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LOCUS XM_013244227 5263 bp mRNA linear INV 02-SEP-2023 mRNA. ACCESSION XM_013244227 VERSION XM_013244227.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013244227.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5263 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..5263 /gene="LOC106081945" /note="sorting nexin-25; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106081945" CDS 591..3962 /gene="LOC106081945" /codon_start=1 /product="sorting nexin-25" /protein_id="XP_013099681.2" /db_xref="GeneID:106081945" /translation="MKDNERKCPKLNSHSKKMPAIDAIENFPHQRPLFPLDHTPHENG GSSSHGSSKNSSTSSSSKLRTWSALLRVIQLNWKIFLSALAVTLLAIIWYYPIFFLFI LFVLYSLLLVVAAVAGTVYIHYLFTTKEPPKPNREPLNVLYNATQNSLFDLPKPIKNA TNLPLIFGKTVDLQIQQIIEYVLRDFMTPWLGYVVTKPKLMNDIVREDLWNAIQKMHE RAKKMDAPKLIAVDMINRVTVHLEKIRISEARAAEMNVAPVFSTNSYLANEEKEMEFL RKLCEIMVILLLPRGYSLPPLKVLLSEILSYKIFFPMIKMLTSPDYINQKVVQNIEGR LAAAAISKRSYEYAASFEDFLKVINNCGNLEELSLIRKSIVNDLMHATTVQNLQRAKG IDPDNDPDHNLSKSEVSAAMRLKRYVAQLTYAKNMCEKNLEKFGWNGNYSSDLDLSLV EILNTAIGRRYFTIFLEPLKASALVGFYMAVEEMKHAPKNAAHQLGTEIFYTYIRVPK SEIQFDKHERKLIETFLLGDSGPEIFYDLQKQILKTLEEKYYPPFVLSEQYRLLKEAL DSDDYKDPTLIIGSLSDNHEDVAVALDGLEVGATGTIDVAAHTSYARKKLEQIQERID KKNQALDALKYSVKPDSKVLQILEKEMEWLKNVKRQTEAHLRRTDAWTEHLGRWKATL QSVEISDEKESLQFMILVHVDEDINTPPSLKHSSGRVEARPGSISSGWVVMRSLNQVH ELQRKLRHVSANLKSFDLPTNFKFFFLKNDKHALEKAKLQIQKFINLILEDDHLNGSE AIYTFLSPSSDHLKQSLPSPKKSKFSLSTLFKTETGKSSESSSKASDPFWGLQRDDED ISTYLEGVPTGDNKLMADLDSKDSIAEPLYALMGEIFDMGGVFKWLRKSLISFVQITY GRTINRQIRESVSYLFEESMLHYYFSAILKSFWPGGVLASAYPVRSDDMKEMTTNAAK ALLMDNIPEVLCNLVGAQAAKRGILKVFDALQNPVYNKQLFYELLEILMMEFFPEIKQ LKIHTPITSIQTSQHSSGVSGSGGGGGGGASSNSGTGITGSSANISVSTNKSQNNNQN DKYPLDKHNTHHSSDKHSNNHHHHHHHQHHLTTGK" polyA_site 5263 /gene="LOC106081945" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgtatacaa taatttcggc cgtcaaaggg atagaacgga aaaacggaaa taaaacaatt 61 aaaaaataat tactgtgaaa gttaataagt ttctgtgtgt gcgtatgcat tacttggctg 121 ttggagaaaa caaagctgac caatttccca caagtcagtg ggtgcgtgtg tgtttgtgct 181 acattttgta tacaaaaaga aattgtaaag aggaaaaata tccttgaggt tgttttgaaa 241 gaaattttca agaatttatc attggtagat tatttggttt tatgtaacaa cttgttgcct 301 gctatctgta ataaaaggac gataagttta tacgaaaaat aaatctcctt atgtgaacga 361 cgtaaatatt gattttcata ttgaatattg aatatacctg ctgtaaaacc acccccgccc 421 aacacatact cgtagtcaaa actaataaca cagcgcatag aatgtgggca tcgcgtataa 481 aaataaaatg tgaataacat cgttggtcat agccccaata gcagtagcag caacagcagc 541 gggggtgagg gtgcagtagc actattagcc caggaggaaa gcggcaactg atgaaggaca 601 acgaaaggaa gtgcccaaag cttaatagtc attctaagaa aatgcctgca attgatgcca 661 tagaaaactt tccacatcaa cgtcctcttt tccccttgga tcatacgccc cacgagaatg 721 gtggcagcag