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LOCUS XM_013244443 2950 bp mRNA linear INV 02-SEP-2023 (LOC106082109), transcript variant X2, mRNA. ACCESSION XM_013244443 VERSION XM_013244443.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013244443.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2950 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2950 /gene="LOC106082109" /note="zinc finger protein 154; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106082109" CDS 527..2407 /gene="LOC106082109" /codon_start=1 /product="zinc finger protein 154 isoform X2" /protein_id="XP_013099897.1" /db_xref="GeneID:106082109" /translation="MESICRLCFQPAALFQVPGYNIPTCVKCSEHLTNSGNGFYQSVA ASAASGQPALSATAAAAAVAAVVNSTANSSNALNQQQMSQQQLQQPNQQQQQANQQTN QQQQQQQQQQQHQQLQNSTNSTNSLQSQDDSEDTTVQQQQQQPTRRPRQNGVKNKLQQ ITMSSYELEKTIQHLDVDLVSCPLCNKTFSGNSSLISHIRNHAAEVLIFTVDLIFNEE GSCPLCNKTFSRKSSLITHIRNHAAERKFVCNYCNKGFTQAANLRNHERIHTNDRPYV CVDCGKTFTQITNLNNHRRLHTGERPFVCIEPECGRSFAQVTNLNNHMKTHHKVQQYC CNQCPKKFTQVTSLNQHLQAHAGITGYYCPRCPEKTFKQQSQLHTHMKTHGLQYPFEC TKCDEKFLQQTHLETHLKMHEEFKYKCNICPSSFNQESLLKKHEQRHLEGRYLTCPVA SCNEAFAVRQHLSKHLLNSHSHTELPPPKRSKKCITLQPPQQPLAMVGQPLSLQHAPQ RGRPPKNKSKVNALNIPSLIKVDINDVLPYNQSVLSNVSGLSIPQQINQHLQQQQQQQ QAQQQAQQQLLQHVQQQAQQHALQQQQQAQQQEQQQLSAQQQLLQGNQVKVRYIPNTQ IK" misc_feature 1070..1132 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature <1151..1831 /gene="LOC106082109" /note="FOG: Zn-finger [General function prediction only]; Region: COG5048" /db_xref="CDD:227381" misc_feature 1187..1249 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1271..1333 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(1286..1288,1292..1294,1298..1300,1304..1309, 1316..1321,1328..1330,1370..1372,1376..1378,1388..1393, 1400..1405,1412..1414,1460..1462,1466..1468,1472..1474, 1478..1483,1490..1495,1502..1504) /gene="LOC106082109" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 1355..1417 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1439..1507 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1532..1591 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1613..1678 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1700..1762 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1781..1843 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1865..1924 /gene="LOC106082109" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" ORIGIN 1 attggtagac gagaaaaaaa aattttattt tggttagcat aaaaaaagtt ccaatggtca 61 agcaaataca aagaatataa acaaacgcca aacagaacaa atgcaaaaga actaaataaa 121 aaacgaacaa gaaaattatg aaataactga acgagttgaa agatttgtgg ttaacaccaa 181 cacacaaagg cgtttgtgca cacttgagct ggtgctagtt gaagtgaata agaaaatata 241 acagaaaaaa aatatataca tatgtgttgt gacgtcgcgc ttagttttct tagcgggaac 301 aaaagtgtaa ttattgaaga aattgtacat tgaagatggc atagacctcc ccggttggcc 361 ggtgtgctaa gtgacaattg aagacttttt tccgtgttcc cagccatcca atagaggact 421 tcgtaaatta aaccagttca ttgagaaaaa aaggagtccc