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LOCUS XM_013243353 6585 bp mRNA linear INV 02-SEP-2023 (LOC106081420), transcript variant X2, mRNA. ACCESSION XM_013243353 VERSION XM_013243353.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013243353.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6585 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6585 /gene="LOC106081420" /note="uncharacterized LOC106081420; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106081420" CDS 720..6365 /gene="LOC106081420" /codon_start=1 /product="uncharacterized protein LOC106081420 isoform X2" /protein_id="XP_013098807.2" /db_xref="GeneID:106081420" /translation="MATMDTVAIKTAPPHAPLASSLHHQQQQQQQHSKHSKHSLARTH SSSSCSNISTSSSSCQANNPSLSNPNIAAGSANNDAIYNKSSIGAFFQTCKVLWHLDA FRRSFRSLNQHVCSGQDCIFCALKELFQQLQTSSEPALCPEPLRRALASGPLAGRRFP LGCLGDAAECFELLLHRVHSHISSDDGDACESQACIAHRRFAMRVIEQSVCKCGANSE QLPFTQMVHYVSASALTSQNSLALQNHQQLTFGQLLRAAGNMGDIRDCPSSCGAKIGI CRALLNRPDVVSIGIVWDSERPAADQVHSVLKAVGTSLRLSDVFHQVSEQRWAQTVQH ELVGIVSYYGKHYTTFFFHTKLKVWVYFDDANVKEVGPHWEGVVDKCSRGRYQPLLLL YAVPQPQQQSSANCPTQVSTSQYMHDTQSPAVRRAITPSPEKPQMGNTRRAITPTPLR MPNDYQNLSVIQKNIFPSGGGQHQQPPQVSEKHGAHLNTDETDSYISRKTVEHVLNAQ YQNLSIIQDKIFPQDEKDVAVLNNYQQRKSLEAVLNAQLARKHQQHLQLQRSHSAESG HVSGSSASSTTSSTNSSSPPSDGLTIPEHLNQPRRRDSGNWSGDRNSASSASSTTLDN PYLYMVGKRSGAAVPQSPTRNGLPYDPGYDSFSLSSTDSYPPKHPLNPQLAKIPESSP SVVLTGDCEKLCHEADQLLEKSRILEEALDLETALVLCNAAAGRARAAMDAPYSNPHT MTFARMKHNTCVMRARSLHRRILLEKGAEMDAMPEMKHMREGSTSSVIKHVRQNSKDK TLDGNNGGNNSSPTANNPNKSIEIYATLPKKKSPLKALVSASLASNDTDNIEFEATQV TPKPERESRSLFGRSSNKQQEKDKRSRSEDRNKISREFSLTETLLVNAKDTLKKHKED KDEKKEKDKNGKKQHKIRRKLLMGGLIRRKNRSMPDLTEAGDETSNAQQAVANPPPLT SSVDDSVVGLQHANSMSGYISEGHFDFRDSTGTSSNGVNANPNLERSKLMRKSFHGSG RQLTVVAKVQPPPPPMRTSSTLTQQQLQQQLALQQQQDAALMQHFHHEATLSNISAMS SNTSISEDSCQTIITTCAQVHSEQSPLAKEQMYQQAYKASTEQGTDEVDGIPANANHQ HARQDSQEFPPPPPPLELPPYPSPPHSVSHSRQASEDFPPPPPEIDMEPLNQQINQIQ ALEAANKQQQHQRNMESMEGTTSILAQLQQRQHLMKMRKEHGNTPTFMQGNQNENSWL RELQLKQLQRQPDLTNVQSIAQRYEQHQQNHQSPSPMRAFGSQELLNVKSQPLRNGGH QRPDSDEVDCLPQRPPLPPQALQQRQQLQQQLQAKQMSSILPKPKYDISQTQIAEEIR EVELLNNMVQQTLNNNPSQPAATNNNAAPKRVKKKSVSFCDQVILVATADNEEDDDFI PNPILERVLRTAQSPNDKVTAQMIQQQQQNIMRLQTEAPSRAVQSQQQLGLTAQMQQQ QQHQQLGPHSPLTQNQQQQQMAQPSPLLGTERRNVGLSGPQEMQRYVQLQRPQLEALR LQQQQIQQQHQQQMQQQHHQQMQLQQMQQKPQLQAGQVYTPIQDIYRMQQQQQQQQQQ QQQLTASNTLSSHLNETSAQNSLQSRTSMSGIANVAASQHMQMLATHTTQNQLQQQQQ QQQHHLPQNYSLPRLGNAQAPTNYYPGIAGLEQPPPSQQHIPSPYQRVPLPHGYPGLA EPATLLNRPPHLINPQNPSNVHPGSPYMSIPSNSQIAQNQPVKAKKVSFEPGTKGDAS EATPNSSTLPPKTMLQQHGLPLPAQQAAASNGLPPPATSDGSNVNVTAIPTRVYNNAI VKASAKASECNLCRKRHVIAPQQYCTNCEYYLKMLNNRR" polyA_site 6585 /gene="LOC106081420" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 taatgaaaac taaacaaaaa ttactcaaat ttagttgagg cttaaacgca aaatcttctt 61 aaattgaatt atttacaatg acacaaagta aggttaccat aaagtatttg ttaggctaac 121 gtagtgcaaa tttttggtaa ccatcaatga tgcgatgtgt agtgcgtgtt ataaatgttg 181 caccttacgt ttaatgataa atgacccttt ggaatcttct ctggactttt aagaggcttg 241 aaagaaataa aacaagcagg tgcatttaaa gttaacgaaa atttggcgaa gaagttacaa 301 tacaaacata tgttgctaac