cagtcacggt agctccaaaa actcctccac ctcctcctcc tccaaactga 781 ggacatggtc ggcactgctg cgtgttatac aacttaattg gaaaatattt ttgtccgcct 841 tggcagtgac attgctggcc atcatatggt attatcccat attctttctg ttcatactgt 901 ttgttttgta ttcgctgctt ctggttgttg ccgctgtggc tgggacagtt tacattcatt 961 acttgtttac cacaaaggag ccgccaaagc caaaccgcga accactaaat gttctataca 1021 atgccacaca aaatagtctc tttgatctcc ccaaacccat taagaatgcc acaaatttac 1081 cattgatatt tggcaaaact gtggatttgc aaattcaaca aattattgaa tatgttttaa 1141 gagattttat gacgccatgg ctgggatatg tggtgaccaa acccaaactc atgaatgata 1201 ttgtccgcga ggacctatgg aatgccatac agaaaatgca tgaaagggcc aagaaaatgg 1261 atgcaccgaa gcttatagca gtcgatatga ttaacagagt tacagttcat ttggaaaaga 1321 tacgaatatc tgaagctagg gcagctgaaa tgaatgtagc tccagtattt tcaaccaatt 1381 cctatttggc caacgaagag aaggaaatgg agtttctaag aaaattgtgt gagattatgg 1441 ttatactgct gcttccacgc ggctattcat taccaccgct aaaagtgctg ttaagtgaaa 1501 ttctatccta caaaatattt tttcccatga tcaaaatgtt aacatcaccc gactatatca 1561 accagaaagt tgtacaaaac attgagggtc gtttggccgc agctgccatc agtaaacgca 1621 gctatgaata tgctgccagt tttgaggatt ttctcaaagt aatcaacaat tgtggcaatc 1681 ttgaggaatt gtctctaata cgaaaaagta ttgtcaacga tttgatgcat gcaaccacag 1741 tacaaaatct ccaacgtgcc aaaggtattg atcccgacaa tgatccggac cacaatctct 1801 ccaaatcgga agtatcggct gctatgcgtt tgaaacgtta tgtggcccag ttaacctatg 1861 ccaagaatat gtgcgaaaag aacttggaga aatttggttg gaatggtaac tattcgagtg 1921 atttggattt gtcgctagtg gaaatactca acacagccat aggaaggcgt tattttacca 1981 tatttttgga gccccttaaa gccagtgctt tggtgggctt ctacatggcc gttgaggaaa 2041 tgaaacatgc ccccaaaaat gcagcccatc aattgggcac cgaaatcttc tatacctaca 2101 tacgagtacc aaagtccgaa atacaatttg acaaacacga acgtaaacta atagaaacat 2161 tcctactggg cgattcggga ccagaaatat tctatgactt gcagaaacaa attctgaaaa 2221 ccctggaaga aaagtactat cccccttttg tattgagcga acaatatcgt ttgctaaagg 2281 aagccctaga ctccgatgac tacaaagatc ccaccttaat aataggctca ttaagtgata 2341 atcacgagga tgttgctgtc gctttagatg gtctggaagt tggtgcaacg ggcaccatcg 2401 atgtggcagc tcatacatca tatgcgcgta agaaactaga acaaatacag gaacgtatag 2461 ataagaaaaa tcaagctttg gatgctttaa aatattccgt taaacccgac tcaaaagtac 2521 tacaaatttt ggaaaaagaa atggaatggc tgaagaatgt gaagcgacaa actgaggcac 2581 atttacgtcg taccgatgca tggactgaac atttgggtcg ctggaaagcc acgctacaaa 2641 gtgtggagat ttccgatgaa aaggaatccc tacaatttat gattctagta catgtagacg 2701 aggacattaa tacaccgcct tcgctaaagc attcgtcagg aagagtcgaa gctagacccg 2761 gtagcatatc aagtggctgg gttgtaatga gatcattgaa ccaagttcat gaattacaaa 2821 gaaagctgag acatgttagt gccaatctaa agtcatttga cctgccaaca aattttaagt 2881 ttttcttttt gaaaaacgat aagcacgctt tggagaaggc taaactgcaa atacagaaat 2941 tcatcaatct catattagag gatgatcatc tcaatggaag tgaagccatt tacacttttc 