cattgttggt gaacttccag 481 tttatcgcca ttggacgtgg tctgtactaa gcatcgcggc ggtgccatgg aaagcatctg 541 cagattatgt ttccaaccgg cagcgttgtt tcaagttccc ggctataata tacccacctg 601 tgttaagtgc tcagaacatt tgacaaatag tggtaatggc ttttatcaat cagtagctgc 661 ctccgctgcc tcgggacaac cggcattgtc ggcaacagct gctgctgccg ccgtcgctgc 721 tgtggtaaac agtaccgcga attcttcgaa tgcattgaat caacagcaaa tgtctcagca 781 acaacttcaa caaccgaatc aacaacaaca gcaggcgaat caacaaacga atcaacagca 841 acaacaacag cagcaacagc aacaacacca gcaactgcaa aattccacaa attcaacaaa 901 tagtctacag tcgcaggacg attcagaaga tactacagtt cagcaacagc aacagcaacc 961 aacgcgccgt ccacgtcaaa acggtgttaa aaataaatta caacaaatca ccatgtcctc 1021 ctatgaattg gagaagacca tacaacattt agatgtggac ttagtatctt gtcctttatg 1081 taataaaaca ttttcaggga actcatcctt gatctcacat atacgtaatc atgcagctga 1141 agtgctaata tttacagtgg acttaatatt taacgaagaa ggctcatgtc ctttgtgtaa 1201 taagacattc tcaaggaagt cctccttgat aacacacata cgtaatcatg cggccgaaag 1261 aaaatttgtt tgtaattatt gtaataaagg ttttactcaa gcagccaatt tgcggaatca 1321 tgaacgtata cataccaacg atcgtccgta tgtgtgtgtg gattgtggca aaacgtttac 1381 tcagattacc aacctcaaca atcatcgacg actgcatacg ggcgaacggc cttttgtgtg 1441 catcgaaccg gagtgtggac gctcctttgc ccaggtcact aatctcaata atcacatgaa 1501 aacccaccac aaagtccagc aatactgttg caatcaatgt ccgaagaaat tcacccaggt 1561 cacctcgctc aatcagcatc tgcaggcaca tgcgggcatc accggctact attgtccccg 1621 ttgtccggag aaaacgttca aacagcaatc gcaactgcat acgcacatga aaacgcacgg 1681 cctgcaatat cccttcgaat gtacgaaatg tgatgagaaa ttcttgcagc aaacgcatct 1741 ggagacgcac ttgaagatgc acgaagaatt caaatacaaa tgcaatatct gtccgagttc 1801 gttcaatcag gagtcactgc tgaaaaagca cgagcaacgt catttagagg gcagatacct 1861 cacttgccct gtggccagtt gtaatgaggc ctttgctgtt cgccaacatc tctcgaaaca 1921 tttgttaaat agtcactcac atacggaatt accgcctccg aaacgctcca agaaatgcat 1981 aacactacaa ccgcctcaac aaccattggc tatggtgggc cagccattgt cgctgcaaca 2041 tgctccccaa cgtggtcgtc ctcccaaaaa taaatccaag gttaacgctt tgaacatacc 2101 ctcattgatc aaagtcgaca tcaacgatgt tctgccttat aatcagagcg ttttgagcaa 2161 tgtcagcggc ctatcgatac cccagcaaat caatcagcat ctgcaacagc agcagcaaca 2221 acagcaggcc caacagcagg cccagcaaca gttgttgcaa cacgtccaac agcaggcgca 2281 gcaacacgcc ctacagcagc aacaacaggc ccagcagcag gaacaacagc aactgagtgc 2341 ccagcagcag ttgttgcagg gcaatcaggt gaaggtgcgc tacataccca atacgcagat 2401 caaataaaat ccctttctgc cgtttcctgt gccagcatta acagcattgc cctttcccca 2461 cttggaacgg tgatacggag tggcgtcgtc gtagtcatca ccaacatcat aatgagcaac 2521 gtcgtcgtcg ttgttgtcgt cttctcagtt aaagcaaacg tttttaacta ttctctaatt 2581 attattatta agaagaagaa gaagaaaatc agctgaaaaa aagaagaaga agaataagaa 2641 aagcaagaag cagctgaaaa acaagaagaa gaagaatttt aaaaaaagat tagcatagaa 2701 tgtttttttt tttatttttt tttgttttct tttaaatccc tcaccccaga acgacgaatg 2761 tgagtgctcc ctttacaaaa agaaaaccct gcataggttt ttagatgtaa aactttacat 2821 ttttatggaa ttctgttctt ccttgaatat atatatatga atgaatgatt gaatatatgc 2881 aatgtaataa ttaatttaaa tttgtaagat tgtataatgt attgtactaa cgtttttttt 2941 ttaacaattt