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LOCUS XM_013243354 7022 bp mRNA linear INV 02-SEP-2023 (LOC106081420), transcript variant X3, mRNA. ACCESSION XM_013243354 VERSION XM_013243354.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013243354.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7022 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..7022 /gene="LOC106081420" /note="uncharacterized LOC106081420; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106081420" CDS 1166..6802 /gene="LOC106081420" /codon_start=1 /product="uncharacterized protein LOC106081420 isoform X3" /protein_id="XP_013098808.2" /db_xref="GeneID:106081420" /translation="MASPMSPTNIYRQNMDNPQHGSHVVSNHNGYIQQSPVRYYHTGT VQNTNERSKLIEMLRTPNILTSPTIEPSSKGLLNGPGQNNCFLNCAVQVLWHLDAFRR SFRSLNQHVCSGQDCIFCALKELFQQLQTSSEPALCPEPLRRALASGPLAGRRFPLGC LGDAAECFELLLHRVHSHISSDDGDACESQACIAHRRFAMRVIEQSVCKCGANSEQLP FTQMVHYVSASALTSQNSLALQNHQQLTFGQLLRAAGNMGDIRDCPSSCGAKIGICRA LLNRPDVVSIGIVWDSERPAADQVHSVLKAVGTSLRLSDVFHQVSEQRWAQTVQHELV GIVSYYGKHYTTFFFHTKLKVWVYFDDANVKEVGPHWEGVVDKCSRGRYQPLLLLYAV PQPQQQSSANCPTQVSTSQYMHDTQSPAVRRAITPSPEKPQMGNTRRAITPTPLRMPN DYQNLSVIQKNIFPSGGGQHQQPPQVSEKHGAHLNTDETDSYISRKTVEHVLNAQYQN LSIIQDKIFPQDEKDVAVLNNYQQRKSLEAVLNAQLARKHQQHLQLQRSHSAESGHVS GSSASSTTSSTNSSSPPSDGLTIPEHLNQPRRRDSGNWSGDRNSASSASSTTLDNPYL YMVGKRSGAAVPQSPTRNGLPYDPGYDSFSLSSTDSYPPKHPLNPQLAKIPESSPSVV LTGDCEKLCHEADQLLEKSRILEEALDLETALVLCNAAAGRARAAMDAPYSNPHTMTF ARMKHNTCVMRARSLHRRILLEKGAEMDAMPEMKHMREGSTSSVIKHVRQNSKDKTLD GNNGGNNSSPTANNPNKSIEIYATLPKKKSPLKALVSASLASNDTDNIEFEATQVTPK PERESRSLFGRSSNKQQEKDKRSRSEDRNKISREFSLTETLLVNAKDTLKKHKEDKDE KKEKDKNGKKQHKIRRKLLMGGLIRRKNRSMPDLTEAGDETSNAQQAVANPPPLTSSV DDSVVGLQHANSMSGYISEGHFDFRDSTGTSSNGVNANPNLERSKLMRKSFHGSGRQL TVVAKVQPPPPPMRTSSTLTQQQLQQQLALQQQQDAALMQHFHHEATLSNISAMSSNT SISEDSCQTIITTCAQVHSEQSPLAKEQMYQQAYKASTEQGTDEVDGIPANANHQHAR QDSQEFPPPPPPLELPPYPSPPHSVSHSRQASEDFPPPPPEIDMEPLNQQINQIQALE AANKQQQHQRNMESMEGTTSILAQLQQRQHLMKMRKEHGNTPTFMQGNQNENSWLREL QLKQLQRQPDLTNVQSIAQRYEQHQQNHQSPSPMRAFGSQELLNVKSQPLRNGGHQRP DSDEVDCLPQRPPLPPQALQQRQQLQQQLQAKQMSSILPKPKYDISQTQIAEEIREVE LLNNMVQQTLNNNPSQPAATNNNAAPKRVKKKSVSFCDQVILVATADNEEDDDFIPNP ILERVLRTAQSPNDKVTAQMIQQQQQNIMRLQTEAPSRAVQSQQQLGLTAQMQQQQQH QQLGPHSPLTQNQQQQQMAQPSPLLGTERRNVGLSGPQEMQRYVQLQRPQLEALRLQQ QQIQQQHQQQMQQQHHQQMQLQQMQQKPQLQAGQVYTPIQDIYRMQQQQQQQQQQQQQ LTASNTLSSHLNETSAQNSLQSRTSMSGIANVAASQHMQMLATHTTQNQLQQQQQQQQ HHLPQNYSLPRLGNAQAPTNYYPGIAGLEQPPPSQQHIPSPYQRVPLPHGYPGLAEPA TLLNRPPHLINPQNPSNVHPGSPYMSIPSNSQIAQNQPVKAKKVSFEPGTKGDASEAT PNSSTLPPKTMLQQHGLPLPAQQAAASNGLPPPATSDGSNVNVTAIPTRVYNNAIVKA SAKASECNLCRKRHVIAPQQYCTNCEYYLKMLNNRR" polyA_site 7022 /gene="LOC106081420" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gtatatgtaa aaataaaaca gataataaaa aaataataac gagccctttg gttttgtgca 