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LOCUS XM_013243355 6967 bp mRNA linear INV 02-SEP-2023 (LOC106081420), transcript variant X4, mRNA. ACCESSION XM_013243355 VERSION XM_013243355.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013243355.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6967 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6967 /gene="LOC106081420" /note="uncharacterized LOC106081420; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106081420" CDS 1111..6747 /gene="LOC106081420" /codon_start=1 /product="uncharacterized protein LOC106081420 isoform X3" /protein_id="XP_013098809.2" /db_xref="GeneID:106081420" /translation="MASPMSPTNIYRQNMDNPQHGSHVVSNHNGYIQQSPVRYYHTGT VQNTNERSKLIEMLRTPNILTSPTIEPSSKGLLNGPGQNNCFLNCAVQVLWHLDAFRR SFRSLNQHVCSGQDCIFCALKELFQQLQTSSEPALCPEPLRRALASGPLAGRRFPLGC LGDAAECFELLLHRVHSHISSDDGDACESQACIAHRRFAMRVIEQSVCKCGANSEQLP FTQMVHYVSASALTSQNSLALQNHQQLTFGQLLRAAGNMGDIRDCPSSCGAKIGICRA LLNRPDVVSIGIVWDSERPAADQVHSVLKAVGTSLRLSDVFHQVSEQRWAQTVQHELV GIVSYYGKHYTTFFFHTKLKVWVYFDDANVKEVGPHWEGVVDKCSRGRYQPLLLLYAV PQPQQQSSANCPTQVSTSQYMHDTQSPAVRRAITPSPEKPQMGNTRRAITPTPLRMPN DYQNLSVIQKNIFPSGGGQHQQPPQVSEKHGAHLNTDETDSYISRKTVEHVLNAQYQN LSIIQDKIFPQDEKDVAVLNNYQQRKSLEAVLNAQLARKHQQHLQLQRSHSAESGHVS GSSASSTTSSTNSSSPPSDGLTIPEHLNQPRRRDSGNWSGDRNSASSASSTTLDNPYL YMVGKRSGAAVPQSPTRNGLPYDPGYDSFSLSSTDSYPPKHPLNPQLAKIPESSPSVV LTGDCEKLCHEADQLLEKSRILEEALDLETALVLCNAAAGRARAAMDAPYSNPHTMTF ARMKHNTCVMRARSLHRRILLEKGAEMDAMPEMKHMREGSTSSVIKHVRQNSKDKTLD GNNGGNNSSPTANNPNKSIEIYATLPKKKSPLKALVSASLASNDTDNIEFEATQVTPK PERESRSLFGRSSNKQQEKDKRSRSEDRNKISREFSLTETLLVNAKDTLKKHKEDKDE KKEKDKNGKKQHKIRRKLLMGGLIRRKNRSMPDLTEAGDETSNAQQAVANPPPLTSSV DDSVVGLQHANSMSGYISEGHFDFRDSTGTSSNGVNANPNLERSKLMRKSFHGSGRQL TVVAKVQPPPPPMRTSSTLTQQQLQQQLALQQQQDAALMQHFHHEATLSNISAMSSNT SISEDSCQTIITTCAQVHSEQSPLAKEQMYQQAYKASTEQGTDEVDGIPANANHQHAR QDSQEFPPPPPPLELPPYPSPPHSVSHSRQASEDFPPPPPEIDMEPLNQQINQIQALE AANKQQQHQRNMESMEGTTSILAQLQQRQHLMKMRKEHGNTPTFMQGNQNENSWLREL QLKQLQRQPDLTNVQSIAQRYEQHQQNHQSPSPMRAFGSQELLNVKSQPLRNGGHQRP DSDEVDCLPQRPPLPPQALQQRQQLQQQLQAKQMSSILPKPKYDISQTQIAEEIREVE LLNNMVQQTLNNNPSQPAATNNNAAPKRVKKKSVSFCDQVILVATADNEEDDDFIPNP ILERVLRTAQSPNDKVTAQMIQQQQQNIMRLQTEAPSRAVQSQQQLGLTAQMQQQQQH QQLGPHSPLTQNQQQQQMAQPSPLLGTERRNVGLSGPQEMQRYVQLQRPQLEALRLQQ QQIQQQHQQQMQQQHHQQMQLQQMQQKPQLQAGQVYTPIQDIYRMQQQQQQQQQQQQQ LTASNTLSSHLNETSAQNSLQSRTSMSGIANVAASQHMQMLATHTTQNQLQQQQQQQQ HHLPQNYSLPRLGNAQAPTNYYPGIAGLEQPPPSQQHIPSPYQRVPLPHGYPGLAEPA TLLNRPPHLINPQNPSNVHPGSPYMSIPSNSQIAQNQPVKAKKVSFEPGTKGDASEAT PNSSTLPPKTMLQQHGLPLPAQQAAASNGLPPPATSDGSNVNVTAIPTRVYNNAIVKA SAKASECNLCRKRHVIAPQQYCTNCEYYLKMLNNRR" polyA_site 6967 /gene="LOC106081420" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtatatgtaa aaataaaaca gataataaaa aaataataac