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LOCUS XM_013244438 4064 bp mRNA linear INV 02-SEP-2023 transcript variant X4, mRNA. ACCESSION XM_013244438 VERSION XM_013244438.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013244438.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4064 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..4064 /gene="LOC106082107" /note="cytospin-A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106082107" CDS 442..3624 /gene="LOC106082107" /codon_start=1 /product="cytospin-A" /protein_id="XP_013099892.1" /db_xref="GeneID:106082107" /translation="MIKLKSLFRRGQTPSQSSSKHSSSSNSSNNNRNKSQSTQSLNTA IENEDKKQQAGAGATSTKFYPDAQNPPIVQIEGSSSERGVDVGDDRLNNSYHSLEANQ LAQANAGAIAAGQHAHTLPHKKSKGGTSKKGQKQPKPLPVAPKGTAPTVVAPPPGVGG DVVMSSMAAVAPGSQSSSVQPGSATSLSTSHSNPAISATTANAAGTSANDLYALNPAF MAAAAAASYQFINNEQQQILEASNIKMQELQSQLDRLARDKMLAESRVTELLPYQNEV TKLKSDLVKMQSAQEKHQLEITNLKYENESLRTRLRDVVNSPLSDAEKHQIIQDSQRL HSSAPASIALPTSSDNDNGGTPCLTPDWDKHSSSSEISVACLQDKIIQMEETHYSTNE ELQATLQELSDLQAQLSDAQTENERLAEEKDVLFQSLCRQTEKLNDSRTQINNLQELL LRDAKQNTAEEAVSSEREKKLMDLIKTAQDEREAALVKQEELNAELQDLRQTNESYTA EQTRLRERIALLESSIDAEHSQRKQMELQLQAAKEEISHGIIEINRLTTLLENAKSKI EELEQDLARGDKTDLSDLLDAARKEKDLLEEKVAEIQDQWSRSQAEVRRLKDQIADLT EELKVSKNNSKCALSHLEYRLDQVQQEKDKLSAEHQQLCESTSELQVQCKCHLEDKNQ LQSLLSETQKHLADVERKLNDTQQQLEDLQQLRKQEAEEWQQFQSDLLMTVRVANDFK TEALSAREQLVLDNKTQKEKIRMLEQQIEKLNKQQQQQTETQQSVYNTVSTVQQEMAS RRSKVGSFSRQDSRLSVKTLIESIENNKQTAKAEEPESRYSSSSSLNSSSTPEITPSA IPLVTTNTNNPDWSENVSRLTPLIGSLNTATTAAAPNNITTPMVPALTTATTKGPLRE QQQQQSVVSNLHISSLNNVSKSLLSGERKDPLNMLAKNGGSKRNALLKWCQNKTVGYR NIEITNFSSSWNDGLAFCAILHSYLPDRIPYDTLSPANKRRNFSLAFAAAESVGIPTT LNINDMCQIERPDWTQIMSYVTAIYKYFET" misc_feature <1120..>2157 /gene="LOC106082107" /note="Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; Region: YhaN; COG4717" /db_xref="CDD:443752" misc_feature 1660..>2691 /gene="LOC106082107" /note="chromosome segregation protein SMC, common bacterial type; Region: SMC_prok_B; TIGR02168" /db_xref="CDD:274008" misc_feature 3283..3618 /gene="LOC106082107" /note="calponin homology (CH) domain found in the cytospin family; Region: CH_CYTS; cd21199" /db_xref="CDD:409048" misc_feature order(3307..3309,3319..3321,3469..3471,3475..3480, 3487..3492,3496..3498,3520..3546,3568..3570,3574..3579, 3583..3588,3595..3600,3607..3609) /gene="LOC106082107" /note="putative actin binding site [polypeptide binding]; other site" /db_xref="CDD:409048" polyA_site 4064 /gene="LOC106082107" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gttcatcgta cgagcgaagt tggtcggatg tttggcgcgg cgggttgatc gagcggttga 61 ttttgtgttt gtgtgtgtgt gttgtgtccc tcagtaaata ggagtttgtg tgaaattttg 121 ttggcttttc tttgcccaca aaacttctac aaagcgatcg gttgctgtat tcgttgtttt 181 tacaaaagtc gctacaaatg aactaaaatg aactggaaat gtgtaatgaa ccataccatc 241 gaaatatttt ataaaaagaa caacaacgat cttagaaaga aaagtgtttc gtcaaactcg 301 aaaattcgtc ttttgttata aaaaaaagag agcaatataa aaaaaatcga accaccttgg 361 ggaaattggt acaagaattt ctcagaacta caacgacact ctgtccataa ttacaaccaa 421 caatactaaa aatttggcaa aatgattaaa ttgaaatcac tgtttcgcag agggcaaacc 481 ccctcacagt cctcgtctaa acattccagc agcagcaaca gtagtaacaa caatcgcaac 541 aaatcccaat caacccagtc tctgaacact gccatcgaga acgaggataa aaagcaacag 601 gctggagcag gagcaacatc aacgaaattt tatcctgatg cccagaatcc ccccattgtg 661 caaatagaag gttcatcgag tgaacgcggt gttgatgtgg gcgatgatcg tttgaataat 721 agctatcata gtttggaagc gaatcaattg gcacaagcca acgctggcgc tattgcagct 781 ggacaacacg ctcacacttt accccacaaa aagagtaagg gaggtacatc gaaaaagggc 841 caaaaacaac caaagccttt gccagttgcc cccaaaggca ctgcaccaac ggttgttgct 901 cctccaccgg gtgtaggcgg cgatgtagta atgtcttcaa tggctgctgt ggcaccaggt 961 tcccaaagct