61 aacatcatca aaaagtagat aacaaagcaa taattgtaaa caaccagaaa atttgtaact 121 aaattacaat tttatggtcc gagctagcga aaaaaatgtt catgttcgcg ttttgaaaca 181 acaacaagag agagaaaccg tgtgaaaatt gtcgggtttc ttttgctcga atacggaatc 241 gcaaagtatt caagagttgg tatacgaacg tgtgagtaca caatttgtac tttattcgag 301 gttatattaa attcaaccaa aaaaaattaa aatataaaca aaacaaagaa aatttcgcaa 361 cattggaaac agtggcaaca acataataaa gcatatgaat ttggtaaaca cggaagtaac 421 aagttcatca tataccaagt cagcatttgg aaattcccaa tttatggagt aaaattatca 481 taaagagaac gaaatagtgt tttatgtatt ttcatgttgc gaaacgagat caaaaattga 541 tgaatcaatc aacgtgtaca atcacaatag aaaatccaat ggtaaaaatc atgcagcaaa 601 aatgtcatca caaaaatcaa tgtaaataaa aatacgaata atttttccaa ataaaattat 661 atataaatcg caaaaatttt acaaaaatct gtaagatttt aagaagagca aagcaacaaa 721 aataatctga taagaaaaaa ttataataat agcaatttca aaacgaaaac aattttcaat 781 tttgtatgtg aatcatttgt tgattcgtcc agtttgaatg accataaatt aacctgtaac 841 atcctgtgtc agacattacc tcactacaaa caaccacaat caccaaccct aataacactg 901 aaagcaatca tcatcgcttc ctgcaaaatt caccccttgc ttgacatttg tggttttaac 961 tgccattggc gtcattactg ccaaaaggat tattaatttt gcctgctgta tttcttgtac 1021 tcattcaaag cgagttaaag taagcgtgcg gttctaataa tcctccttga aaagaaaaca 1081 gtttttcatc tacgatatgt ctgtcataaa gtaaactgtt gcacttccaa ccattttgaa 1141 cacattttga tttagtaaga ccaaaatggc ttcaccaatg tcgcccacca atatatatcg 1201 acaaaacatg gataatcctc agcatggatc acatgttgtc tcaaaccaca atggttatat 1261 acaacaatcg ccagtcagat attatcacac gggaactgtg cagaatacaa atgaacgctc 1321 caaacttatt gaaatgctga gaacaccgaa tattttgaca tcacccacca ttgaaccatc 1381 atcaaaaggc ctactaaatg gaccaggtca aaacaattgt tttctcaatt gtgctgttca 1441 ggtcctgtgg catttagatg cttttcgacg atcatttcgt tctttgaatc aacatgtatg 1501 cagtggccaa gactgcattt tctgtgctct aaaggaactg tttcaacaat tacaaactag 1561 ctcggagccg gccttatgcc ctgaaccctt gcgtcgtgcc ttagcctctg gtcccttggc 1621 tgggcgccgc tttcctttgg gatgtttagg cgatgctgcc gaatgttttg agctgctatt 1681 gcatcgtgta cactctcata tctcctcgga tgatggtgat gcctgcgaat cacaggcctg 1741 tattgcccat aggcgttttg ctatgcgtgt tatagagcaa agtgtttgca aatgtggtgc 1801 caattcagag cagttgccat ttacacagat ggtccattat gtgtcggctt cggcattgac 1861 ttcacaaaat tcattggctt tgcagaatca tcagcagttg acttttggcc aactgttaag 1921 ggcagcagga aatatgggtg acatacgcga ttgtccgagt tcctgtggtg ccaaaattgg 1981 catttgtcgt gccttgctga accgccccga cgtagtgtcc attggcattg tttgggactc 2041 ggaaaggcct gctgccgatc aggttcattc ggttttgaaa gccgtaggca ccagccttcg 2101 tttgtccgat gtcttccatc aggtcagcga gcaaagatgg gctcaaacgg tacagcacga 2161 gctagtgggc attgtttcat attatggcaa gcattacacc accttcttct tccataccaa 2221 actcaaggtt tgggtttatt tcgatgatgc caatgttaaa gaggttggcc cccattggga 2281 aggtgttgtg gataaatgca gtcgtgggcg ctatcaaccg ttactgctac tctatgccgt 2341 accccagccc caacaacaat cttcggcaaa ttgtcctact caagtgtcta