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LOCUS XM_013244440 3974 bp mRNA linear INV 02-SEP-2023 transcript variant X5, mRNA. ACCESSION XM_013244440 VERSION XM_013244440.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013244440.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3974 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3974 /gene="LOC106082107" /note="cytospin-A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106082107" CDS 352..3534 /gene="LOC106082107" /codon_start=1 /product="cytospin-A" /protein_id="XP_013099894.1" /db_xref="GeneID:106082107" /translation="MIKLKSLFRRGQTPSQSSSKHSSSSNSSNNNRNKSQSTQSLNTA IENEDKKQQAGAGATSTKFYPDAQNPPIVQIEGSSSERGVDVGDDRLNNSYHSLEANQ LAQANAGAIAAGQHAHTLPHKKSKGGTSKKGQKQPKPLPVAPKGTAPTVVAPPPGVGG DVVMSSMAAVAPGSQSSSVQPGSATSLSTSHSNPAISATTANAAGTSANDLYALNPAF MAAAAAASYQFINNEQQQILEASNIKMQELQSQLDRLARDKMLAESRVTELLPYQNEV TKLKSDLVKMQSAQEKHQLEITNLKYENESLRTRLRDVVNSPLSDAEKHQIIQDSQRL HSSAPASIALPTSSDNDNGGTPCLTPDWDKHSSSSEISVACLQDKIIQMEETHYSTNE ELQATLQELSDLQAQLSDAQTENERLAEEKDVLFQSLCRQTEKLNDSRTQINNLQELL LRDAKQNTAEEAVSSEREKKLMDLIKTAQDEREAALVKQEELNAELQDLRQTNESYTA EQTRLRERIALLESSIDAEHSQRKQMELQLQAAKEEISHGIIEINRLTTLLENAKSKI EELEQDLARGDKTDLSDLLDAARKEKDLLEEKVAEIQDQWSRSQAEVRRLKDQIADLT EELKVSKNNSKCALSHLEYRLDQVQQEKDKLSAEHQQLCESTSELQVQCKCHLEDKNQ LQSLLSETQKHLADVERKLNDTQQQLEDLQQLRKQEAEEWQQFQSDLLMTVRVANDFK TEALSAREQLVLDNKTQKEKIRMLEQQIEKLNKQQQQQTETQQSVYNTVSTVQQEMAS RRSKVGSFSRQDSRLSVKTLIESIENNKQTAKAEEPESRYSSSSSLNSSSTPEITPSA IPLVTTNTNNPDWSENVSRLTPLIGSLNTATTAAAPNNITTPMVPALTTATTKGPLRE QQQQQSVVSNLHISSLNNVSKSLLSGERKDPLNMLAKNGGSKRNALLKWCQNKTVGYR NIEITNFSSSWNDGLAFCAILHSYLPDRIPYDTLSPANKRRNFSLAFAAAESVGIPTT LNINDMCQIERPDWTQIMSYVTAIYKYFET" misc_feature <1030..>2067 /gene="LOC106082107" /note="Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; Region: YhaN; COG4717" /db_xref="CDD:443752" misc_feature 1570..>2601 /gene="LOC106082107" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:274008" misc_feature 3193..3528 /gene="LOC106082107" /note="calponin homology (CH) domain found in the cytospin family; Region: CH_CYTS; cd21199" /db_xref="CDD:409048" misc_feature order(3217..3219,3229..3231,3379..3381,3385..3390, 3397..3402,3406..3408,3430..3456,3478..3480,3484..3489, 3493..3498,3505..3510,3517..3519) /gene="LOC106082107" /note="putative actin binding site [polypeptide binding]; other site" /db_xref="CDD:409048" polyA_site 3974 /gene="LOC106082107" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcatcgtacg agcgaagttg gtcggatgtt tggcgcggcg ggttgatcga gcggttgatt 61 ttgtgtttgt gtgtgtgtgt tgtgtccctc aacaaaagtc gctacaaatg aactaaaatg 121 aactggaaat gtgtaatgaa ccataccatc gaaatatttt ataaaaagaa caacaacgat 181 cttagaaaga aaagtgtttc gtcaaactcg aaaattcgtc ttttgttata aaaaaaagag 241 agcaatataa aaaaaatcga accaccttgg ggaaattggt acaagaattt ctcagaacta 301 caacgacact ctgtccataa ttacaaccaa caatactaaa aatttggcaa aatgattaaa 361 ttgaaatcac tgtttcgcag agggcaaacc ccctcacagt cctcgtctaa acattccagc 421 agcagcaaca gtagtaacaa caatcgcaac aaatcccaat caacccagtc tctgaacact 481 gccatcgaga acgaggataa aaagcaacag gctggagcag gagcaacatc aacgaaattt 541 tatcctgatg cccagaatcc ccccattgtg caaatagaag gttcatcgag tgaacgcggt 601 gttgatgtgg gcgatgatcg tttgaataat agctatcata gtttggaagc gaatcaattg 661 gcacaagcca acgctggcgc tattgcagct ggacaacacg ctcacacttt accccacaaa 721 aagagtaagg gaggtacatc gaaaaagggc caaaaacaac caaagccttt gccagttgcc 781 cccaaaggca ctgcaccaac ggttgttgct cctccaccgg gtgtaggcgg cgatgtagta 841 atgtcttcaa tggctgctgt ggcaccaggt tcccaaagct cttccgttca gccgggctct 901 gcgacctcgt tatcaacatc acactctaac cctgccatat cagcgacgac agctaatgct 