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LOCUS XM_013244444 2724 bp mRNA linear INV 02-SEP-2023 (LOC106082109), transcript variant X4, mRNA. ACCESSION XM_013244444 VERSION XM_013244444.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013244444.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2724 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2724 /gene="LOC106082109" /note="zinc finger protein 154; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106082109" CDS 527..2182 /gene="LOC106082109" /codon_start=1 /product="oocyte zinc finger protein XlCOF28 isoform X4" /protein_id="XP_013099898.1" /db_xref="GeneID:106082109" /translation="MESICRLCFQPAALFQVPGYNIPTCVKCSEHLTNSGNGFYQSVA ASAASGQPALSATAAAAAVAAVVNSTANSSNALNQQQMSQQQLQQPNQQQQQANQQTN QQQQQQQQQQQHQQLQNSTNSTNSLQSQDDSEDVDLIFNEEGSCPLCNKTFSRKSSLI THIRNHAAERKFVCNYCNKGFTQAANLRNHERIHTNDRPYVCVDCGKTFTQITNLNNH RRLHTGERPFVCIEPECGRSFAQVTNLNNHMKTHHKVQQYCCNQCPKKFTQVTSLNQH LQAHAGITGYYCPRCPEKTFKQQSQLHTHMKTHGLQYPFECTKCDEKFLQQTHLETHL KMHEEFKYKCNICPSSFNQESLLKKHEQRHLEGRYLTCPVASCNEAFAVRQHLSKHLL NSHSHTELPPPKRSKKCITLQPPQQPLAMVGQPLSLQHAPQRGRPPKNKSKVNALNIP SLIKVDINDVLPYNQSVLSNVSGLSIPQQINQHLQQQQQQQQAQQQAQQQLLQHVQQQ AQQHALQQQQQAQQQEQQQLSAQQQLLQGNQVKVRYIPNTQIK" misc_feature <935..1606 /gene="LOC106082109" /note="FOG: Zn-finger [General function prediction only]; Region: COG5048" /db_xref="CDD:227381" misc_feature 962..1024 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1046..1108 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(1061..1063,1067..1069,1073..1075,1079..1084, 1091..1096,1103..1105,1145..1147,1151..1153,1163..1168, 1175..1180,1187..1189,1235..1237,1241..1243,1247..1249, 1253..1258,1265..1270,1277..1279) /gene="LOC106082109" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1130..1192 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1214..1282 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1307..1366 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1388..1453 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1475..1537 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1556..1618 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1640..1699 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" ORIGIN 1 attggtagac gagaaaaaaa aattttattt tggttagcat aaaaaaagtt ccaatggtca 61 agcaaataca aagaatataa acaaacgcca aacagaacaa atgcaaaaga actaaataaa 121 aaacgaacaa gaaaattatg aaataactga acgagttgaa agatttgtgg ttaacaccaa 181 cacacaaagg cgtttgtgca cacttgagct ggtgctagtt gaagtgaata agaaaatata 241 acagaaaaaa aatatataca tatgtgttgt gacgtcgcgc ttagttttct tagcgggaac 301 aaaagtgtaa ttattgaaga aattgtacat tgaagatggc atagacctcc ccggttggcc 361 ggtgtgctaa gtgacaattg aagacttttt tccgtgttcc cagccatcca atagaggact 421 tcgtaaatta aaccagttca ttgagaaaaa aaggagtccc cattgttggt gaacttccag 481 tttatcgcca ttggacgtgg tctgtactaa gcatcgcggc ggtgccatgg aaagcatctg 541 cagattatgt ttccaaccgg cagcgttgtt tcaagttccc ggctataata tacccacctg 601 tgttaagtgc tcagaacatt tgacaaatag tggtaatggc ttttatcaat cagtagctgc 661 ctccgctgcc tcgggacaac cggcattgtc ggcaacagct gctgctgccg ccgtcgctgc 721 tgtggtaaac agtaccgcga attcttcgaa tgcattgaat caacagcaaa tgtctcagca 781 acaacttcaa caaccgaatc aacaacaaca gcaggcgaat caacaaacga atcaacagca 841 acaacaacag cagcaacagc aacaacacca gcaactgcaa aattccacaa attcaacaaa 901 tagtctacag tcgcaggacg attcagaaga tgtggactta atatttaacg aagaaggctc 961 atgtcctttg tgtaataaga cattctcaag gaagtcctcc ttgataacac acatacgtaa 1021 tcatgcggcc gaaagaaaat ttgtttgtaa ttattgtaat aaaggtttta ctcaagcagc 1081 caatttgcgg aatcatgaac gtatacatac caacgatcgt ccgtatgtgt gtgtggattg 1141 tggcaaaacg tttactcaga ttaccaacct caacaatcat cgacgactgc atacgggcga 1201 acggcctttt gtgtgcatcg aaccggagtg tggacgctcc tttgcccagg tcactaatct 1261 caataatcac atgaaaaccc accacaaagt ccagcaatac tgttgcaatc aatgtccgaa 1321 gaaattcacc caggtcacct cgctcaatca gcatctgcag gcacatgcgg gcatcaccgg 1381 ctactattgt ccccgttgtc cggagaaaac gttcaaacag caatcgcaac tgcatacgca 1441 catgaaaacg cacggcctgc aatatccctt cgaatgtacg aaatgtgatg agaaattctt 1501 gcagcaaacg catctggaga cgcacttgaa gatgcacgaa gaattcaaat acaaatgcaa 1561 tatctgtccg agttcgttca atcaggagtc actgctgaaa aagcacgagc aacgtcattt 1621 agagggcaga tacctcactt gccctgtggc cagttgtaat gaggcctttg ctgttcgcca 1681 acatctctcg aaacatttgt taaatagtca ctcacatacg gaattaccgc ctccgaaacg 1741 ctccaagaaa tgcataacac tacaaccgcc tcaacaacca ttggctatgg tgggccagcc 1801 attgtcgctg caacatgctc cccaacgtgg tcgtcctccc aaaaataaat ccaaggttaa 1861 cgctttgaac ataccctcat tgatcaaagt cgacatcaac gatgttctgc cttataatca 1921 gagcgttttg agcaatgtca gcggcctatc gataccccag caaatcaatc agcatctgca 1981 acagcagcag caacaacagc aggcccaaca gcaggcccag caacagttgt tgcaacacgt 2041 ccaacagcag gcgcagcaac acgccctaca gcagcaacaa caggcccagc agcaggaaca 2101 acagcaactg agtgcccagc agcagttgtt gcagggcaat caggtgaagg tgcgctacat 2161 acccaatacg cagatcaaat aaaatccctt tctgccgttt cctgtgccag cattaacagc 2221 attgcccttt ccccacttgg aacggtgata cggagtggcg tcgtcgtagt catcaccaac 2281 atcataatga gcaacgtcgt cgtcgttgtt gtcgtcttct cagttaaagc aaacgttttt 2341 aactattctc taattattat tattaagaag aagaagaaga aaatcagctg aaaaaaagaa 2401 gaagaagaat aagaaaagca agaagcagct gaaaaacaag aagaagaaga attttaaaaa 2461 aagattagca tagaatgttt ttttttttat ttttttttgt tttcttttaa atccctcacc 2521 ccagaacgac gaatgtgagt gctcccttta caaaaagaaa accctgcata ggtttttaga 2581 tgtaaaactt tacattttta tggaattctg ttcttccttg aatatatata tatgaatgaa 2641 tgattgaata tatgcaatgt aataattaat ttaaatttgt aagattgtat aatgtattgt 2701 actaacgttt tttttttaac aatt