gagccctttg gttttgtgca 61 aacatcatca aaaagtagat aacaaagcaa taattgtaaa caaccagaaa atttgtaact 121 aaattacaat tttatggtcc gagctagcga aaaaaatgtt catgttcgcg ttttgaaaca 181 acaacaagag agagaaaccg tgtgaaaatt gtcgggtttc ttttgctcga atacggaatc 241 gcaaagtatt caagagttgg tatacgaacg tgtgagtaca caatttgtac tttattcgag 301 gttatattaa attcaaccaa aaaaaattaa aatataaaca aaacaaagaa aatttcgcaa 361 cattggaaac agtggcaaca acataataaa gcatatgaat ttggtaaaca cggaagtaac 421 aagttcatca tataccaagt cagcatttgg aaattcccaa tttatggagt aaaattatca 481 taaagagaac gaaatagtgt tttatgtatt ttcatgttgc gaaacgagat caaaaattga 541 tgaatcaatc aacgtgtaca atcacaatag aaaatccaat ggtaaaaatc atgcagcaaa 601 aatgtcatca caaaaatcaa tgtaaataaa aatacgaata atttttccaa ataaaattat 661 atataaatcg caaaaatttt acaaaaatct gtaagatttt aagaagagca aagcaacaaa 721 aataatctga taagaaaaaa ttataataat agcaatttca aaacgaaaac aattttcaat 781 tttgtatgtg aatcatttgt tgattcgtcc agtttgaatg accataaatt aacctgtaac 841 atcctgtgtc agacattacc tcactacaaa caaccacaat caccaaccct aataacactg 901 aaagcaatca tcatcgcttc ctgcaaaatt caccccttgc ttgacatttg tggttttaac 961 tgccattggc gtcattactg ccaaaaggat tattaatttt gcctgctgta tttcttgtac 1021 tcattcaaag cgagttaaaa tatgtctgtc ataaagtaaa ctgttgcact tccaaccatt 1081 ttgaacacat tttgatttag taagaccaaa atggcttcac caatgtcgcc caccaatata 1141 tatcgacaaa acatggataa tcctcagcat ggatcacatg ttgtctcaaa ccacaatggt 1201 tatatacaac aatcgccagt cagatattat cacacgggaa ctgtgcagaa tacaaatgaa 1261 cgctccaaac ttattgaaat gctgagaaca ccgaatattt tgacatcacc caccattgaa 1321 ccatcatcaa aaggcctact aaatggacca ggtcaaaaca attgttttct caattgtgct 1381 gttcaggtcc tgtggcattt agatgctttt cgacgatcat ttcgttcttt gaatcaacat 1441 gtatgcagtg gccaagactg cattttctgt gctctaaagg aactgtttca acaattacaa 1501 actagctcgg agccggcctt atgccctgaa cccttgcgtc gtgccttagc ctctggtccc 1561 ttggctgggc gccgctttcc tttgggatgt ttaggcgatg ctgccgaatg ttttgagctg 1621 ctattgcatc gtgtacactc tcatatctcc tcggatgatg gtgatgcctg cgaatcacag 1681 gcctgtattg cccataggcg ttttgctatg cgtgttatag agcaaagtgt ttgcaaatgt 1741 ggtgccaatt cagagcagtt gccatttaca cagatggtcc attatgtgtc ggcttcggca 1801 ttgacttcac aaaattcatt ggctttgcag aatcatcagc agttgacttt tggccaactg 1861 ttaagggcag caggaaatat gggtgacata cgcgattgtc cgagttcctg tggtgccaaa 1921 attggcattt gtcgtgcctt gctgaaccgc cccgacgtag tgtccattgg cattgtttgg 1981 gactcggaaa ggcctgctgc cgatcaggtt cattcggttt tgaaagccgt aggcaccagc 2041 cttcgtttgt ccgatgtctt ccatcaggtc agcgagcaaa gatgggctca aacggtacag 2101 cacgagctag tgggcattgt ttcatattat ggcaagcatt acaccacctt cttcttccat 2161 accaaactca aggtttgggt ttatttcgat gatgccaatg ttaaagaggt tggcccccat 2221 tgggaaggtg ttgtggataa atgcagtcgt gggcgctatc aaccgttact gctactctat 2281 gccgtacccc agccccaaca acaatcttcg gcaaattgtc ctactcaagt gtctacgagc 2341 cagtacatgc atgacactca