cgagccagta 2401 catgcatgac actcaatcgc cagcagtgcg ccgagctata actcccagtc ccgagaaacc 2461 gcaaatgggc aatactagac gtgccattac ccccacgcca ttgcgcatgc ccaatgacta 2521 ccaaaacttg agtgttatac aaaagaatat ctttccctcg gggggaggcc aacatcagca 2581 gccacctcaa gtatcggaaa aacatggagc ccacttgaat acagacgaga ccgactccta 2641 tatcagccgc aaaacagtgg agcatgtcct caatgcccaa tatcagaatt tgagtattat 2701 tcaggataaa atatttccac aagatgagaa ggatgttgcc gtgctgaata actaccagca 2761 acgtaaatca ttggaggcgg tattgaatgc tcagttggca cgtaaacatc aacaacattt 2821 gcagctgcaa agatcgcata gtgccgagtc gggtcatgtt tctggctcgt ctgcctcctc 2881 gaccacatct tccactaaca gctcatcgcc tcccagtgat ggtttgacca tacccgaaca 2941 cttaaatcag ccacgacgtc gtgattcggg taattggtct ggagatcgca attccgcaag 3001 ttctgcttct tcaaccactt tggacaatcc ctatctgtat atggtgggca aacgttcggg 3061 ggctgctgtt ccgcaaagtc ccacacgcaa tggtttgcct tatgatccag gctacgactc 3121 tttctcgctg agctccaccg actcgtatcc acctaaacat cctttgaatc cccaactggc 3181 caaaatacca gagtcatctc cctcggttgt actcactgga gactgtgaaa agttatgtca 3241 cgaagccgat caattgctgg agaaatcacg tatcctagaa gaggcgcttg acttggaaac 3301 agcactggtc ctttgcaatg ccgctgccgg tagggctcga gcagccatgg atgctcctta 3361 cagcaatcct cataccatga cttttgctcg catgaagcac aatacctgtg tgatgagggc 3421 tcgttccttg catagacgca ttttgctgga gaagggagcg gaaatggatg ccatgcctga 3481 aatgaagcac atgcgtgagg gcagcaccag cagtgtcatt aagcacgtgc gccaaaatag 3541 caaagacaag actctagatg gcaataatgg tggcaacaac agttctccta ctgccaacaa 3601 tcccaacaaa tccatagaaa tatatgcgac tttgcccaaa aagaagagtc ccttgaaggc 3661 tttggtctcg gcttccttag cctccaatga taccgataat attgagtttg aagcaacaca 3721 ggttactcct aagcccgaga gggaaagtcg ctctttattc gggcgtagca gcaataagca 3781 acaggagaag gacaagcgaa gtcgcagtga agatcgcaat aagatcagcc gggagttttc 3841 tcttactgaa accttgctgg tcaatgctaa agacactttg aagaaacaca aggaggataa 3901 ggatgagaaa aaggagaagg acaaaaatgg caagaagcag cataagatac gacgcaagtt 3961 gttaatgggt ggtttgatac gacgcaagaa ccgttccatg cccgacttga cggaggctgg 4021 agatgagact agtaatgctc aacaggccgt cgccaatcca cctcccctaa ccagttctgt 4081 ggatgactca gtggtcggtt tgcaacatgc caactccatg agtggataca tatcggaggg 4141 tcactttgac ttccgcgata gcacagggac ctcctcgaat ggggtcaatg ccaatcccaa 4201 tttggaacgc agcaagctaa tgcgtaaaag tttccatgga agcggacgtc aattgacagt 4261 ggtggcgaaa gtacagcctc caccaccacc catgcgtaca tcctcgacct taacgcagca 4321 gcagttgcaa caacagcttg ctttgcagca acagcaagat gccgccttaa tgcaacactt 4381 ccatcacgag gcgactctct ccaatatatc ggccatgagt tcgaatacct caataagtga 4441 ggattcgtgt cagaccatca ttaccacctg cgctcaagtt cactccgaac aaagcccttt 4501 ggccaaggaa caaatgtatc aacaagccta taaggcttcg accgagcagg gcacagatga 4561 agttgatggc attcccgcca acgcgaatca tcaacatgcg cgtcaagatt cacaagaatt 4621 ccccccaccc ccgcctccat tggaactacc accgtatcct agtccaccgc acagtgtgag 4681 ccattccagg caagccagtg aagattttcc