cttccgttca gccgggctct gcgacctcgt tatcaacatc acactctaac 1021 cctgccatat cagcgacgac agctaatgct gctggtactt ccgccaatga tttgtatgcc 1081 ttaaatcctg catttatggc tgccgcagca gcagccagct atcagtttat caacaacgaa 1141 caacaacaaa ttctagaggc ttcaaatatt aaaatgcaag agttgcaatc ccaactggat 1201 cgtttggctc gtgataaaat gctggcagaa tcacgagtca cagaattgtt gccgtatcaa 1261 aacgaagtaa ccaaactaaa aagtgattta gtgaaaatgc agagtgccca agagaagcat 1321 cagttggaaa tcaccaattt gaaatatgaa aatgagtcgt tgagaacccg tttgagagac 1381 gttgtcaact caccgctatc cgatgcggaa aagcaccaaa tcatacaaga ttcccagcgt 1441 ctacatagtt ctgcgccagc ctccattgca ctaccgacat cctcagacaa tgataatggt 1501 ggcacacctt gccttacgcc cgactgggat aagcattcct cttctagtga aatatctgta 1561 gcttgtctgc aagataagat catacaaatg gaagagaccc attactcgac caatgaagaa 1621 ttgcaagcca ctctccagga actatccgat ttgcaggctc aattgagtga tgcccaaacc 1681 gagaatgaac gtttagccga agaaaaggac gttctctttc agtcgttgtg tcggcaaact 1741 gaaaaactca acgattctcg cacccaaatc aataatctac aagaactttt gctaagagat 1801 gctaaacaaa acaccgccga agaggctgtt tcctcggaaa gggaaaagaa attaatggat 1861 ctaatcaaaa ctgcccaaga tgaacgtgaa gcggccttag tcaagcagga ggaactcaat 1921 gctgaactgc aagatttaag gcaaaccaat gaaagctata cggcagagca aacccgcctt 1981 agggaacgca ttgctctgct agagtcctcc atagatgcgg aacattctca gcgcaaacaa 2041 atggaactac aactgcaagc agccaaagag gaaatatcac atggtataat cgaaataaat 2101 cgattgacca ccctactaga gaatgccaaa tcaaaaattg aagaactcga acaggatctg 2161 gctcgaggcg ataaaaccga tcttagtgat cttttagatg cggcgcgcaa agaaaaagac 2221 ttattggaag aaaaagtagc cgaaatacaa gatcagtggt ctcgcagtca ggccgaggtt 2281 aggcgactca aggatcaaat tgccgattta actgaggaac tcaaagtttc caaaaacaat 2341 tcgaaatgtg ccctctccca tctcgaatac cggctggacc aagttcaaca ggagaaggat 2401 aagctttcag ccgaacacca acaactctgc gagagtacaa gtgaattaca agtgcaatgc 2461 aaatgtcatt tggaggacaa aaatcaactc cagtcactgc tgagtgaaac gcaaaaacat 2521 ttggctgacg tcgaacgtaa attaaacgac acccaacagc aactggaaga tttgcaacaa 2581 ttacgaaaac aagaagccga agaatggcaa caattccaat cggatctact gatgaccgtg 2641 cgggtagcca atgattttaa gactgaagcc cttagtgcta gagaacaatt agtattggat 2701 aataagacgc aaaaggagaa aatacgtatg ttggaacaac aaattgagaa attaaacaaa 2761 caacaacaac aacaaaccga gacacagcaa tcagtgtaca acacagtatc gactgtacaa 2821 caagaaatgg cctcgagacg cagcaaagta ggcagctttt caagacaaga ctcacgtttg 2881 tctgtcaaaa ctttaattga aagcatagaa aataataaac agaccgctaa agcagaggag 2941 ccagagtctc gctacagctc ttcatcaagt ttaaatagta gtagtactcc agaaataaca 3001 cccagtgcta taccgttagt cactaccaat acgaacaatc cagactggtc tgaaaatgtt 3061 tctagactta cacccttaat aggcagctta aatactgcaa caacggcagc agcacccaat 3121 aatattacaa caccaatggt accagcattg acaacagcaa caaccaaggg cccactaaga 3181 gaacagcaac aacaacaatc tgtagtatcc aatttacaca taagcagtct caacaatgtt 3241 tccaaatctc tgttaagtgg tgaacgcaaa gatcctttga acatgctggc taagaatggt 3301 ggttcaaagc gcaatgcttt gttgaaatgg tgtcaaaata aaactgtcgg ttatcgcaat 3361 atagaaatca caaatttcag ttcatcctgg aatgatggct tggcattttg tgcaatttta 3421 cattcctatt taccggatcg cattccttat gatactttaa gtccagccaa caaaagacgt 3481 aatttctcat tggcctttgc ggcagctgaa agcgttggta tacccacaac actgaacatc 3541 aatgatatgt gtcaaatcga acgtcccgat tggactcaaa taatgtctta tgttacagct 3601 atttataaat attttgaaac ttaagtgcat cgctttgcat tgcattgtat tgcatattta 3661 tgatttacaa ttttatttaa ttttttaacg gcatactata atttttaaca actgttggct 3721 catattttta ttgttaacga aatacaaatg ttatttttta ttatatatac ataaatacat 3781 aggcgcgagc tcctttcctt ttcctcatac acctcgaaac gttcgcgttg aatcttttaa 3841 taatttttga ttttatccat actttactcg taccaacaac cacccctctg aatgaagcca 3901 aattttttta tttttttttt tcatttcatt attatttttt ttattattta tttaattgtg 3961 cattcttctt ttaattacaa aatacaataa ttataataaa ttttcaatta agaatatgta 4021 aatattttgc aaaagatcca ttataagcta ctaaaataaa ctat