3001 ttagtcccag ttcggatcat ttgaaacaat cgttaccttc tccgaaaaaa tccaaatttt 3061 ctctatccac gctgtttaaa acggaaacag gcaaatcatc agaatcttct tcgaaagcat 3121 cggatccttt ttggggttta caacgtgatg acgaagacat atctacatat ttggaaggtg 3181 ttcctaccgg tgataataaa ctaatggctg atttggatag caaagattcc atagcggaac 3241 ctttgtatgc gctaatggga gaaatattcg atatgggtgg cgtttttaaa tggctacgca 3301 aaagtctaat ttcatttgta caaataacat atggtcgaac tattaatagg caaattcgtg 3361 aatctgtatc atatttgttc gaggaatcta tgcttcacta ttacttttcg gccattttga 3421 aatcattttg gcctggtgga gttctagcat cggcatatcc cgtcagatca gacgatatga 3481 aggaaatgac aacaaatgcg gccaaggctc tacttatgga taatatacca gaggttttat 3541 gtaatttggt tggagcccaa gctgctaaac gtggtatact gaaagtattt gatgctctac 3601 aaaatcccgt ctataataag caattatttt atgaactttt ggaaatcctt atgatggaat 3661 tctttcccga aataaaacaa ttaaaaatcc atacacccat aacaagcata caaacatctc 3721 aacattcctc gggagttagt ggtagcggtg gtggtggtgg tggtggtgcc agcagcaaca 3781 gcggtaccgg cattactgga agcagtgcca acattagcgt ttcaacaaat aaatcacaaa 3841 ataataatca gaacgacaaa tatcctttgg ataaacacaa tacccaccat agcagtgata 3901 agcattcaaa caatcatcat catcaccatc atcatcagca tcatctcact acaggaaagt 3961 aaaacttata tagaatttcg taacgaaacc cacaacgtta ttaggtgcta aaattgtatt 4021 gtattatgtg tatcatatat atatatgaat atatatttaa tttaaaaaaa aatgtgtaaa 4081 acatgccatt tgtatatgtg ggcactattg aacctaactc gaattaacat ttcctttttt 4141 gcaaaatgtt ttaattttta attccatttt aatttcagac ttgatactaa atggggtttt 4201 tacatagatt tacatgaatg tgatgttgtt tctattgtta taattaatta ttattattaa 4261 tttattgtta taaaatctat ataattttga aatatattgt attatttcaa tgcaatcact 4321 aaaataagag tatgaaccaa aattattggt aacatgatat ttcagggtat accaagtcaa 4381 aagtagtggc aacaaaaacc aatgctgtta ctttgatatg ttggtttttt ttagactttt 4441 ctctttgact tggcctatta tggattcatg ttatcctagc aagcaattta aatattctga 4501 ttgaaaaatt taagaaaatg cagtattaaa aaccagcata aaagttacaa aattttagtt 4561 cagaaattta tataaaacat tccaaagatt tgtatagtat cacaataata ccatgactgt 4621 ttgatattga tttgaatttt aaagcttgtc actaatttct agtaataata cctattactt 4681 tgggtatatt tggacctgat gaaccataca ataaatagtt tttaatatac acattttatt 4741 taaactcctt tgactttatg acttataaaa aactagctga acactggggt gtttctctac 4801 tccctaaaaa gacatttcca actcaaaagt gtgatatact taaattgccc tcactagttg 4861 tcctcccaag gcagccggtt gtacgtacct tattgacccg ataaagtcct tcatcggcaa 4921 ggactgccgc ctcagtgttt aatacactgc tacaacaaca ataactagtt gtcctcccaa 4981 ggcagccggt tgtacgtacc tgattgaccc catgaagtcc ttcatcggca agtgctgccg 5041 ccttagtgta caacaaactg ctacaacaac aactagttgt gggtatttag aatacttatg 5101 cagaataagt tggaggtcac ttgagtagca accttggtta ctagccatgt cgtcggagac 5161 tttgggtcca ctgtctgaac tcagagatac accatagcgc attgtaagac atcgaaaacg 5221 aaaaaataat aaaaccaacg cataaaacaa aaaaaaaacg aaa