaaaca tgcaccagtg aagatactct ttaaaccaac tactaagaaa tatgtaccac 3661 caaaatcagc cgaactacca ttgataggtg gaccagcgag gaggacaagt tcatggcata 3721 acctaaatac agcttcacaa acgccagtaa caccacaatg gtattccatg aatatgccaa 3781 ggcaatcgca gtcaccttca cccaagccgg tgatgaagac gaaaaccatt gccaaaaagg 3841 aacccctaag caaggaagac ttggatataa aattatcgct gaaaaagaag atatggactg 3901 gtatacaacc cgaagatgga ctgccccata acggtgtcga tcgaaataaa cctctctcat 3961 gggtaccgcc accaccactt aaaacgccca ccaagaaaaa tgaggggcca tcgtgttcac 4021 acaacaatac caaaagattg gagaatgagg catttttgac agcttgcagc caaaaactat 4081 tggaatggca aatgatcaac tccaatgagg gcgacgaaga gactacaggt ttagataaac 4141 ccaccaaact gcccttggcc ttaatgatgc cagaactgaa tgaagatcat accatgagaa 4201 tattcaaaca tttggcccaa atcaaaaagc caccaaaacc caagcttgaa actgaaacga 4261 aaatcaaaca aaaaagaaat gtcatcacca aggtcagcga aaccacaaat tttatagcaa 4321 aacttagcaa aactaaaaca cgcaccaatt tggccacatc ccatcgtgga acgttagcga 4381 aacaaactgt gcctggcctc agtggcatta gccaacacaa gagccagaca cgcaatccca 4441 ataaattcaa gacaggtggc attgtggcca cagccgtcca accgaccaat accaaaaata 4501 agactaagaa gctgaaatct tcgcataaat taagttcagg actgcaagat gctgccatgc 4561 cccccttgaa aataaatggc aataatacct ccagtagtgg tggcggcatt gttatagcct 4621 cgactgccac cacaattgtg cgtaaagtta agacaaaatt gaaaaagaag aaatcatcac 4681 cgtccccgtc cacaatagtc gctgccaata ctgcctccct caaagaaaat aacagcacac 4741 tgaccacagg ctatggtaac acaacgaaaa gcctattagg tggcagttgt tcatcgtagg 4801 ggatggatga tgacacagat aacggtgaat aagcaaatgg tggataagat ttatgaaatt 4861 gtttagctaa aaataataat aaaatttttg tattaataa