atcgccagca gtgcgccgag ctataactcc cagtcccgag 2401 aaaccgcaaa tgggcaatac tagacgtgcc attaccccca cgccattgcg catgcccaat 2461 gactaccaaa acttgagtgt tatacaaaag aatatctttc cctcgggggg aggccaacat 2521 cagcagccac ctcaagtatc ggaaaaacat ggagcccact tgaatacaga cgagaccgac 2581 tcctatatca gccgcaaaac agtggagcat gtcctcaatg cccaatatca gaatttgagt 2641 attattcagg ataaaatatt tccacaagat gagaaggatg ttgccgtgct gaataactac 2701 cagcaacgta aatcattgga ggcggtattg aatgctcagt tggcacgtaa acatcaacaa 2761 catttgcagc tgcaaagatc gcatagtgcc gagtcgggtc atgtttctgg ctcgtctgcc 2821 tcctcgacca catcttccac taacagctca tcgcctccca gtgatggttt gaccataccc 2881 gaacacttaa atcagccacg acgtcgtgat tcgggtaatt ggtctggaga tcgcaattcc 2941 gcaagttctg cttcttcaac cactttggac aatccctatc tgtatatggt gggcaaacgt 3001 tcgggggctg ctgttccgca aagtcccaca cgcaatggtt tgccttatga tccaggctac 3061 gactctttct cgctgagctc caccgactcg tatccaccta aacatccttt gaatccccaa 3121 ctggccaaaa taccagagtc atctccctcg gttgtactca ctggagactg tgaaaagtta 3181 tgtcacgaag ccgatcaatt gctggagaaa tcacgtatcc tagaagaggc gcttgacttg 3241 gaaacagcac tggtcctttg caatgccgct gccggtaggg ctcgagcagc catggatgct 3301 ccttacagca atcctcatac catgactttt gctcgcatga agcacaatac ctgtgtgatg 3361 agggctcgtt ccttgcatag acgcattttg ctggagaagg gagcggaaat ggatgccatg 3421 cctgaaatga agcacatgcg tgagggcagc accagcagtg tcattaagca cgtgcgccaa 3481 aatagcaaag acaagactct agatggcaat aatggtggca acaacagttc tcctactgcc 3541 aacaatccca acaaatccat agaaatatat gcgactttgc ccaaaaagaa gagtcccttg 3601 aaggctttgg tctcggcttc cttagcctcc aatgataccg ataatattga gtttgaagca 3661 acacaggtta ctcctaagcc cgagagggaa agtcgctctt tattcgggcg tagcagcaat 3721 aagcaacagg agaaggacaa gcgaagtcgc agtgaagatc gcaataagat cagccgggag 3781 ttttctctta ctgaaacctt gctggtcaat gctaaagaca ctttgaagaa acacaaggag 3841 gataaggatg agaaaaagga gaaggacaaa aatggcaaga agcagcataa gatacgacgc 3901 aagttgttaa tgggtggttt gatacgacgc aagaaccgtt ccatgcccga cttgacggag 3961 gctggagatg agactagtaa tgctcaacag gccgtcgcca atccacctcc cctaaccagt 4021 tctgtggatg actcagtggt cggtttgcaa catgccaact ccatgagtgg atacatatcg 4081 gagggtcact ttgacttccg cgatagcaca gggacctcct cgaatggggt caatgccaat 4141 cccaatttgg aacgcagcaa gctaatgcgt aaaagtttcc atggaagcgg acgtcaattg 4201 acagtggtgg cgaaagtaca gcctccacca ccacccatgc gtacatcctc gaccttaacg 4261 cagcagcagt tgcaacaaca gcttgctttg cagcaacagc aagatgccgc cttaatgcaa 4321 cacttccatc acgaggcgac tctctccaat atatcggcca tgagttcgaa tacctcaata 4381 agtgaggatt cgtgtcagac catcattacc acctgcgctc aagttcactc cgaacaaagc 4441 cctttggcca aggaacaaat gtatcaacaa gcctataagg cttcgaccga gcagggcaca 4501 gatgaagttg atggcattcc cgccaacgcg aatcatcaac atgcgcgtca agattcacaa 4561 gaattccccc cacccccgcc tccattggaa ctaccaccgt atcctagtcc accgcacagt 4621 gtgagccatt ccaggcaagc cagtgaagat tttccaccac cacctcctga