Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Stomoxys calcitrans 26S proteasome non-ATPase regulatory


LOCUS       XM_013244520             970 bp    mRNA    linear   INV 02-SEP-2023
            subunit 8 (LOC106082166), mRNA.
ACCESSION   XM_013244520
VERSION     XM_013244520.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013244520.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..970
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..970
                     /gene="LOC106082166"
                     /note="26S proteasome non-ATPase regulatory subunit 8;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 12 Proteins"
                     /db_xref="GeneID:106082166"
     CDS             104..901
                     /gene="LOC106082166"
                     /codon_start=1
                     /product="26S proteasome non-ATPase regulatory subunit 8"
                     /protein_id="XP_013099974.1"
                     /db_xref="GeneID:106082166"
                     /translation="MSQLQSVETLYKELNTEWSKKPQNLKKCGQLLDQLKVALTKLAF
                     LPTKDVTSTKAEMILSRNVLEIAVEYSVATKDIPAFERYMSQLKCYYYDYKKEIGESE
                     NMFKLLGLNLLYLLSVNRVSEFHTELELLSAEIIHTNKYIGPILALEQYIMEGRYNKI
                     FQAKSCVPSEIYCYFMDMLLCTVRDEIAGCIEKAYDKISVQDSAKRLNLKTPEEVKSF
                     GKKRNWQLDNDGVYNFVDRSVKPKEILPSVELAEQAIFYARELEMIV"
     misc_feature    452..796
                     /gene="LOC106082166"
                     /note="CSN8/PSMD8/EIF3K family; Region: CSN8_PSD8_EIF3K;
                     pfam10075"
                     /db_xref="CDD:462954"
     polyA_site      970
                     /gene="LOC106082166"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gattaatcga ttagttaaaa gtcgactttt tgcaaatcat ccatcatcat cgtcttgttc
       61 atagcattca ggagaagttc gttttacaaa gaaataagaa aaaatgtccc aattacaaag
      121 tgtggaaaca ttatacaagg aattaaacac agaatggtct aaaaaacctc aaaacttaaa
      181 gaagtgtggg caactgctgg atcagttaaa ggttgctctt acgaaattgg cattcctgcc
      241 cacaaaagat gtgacatcga cgaaagcaga aatgattctt tcaaggaatg tattggaaat
      301 tgcggttgaa tacagtgtgg caacaaaaga tattccggct tttgagcgtt atatgtccca
      361 actgaaatgt tattattacg attacaagaa agaaataggt gaatccgaaa atatgtttaa
      421 attattggga ctgaacttat tgtacttgct gtctgtgaat cgtgtatctg aatttcacac
      481 cgaactcgag cttttgtcgg cggaaataat tcatacaaat aaatatattg gacccatatt
      541 agccttagaa caatatatta tggagggacg ttataataaa atattccaag ctaagagctg
      601 cgttccttcc gaaatatact gctatttcat ggacatgtta ttgtgtaccg tacgcgatga
      661 aattgctggg tgcattgaaa aggcatacga taaaatatct gttcaagatt ctgcaaaacg
      721 attgaacctt aagactccag aggaagttaa aagtttcggc aaaaaacgca attggcaatt
      781 agataatgat ggagtttaca attttgttga tagatctgta aagccgaaag aaattttacc
      841 ttcagtagaa ttggccgaac aggcaatatt ctatgcccgt gaattggaaa tgatagttta
      901 atacagtatc acgctaattg tatagattta ttcttcacat caataaaaca ctcattcatt
      961 tacaattgaa