961 gctggtactt ccgccaatga tttgtatgcc ttaaatcctg catttatggc tgccgcagca 1021 gcagccagct atcagtttat caacaacgaa caacaacaaa ttctagaggc ttcaaatatt 1081 aaaatgcaag agttgcaatc ccaactggat cgtttggctc gtgataaaat gctggcagaa 1141 tcacgagtca cagaattgtt gccgtatcaa aacgaagtaa ccaaactaaa aagtgattta 1201 gtgaaaatgc agagtgccca agagaagcat cagttggaaa tcaccaattt gaaatatgaa 1261 aatgagtcgt tgagaacccg tttgagagac gttgtcaact caccgctatc cgatgcggaa 1321 aagcaccaaa tcatacaaga ttcccagcgt ctacatagtt ctgcgccagc ctccattgca 1381 ctaccgacat cctcagacaa tgataatggt ggcacacctt gccttacgcc cgactgggat 1441 aagcattcct cttctagtga aatatctgta gcttgtctgc aagataagat catacaaatg 1501 gaagagaccc attactcgac caatgaagaa ttgcaagcca ctctccagga actatccgat 1561 ttgcaggctc aattgagtga tgcccaaacc gagaatgaac gtttagccga agaaaaggac 1621 gttctctttc agtcgttgtg tcggcaaact gaaaaactca acgattctcg cacccaaatc 1681 aataatctac aagaactttt gctaagagat gctaaacaaa acaccgccga agaggctgtt 1741 tcctcggaaa gggaaaagaa attaatggat ctaatcaaaa ctgcccaaga tgaacgtgaa 1801 gcggccttag tcaagcagga ggaactcaat gctgaactgc aagatttaag gcaaaccaat 1861 gaaagctata cggcagagca aacccgcctt agggaacgca ttgctctgct agagtcctcc 1921 atagatgcgg aacattctca gcgcaaacaa atggaactac aactgcaagc agccaaagag 1981 gaaatatcac atggtataat cgaaataaat cgattgacca ccctactaga gaatgccaaa 2041 tcaaaaattg aagaactcga acaggatctg gctcgaggcg ataaaaccga tcttagtgat 2101 cttttagatg cggcgcgcaa agaaaaagac ttattggaag aaaaagtagc cgaaatacaa 2161 gatcagtggt ctcgcagtca ggccgaggtt aggcgactca aggatcaaat tgccgattta 2221 actgaggaac tcaaagtttc caaaaacaat tcgaaatgtg ccctctccca tctcgaatac 2281 cggctggacc aagttcaaca ggagaaggat aagctttcag ccgaacacca acaactctgc 2341 gagagtacaa gtgaattaca agtgcaatgc aaatgtcatt tggaggacaa aaatcaactc 2401 cagtcactgc tgagtgaaac gcaaaaacat ttggctgacg tcgaacgtaa attaaacgac 2461 acccaacagc aactggaaga tttgcaacaa ttacgaaaac aagaagccga agaatggcaa 2521 caattccaat cggatctact gatgaccgtg cgggtagcca atgattttaa gactgaagcc 2581 cttagtgcta gagaacaatt agtattggat aataagacgc aaaaggagaa aatacgtatg 2641 ttggaacaac aaattgagaa attaaacaaa caacaacaac aacaaaccga gacacagcaa 2701 tcagtgtaca acacagtatc gactgtacaa caagaaatgg cctcgagacg cagcaaagta 2761 ggcagctttt caagacaaga ctcacgtttg tctgtcaaaa ctttaattga aagcatagaa 2821 aataataaac agaccgctaa agcagaggag ccagagtctc gctacagctc ttcatcaagt 2881 ttaaatagta gtagtactcc agaaataaca cccagtgcta taccgttagt cactaccaat 2941 acgaacaatc cagactggtc tgaaaatgtt tctagactta cacccttaat aggcagctta 3001 aatactgcaa caacggcagc agcacccaat aatattacaa caccaatggt accagcattg 3061 acaacagcaa caaccaaggg cccactaaga gaacagcaac aacaacaatc tgtagtatcc 3121 aatttacaca taagcagtct caacaatgtt tccaaatctc tgttaagtgg tgaacgcaaa 3181 gatcctttga acatgctggc taagaatggt ggttcaaagc gcaatgcttt gttgaaatgg 3241 tgtcaaaata aaactgtcgg ttatcgcaat atagaaatca caaatttcag ttcatcctgg 3301 aatgatggct tggcattttg tgcaatttta cattcctatt taccggatcg cattccttat 3361 gatactttaa gtccagccaa caaaagacgt aatttctcat tggcctttgc ggcagctgaa 3421 agcgttggta tacccacaac actgaacatc aatgatatgt gtcaaatcga acgtcccgat 3481 tggactcaaa taatgtctta tgttacagct atttataaat attttgaaac ttaagtgcat 3541 cgctttgcat tgcattgtat tgcatattta tgatttacaa ttttatttaa ttttttaacg 3601 gcatactata atttttaaca actgttggct catattttta ttgttaacga aatacaaatg 3661 ttatttttta ttatatatac ataaatacat aggcgcgagc tcctttcctt ttcctcatac 3721 acctcgaaac gttcgcgttg aatcttttaa taatttttga ttttatccat actttactcg 3781 taccaacaac cacccctctg aatgaagcca aattttttta tttttttttt tcatttcatt 3841 attatttttt ttattattta tttaattgtg cattcttctt ttaattacaa aatacaataa 3901 ttataataaa ttttcaatta agaatatgta aatattttgc aaaagatcca ttataagcta 3961 ctaaaataaa ctat