aatcgatatg 4681 gagccgttga atcaacaaat caatcaaatc caagccctag aagcggccaa caagcaacaa 4741 cagcaccaga gaaatatgga gtccatggag ggtaccacca gcattttggc tcagctgcag 4801 caacggcaac atttaatgaa aatgcgcaaa gaacatggca atactcccac ttttatgcag 4861 ggcaaccaga atgagaactc ttggttaagg gaattgcaat tgaagcaatt acagcgccaa 4921 cctgatttaa ccaacgttca atcgattgct caacgctatg agcaacatca gcaaaatcac 4981 caatcaccca gtcccatgag ggcttttggg tcccaagaat tgctgaatgt aaagtcgcag 5041 ccattgcgta atggtggaca ccaaagacct gatagtgatg aggtggattg tctgccgcaa 5101 aggcctcctc tgccaccaca agctctacaa cagaggcaac aactacagca gcaactccaa 5161 gcaaaacaga tgtcctccat attacctaag cccaaatatg atatatccca aacacaaatc 5221 gccgaggaaa tccgggaagt ggagcttctt aacaacatgg tgcaacagac gctaaataac 5281 aatccctccc aaccagctgc cactaacaac aacgccgctc ccaaacgggt aaagaagaag 5341 agtgtatcgt tctgtgatca agtgatactg gtggcaaccg ccgacaatga ggaagatgat 5401 gattttatac ccaatcccat tttggaaaga gtcctaagga ccgctcagag tcccaatgac 5461 aaagtgacgg cacagatgat acaacagcaa caacaaaata tcatgaggct acagacggag 5521 gcacccagcc gcgcagtaca atcgcaacag cagttgggtt tgaccgcaca aatgcagcaa 5581 cagcagcagc atcaacaact agggccacat tcaccgctta cacaaaatca gcaacaacag 5641 caaatggctc aaccatcgcc cttgttagga acggagagaa gaaatgttgg cctttcgggt 5701 ccacaggaaa tgcaacgtta tgtgcagttg caaagacctc aattggaggc tttgcgcctg 5761 cagcaacaac aaatccagca gcagcatcaa caacagatgc aacagcagca tcatcagcaa 5821 atgcagctac aacaaatgca gcaaaagcct caactgcagg caggccaagt ttacacaccc 5881 atccaggata tttatcgcat gcaacagcag caacaacaac aacaacagca acagcagcag 5941 ttaactgcaa gcaatacttt atcctcgcat ctcaatgaaa catccgccca aaattccctg 6001 caatcacgca ccagtatgag cggcatcgct aatgttgccg cgtcgcaaca tatgcagatg 6061 ttggcaacgc atacaacaca aaatcaactt cagcagcaac aacaacaaca acaacatcac 6121 ctgccccaaa actattcact gcccagattg ggcaatgccc aagcacccac taattattat 6181 cctggcattg caggtctaga acagcctccg ccaagccaac aacacatacc ctcgccctat 6241 caaagagtac ccctacccca tggctatcct ggccttgctg agcctgcgac actcttaaat 6301 cgtcccccac atctaattaa tccccaaaac ccatccaacg tccatcctgg aagtccctac 6361 atgtccatac cttccaactc gcaaatagca caaaatcagc cggtcaaagc gaagaaggtg 6421 agctttgaac ctggcaccaa aggagacgcc agcgaagcca cacccaattc aagcacgctt 6481 ccgcccaaga ccatgttgca acaacatggt ttacccctac ccgcccaaca agctgcagca 6541 tccaacggtc tgccaccacc agccaccagc gatggcagca atgtgaacgt aactgccata 6601 cccactcgtg tctacaacaa tgccatcgta aaagcttcag ccaaagcttc ggagtgcaat 6661 ttgtgtcgca agcgtcatgt catagccccc caacagtact gtaccaactg cgagtactac 6721 ttgaagatgt tgaacaatcg gagatagaaa ccagagaaca caaaagctgc agtttgataa 6781 caaaaaaaga aagttcaaac tctcgaagta atggttaacg gaggcattgc tttgcatttt 6841 tcatgtaaac gaaagcattt catatatgtt attgaaaatc gtccttttag tccttaagct 6901 caccaataag ttgtagtttt taatgctagt tctttaggtg ttttgaaaag aatctcatat 6961 gatgcta