Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_013243361 2103 bp mRNA linear INV 02-SEP-2023 (LOC106081423), mRNA. ACCESSION XM_013243361 VERSION XM_013243361.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq; includes ab initio. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013243361.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 2% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..2103 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2103 /gene="LOC106081423" /note="peptidoglycan-recognition protein LF; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins" /db_xref="GeneID:106081423" CDS 491..1744 /gene="LOC106081423" /codon_start=1 /product="peptidoglycan-recognition protein LF" /protein_id="XP_013098815.2" /db_xref="GeneID:106081423" /translation="MTLLLRLNFVLLIVFHLICDAKAIVTEGNDKNPNCPSIKLKRQW GGKFSRVIKHRPVAVKYVVIHHTVTKECTNFLQCADILQNMQHHHLTTLDLNDIGYNF LIGNDGIVYEGTGWYIKGAFTHGYNENGIGIAFIGDFRKKLPSRKALRSAKRLLSCGT EIGVLDPNYELFGAMQLSATKSPGLMLYNEIQDWNHWSPHPPRRISRNEYSGTPEVLK MFKYLFVCLAFICAVRFAICDGYGQRSSKTPDCPRIKLKRQWGGKLSTDIDYRPVPVK YVIIHHTVTPECSTFLECAEILQNIQHYHINTLDYDDIGYNFLIGNDGLVYEGTGWYV TGAHTYGYNRNGTGIAFIGDFSAKKPPRKALDVAKQLLKCGVEKGVLDSHYELFAGSQ VISTQSPGLLLYNEIQEWDHWSPNP" polyA_site 2103 /gene="LOC106081423" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 attcttcggg acaatctctt gaagaacaag attcgcattc aagcgcaact ttttagcata 61 tctctcattg catcagccta tatgattccc taatttcaag gaaattcgat gaagagttct 121 gccatatcgc acccatccaa tttagacggt cccgggggga aaaacgacgt ccaacccgtc 181 gacaatgaag aaatggccat gtatgcaatc agtccagctg aatatgcgag ttattccctg 241 accagaaata ctttttcagg aaaatgacat ccatgaaaga actcccctgg tatattgtca 301 ttcgctcagc atatagcatg tgcgtagata ccattataaa tttaaaaaac catatcctcc 361 aatgtgccat ttattctgca ttcattcacc acagctataa aaaatcatta taaaaagtca 421 ctacagacac ttcgaacttt attttaattc gcaattgcaa tcagcgcggt gactgtcggt 481 ctccatttca atgacacttt tacttcgctt gaactttgtt ctacttattg tgtttcatct 541 gatctgtgat gctaaggcaa tagtgacaga gggcaatgac aaaaatccaa attgtccatc 601 tataaaattg aaacgacagt ggggtggaaa attcagccgc gttataaaac atcgtcctgt 661 ggccgtcaaa tatgtcgtga ttcatcacac ggtgaccaaa gagtgtacca atttcttgca 721 gtgcgcagac attttacaaa acatgcaaca ccaccattta acgacattag atctcaacga 781 tatcggctac aactttctga taggcaatga tggcattgta tatgaaggca ctggctggta 841 cattaaaggc gcttttacac atggctataa tgaaaatggt atcggtatag ctttcatagg 901 cgattttaga aaaaaattgc cttctcgaaa agctttgaga tctgccaaaa ggctgttgag 961 ctgtggtacg gaaattggtg tcctggatcc gaattacgaa ttatttggag caatgcagct 1021 atctgccact aaaagtcctg gtttgatgtt gtataatgaa attcaggatt ggaatcactg 1081 gtctcctcat cctcctcgga gaatatcaag aaatgaatat tccgggacac ctgaagtatt 1141 aaaaatgttt aaatatttat ttgtttgttt ggcttttatt tgcgctgttc gttttgcaat 1201 ttgcgatggc tatggccaaa gaagttcgaa gacccccgat tgcccgcgta taaaacttaa 1261 acgtcaatgg ggtggaaagt taagtacaga tattgattat cgtccagttc ctgtcaaata 1321 tgtaattatt catcatacgg tgacgcctga gtgttctacc tttttagagt gtgctgagat 1381 tttacaaaat attcagcatt accatatcaa cacattggat tatgatgaca ttggctacaa 1441 ctttcttatc ggcaatgatg gacttgttta cgagggcact ggatggtatg tgacgggtgc 1501 gcatacatat ggttacaatc gcaatggcac tggtatagct ttcataggag actttagtgc 1561 caaaaaaccc ccacggaaag cattggatgt ggctaaacag cttttgaaat gtggcgttga 1621 aaagggagtt ctggattcac attacgaatt attcgctggt tctcaagtca tctcaacaca 1681 gagccccggg ttgctattgt acaacgaaat acaagaatgg gatcattggt ccccgaatcc 1741 ttagatgtag catgctgttt tgaaattcta cgactattgc cttattcctc gacctttaaa 1801 attatttttt agtttatgtt ttgttattaa attttcgaga tgtgaatgct agtttaagta 1861 aaatgtaact ttagagtatt ctcgtgttag gctaagaaaa attttttatc aaatccacaa 1921 aaaacaacaa gttctgatcc aaacacaaag ttacataaat atttttgcct gggcgtagcc 1981 gtgatttttc tagtttaagc ccagtactga cttcattcgc atcgaaatgc ctattaaatt 2041 cttgccataa gacaaagaaa agtcacacaa taaaacaaac agaggcaacg gcattgaagc 2101 aga