accaccacct cctgaaatcg atatggagcc 4741 gttgaatcaa caaatcaatc aaatccaagc cctagaagcg gccaacaagc aacaacagca 4801 ccagagaaat atggagtcca tggagggtac caccagcatt ttggctcagc tgcagcaacg 4861 gcaacattta atgaaaatgc gcaaagaaca tggcaatact cccactttta tgcagggcaa 4921 ccagaatgag aactcttggt taagggaatt gcaattgaag caattacagc gccaacctga 4981 tttaaccaac gttcaatcga ttgctcaacg ctatgagcaa catcagcaaa atcaccaatc 5041 acccagtccc atgagggctt ttgggtccca agaattgctg aatgtaaagt cgcagccatt 5101 gcgtaatggt ggacaccaaa gacctgatag tgatgaggtg gattgtctgc cgcaaaggcc 5161 tcctctgcca ccacaagctc tacaacagag gcaacaacta cagcagcaac tccaagcaaa 5221 acagatgtcc tccatattac ctaagcccaa atatgatata tcccaaacac aaatcgccga 5281 ggaaatccgg gaagtggagc ttcttaacaa catggtgcaa cagacgctaa ataacaatcc 5341 ctcccaacca gctgccacta acaacaacgc cgctcccaaa cgggtaaaga agaagagtgt 5401 atcgttctgt gatcaagtga tactggtggc aaccgccgac aatgaggaag atgatgattt 5461 tatacccaat cccattttgg aaagagtcct aaggaccgct cagagtccca atgacaaagt 5521 gacggcacag atgatacaac agcaacaaca aaatatcatg aggctacaga cggaggcacc 5581 cagccgcgca gtacaatcgc aacagcagtt gggtttgacc gcacaaatgc agcaacagca 5641 gcagcatcaa caactagggc cacattcacc gcttacacaa aatcagcaac aacagcaaat 5701 ggctcaacca tcgcccttgt taggaacgga gagaagaaat gttggccttt cgggtccaca 5761 ggaaatgcaa cgttatgtgc agttgcaaag acctcaattg gaggctttgc gcctgcagca 5821 acaacaaatc cagcagcagc atcaacaaca gatgcaacag cagcatcatc agcaaatgca 5881 gctacaacaa atgcagcaaa agcctcaact gcaggcaggc caagtttaca cacccatcca 5941 ggatatttat cgcatgcaac agcagcaaca acaacaacaa cagcaacagc agcagttaac 6001 tgcaagcaat actttatcct cgcatctcaa tgaaacatcc gcccaaaatt ccctgcaatc 6061 acgcaccagt atgagcggca tcgctaatgt tgccgcgtcg caacatatgc agatgttggc 6121 aacgcataca acacaaaatc aacttcagca gcaacaacaa caacaacaac atcacctgcc 6181 ccaaaactat tcactgccca gattgggcaa tgcccaagca cccactaatt attatcctgg 6241 cattgcaggt ctagaacagc ctccgccaag ccaacaacac ataccctcgc cctatcaaag 6301 agtaccccta ccccatggct atcctggcct tgctgagcct gcgacactct taaatcgtcc 6361 cccacatcta attaatcccc aaaacccatc caacgtccat cctggaagtc cctacatgtc 6421 cataccttcc aactcgcaaa tagcacaaaa tcagccggtc aaagcgaaga aggtgagctt 6481 tgaacctggc accaaaggag acgccagcga agccacaccc aattcaagca cgcttccgcc 6541 caagaccatg ttgcaacaac atggtttacc cctacccgcc caacaagctg cagcatccaa 6601 cggtctgcca ccaccagcca ccagcgatgg cagcaatgtg aacgtaactg ccatacccac 6661 tcgtgtctac aacaatgcca tcgtaaaagc ttcagccaaa gcttcggagt gcaatttgtg 6721 tcgcaagcgt catgtcatag ccccccaaca gtactgtacc aactgcgagt actacttgaa 6781 gatgttgaac aatcggagat agaaaccaga gaacacaaaa gctgcagttt gataacaaaa 6841 aaagaaagtt caaactctcg aagtaatggt taacggaggc attgctttgc atttttcatg 6901 taaacgaaag catttcatat atgttattga aaatcgtcct tttagtcctt aagctcacca 6961 ataagttgta gtttttaatg ctagttcttt aggtgttttg aaaagaatct catatgatgc 7021 ta