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LOCUS XM_013244445 1972 bp mRNA linear INV 02-SEP-2023 variant X3, mRNA. ACCESSION XM_013244445 VERSION XM_013244445.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013244445.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1972 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1972 /gene="LOC106082110" /note="septin-1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins" /db_xref="GeneID:106082110" CDS 678..1760 /gene="LOC106082110" /codon_start=1 /product="septin-1 isoform X2" /protein_id="XP_013099899.1" /db_xref="GeneID:106082110" /translation="MSETKSFSSIETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGES GLGKSTLVNSLFLTDLYPERIIPDAIEKQKQTVKLEASTVEIEERGVKLRLTVVDTPG FGDAIDNSDSFSAILEYIDEQYERFLRDESGLNRRNIVDNRIHCCFYFISPFGHGLKP LDVEFMKKLHSKVNIVPVIAKADCLTKKEILRLKCRIMQEIEDHGIKIYPLPDCDSDE DEDYKEQVKQLKAAVPFAVCGANTLLEVKGKKVRGRLYPWGVVEVENPEHCDFIKLRT MLITHMQDLQEVTQEVHYENYRSDRLAKGIKNKENGIIKPERDSVVPTQIVLNEKDRI LQEKEAELRRMQEMLAQMQAKMQAQQ" misc_feature 774..1589 /gene="LOC106082110" /note="Region: Septin; pfam00735" /db_xref="CDD:395596" misc_feature 801..824 /gene="LOC106082110" /note="G1 box; other site" /db_xref="CDD:206649" misc_feature order(807..827,972..974,981..983,1215..1220,1224..1226, 1392..1397) /gene="LOC106082110" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206649" misc_feature 897..923 /gene="LOC106082110" /note="Switch I region; other site" /db_xref="CDD:206649" misc_feature 903..905 /gene="LOC106082110" /note="G2 box; other site" /db_xref="CDD:206649" misc_feature 972..983 /gene="LOC106082110" /note="G3 box; other site" /db_xref="CDD:206649" misc_feature order(978..1085,1086..1115) /gene="LOC106082110" /note="Switch II region; other site" /db_xref="CDD:206649" misc_feature 1215..1226 /gene="LOC106082110" /note="G4 box; other site" /db_xref="CDD:206649" misc_feature 1392..1400 /gene="LOC106082110" /note="G5 box; other site" /db_xref="CDD:206649" polyA_site 1972 /gene="LOC106082110" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtacgcgtga gccaagcagg ctatctcaag aaccagaagc cacggaaccc aaacagccaa 61 cttacggcaa tcgtaaacgt aataaatccg taatcgtata ccatatcggt gcaaaaagcc 121 ggtcgtcgat agcactaaat cggtcaaact cgtaggtgtt aacgcatgac gcgaaggtgt 181 ataaacttat tttgattctt tgtctgtcta cttcatcaac ataaaaaatt cgttaagtgt 241 gagaataaaa gcgaaaaacg aaaaaaaatt aaccagcaac aaagaaagaa agaaaaaacg 301 acgacgccgt gataaagaaa aaaaagctat tttatgtgtc atcatttaac aaatcttatt 361 gcattttgtg tatgttaaaa aatattggtt gttggtggct tacctttcgg agttctgttt 421 gttgagtgct gcagtgtgtg tgtgtatatg tgttattctg ttgccttttg tattgtctac 481 atgagcagca tgatagctgg agaagtcttc ttttgaggca aagcaccaaa ttaaaagaac 541 aagcagcaat atattttttt ccttggagag aagcggcgta agacacattt tctcaaagaa 601 aataaggagg aatataagaa aacgacaaaa atagtttcat agcgtgacag gaaaaaggga 661 ttaatcaagc aaataaaatg tcagaaacta aaagtttttc cagtatcgaa acacccggat 721 atgtggggtt tgccaatctt cccaatcagg tacatagaaa atcggtgaaa aagggttttg 781 aattcactct tatggttgtg ggcgaatcgg gtctgggaaa atccacactg gtcaatagtt 841 tgttcctaac agatctttat cccgaacgca taatacccga tgccatagaa aaacaaaaac 901 aaacggtgaa attggaagca tcaacagtgg aaattgaaga gcgtggtgtc aagctgcgtt 961 tgacggttgt ggatacacct ggtttcggtg atgccatcga taactcggac agttttagtg 1021 ccatattgga atacattgac gagcaatacg aaagatttct gcgtgacgag agtggcttaa 1081 atcgccgcaa tattgtggat aatcgtatac actgttgttt ctattttata tcgccatttg 1141 gtcatggttt aaaaccgctc gatgtggaat tcatgaagaa attacattcc aaagtcaata 1201 ttgtgcctgt gattgccaaa gccgattgcc ttacgaaaaa ggaaatacta cgtttgaaat 1261 gtcgcatcat gcaggaaatc gaagatcatg gcatcaaaat ctatcccttg ccggattgtg 1321 attcggatga agatgaggac tacaaggaac aggttaagca actgaaagca gcagtgccat 1381 ttgccgtttg tggagcaaat actctacttg aagttaaagg caagaaagtg cggggacgtt 1441 tatatccctg gggtgtagtg gaggtggaaa atccagaaca ctgtgatttc attaaactaa 1501 ggacgatgct aatcacccac atgcaagact tacaagaggt cacccaagag gtccattatg 1561 aaaactatcg ttcagatcgt ctggccaagg gcattaaaaa caaagagaat ggcatcatca 1621 agccagagcg cgactccgtg gtacccacac agatagtgtt gaatgaaaag gatcgaatac 1681 tgcaagaaaa ggaagccgag ttgagacgta tgcaggaaat gctggcacaa atgcaagcca 1741 aaatgcaagc gcaacaataa gtcattataa gacctcgtaa cggggtttgt tcaaacgaca 1801 aaacacacac tcccacaaaa acatgcatac atacatacaa caccctcacc ttttatctct 1861 aggcatatag aaattttata acacacacac acaagaaaaa tggtgccgaa tttcaaatgt 1921 ttttttacac atatatatat atatataaaa tgtagaatat ttaaaatctc aa