catccactaa acaaaagtaa aacaaaaact atcccttgtt 361 gccaaaaggt gaaatactaa aaaacggttt aaaagtaggg gatgttcctt tgtagaaaac 421 gtcccttctt cgatactcaa tgaaaaaaaa agaaactaca gccataaaaa agttgccatt 481 taaaaaactt ggattcacta ctcccttaat tcgtttgtaa ctcgtttatg caaaaacaaa 541 aaatcctatc gagtatacac ccaacatgtt accaatgaag cataaaacta caacttgaat 601 aaataataaa aaaccattaa cacaataaca actgtttcga tagttttctt tgtgactaaa 661 acaaaaattg tgcataaaat taaccactca accctcgaat cattaataaa caaatcacaa 721 tggcaacaat ggataccgta gctattaaaa ctgcgccacc ccatgctccc ttggcttcat 781 cgctccacca tcaacaacaa cagcagcagc aacactcaaa gcattccaag catagtttgg 841 ctcgtaccca cagcagcagc agctgcagca atatctccac gtcctcctcc tcttgccagg 901 ccaataatcc cagtcttagt aaccccaata ttgctgctgg ttcagccaac aatgatgcga 961 tctacaacaa atcaagtatt ggcgcatttt ttcaaacttg caaggtcctg tggcatttag 1021 atgcttttcg acgatcattt cgttctttga atcaacatgt atgcagtggc caagactgca 1081 ttttctgtgc tctaaaggaa ctgtttcaac aattacaaac tagctcggag ccggccttat 1141 gccctgaacc cttgcgtcgt gccttagcct ctggtccctt ggctgggcgc cgctttcctt 1201 tgggatgttt aggcgatgct gccgaatgtt ttgagctgct attgcatcgt gtacactctc 1261 atatctcctc ggatgatggt gatgcctgcg aatcacaggc ctgtattgcc cataggcgtt 1321 ttgctatgcg tgttatagag caaagtgttt gcaaatgtgg tgccaattca gagcagttgc 1381 catttacaca gatggtccat tatgtgtcgg cttcggcatt gacttcacaa aattcattgg 1441 ctttgcagaa tcatcagcag ttgacttttg gccaactgtt aagggcagca ggaaatatgg 1501 gtgacatacg cgattgtccg agttcctgtg gtgccaaaat tggcatttgt cgtgccttgc 1561 tgaaccgccc cgacgtagtg tccattggca ttgtttggga ctcggaaagg cctgctgccg 1621 atcaggttca ttcggttttg aaagccgtag gcaccagcct tcgtttgtcc gatgtcttcc 1681 atcaggtcag cgagcaaaga tgggctcaaa cggtacagca cgagctagtg ggcattgttt 1741 catattatgg caagcattac accaccttct tcttccatac caaactcaag gtttgggttt 1801 atttcgatga tgccaatgtt aaagaggttg gcccccattg ggaaggtgtt gtggataaat 1861 gcagtcgtgg gcgctatcaa ccgttactgc tactctatgc cgtaccccag ccccaacaac 1921 aatcttcggc aaattgtcct actcaagtgt ctacgagcca gtacatgcat gacactcaat 1981 cgccagcagt gcgccgagct ataactccca gtcccgagaa accgcaaatg ggcaatacta 2041 gacgtgccat tacccccacg ccattgcgca tgcccaatga ctaccaaaac ttgagtgtta 2101 tacaaaagaa tatctttccc tcggggggag gccaacatca gcagccacct caagtatcgg 2161 aaaaacatgg agcccacttg aatacagacg agaccgactc ctatatcagc cgcaaaacag 2221 tggagcatgt cctcaatgcc caatatcaga atttgagtat tattcaggat aaaatatttc 2281 cacaagatga gaaggatgtt gccgtgctga ataactacca gcaacgtaaa tcattggagg 2341 cggtattgaa tgctcagttg gcacgtaaac atcaacaaca tttgcagctg caaagatcgc 2401 atagtgccga gtcgggtcat gtttctggct cgtctgcctc ctcgaccaca tcttccacta 2461 acagctcatc gcctcccagt gatggtttga ccatacccga acacttaaat cagccacgac 2521 gtcgtgattc gggtaattgg tctggagatc gcaattccgc aagttctgct tcttcaacca 2581 ctttggacaa tccctatctg tatatggtgg gcaaacgttc gggggctgct gttccgcaaa 2641 gtcccacacg caatggtttg ccttatgatc caggctacga ctctttctcg ctgagctcca 2701 ccgactcgta tccacctaaa catcctttga atccccaact ggccaaaata ccagagtcat 2761 ctccctcggt tgtactcact ggagactgtg aaaagttatg tcacgaagcc gatcaattgc 2821 tggagaaatc acgtatccta gaagaggcgc ttgacttgga aacagcactg gtcctttgca 2881 atgccgctgc cggtagggct cgagcagcca tggatgctcc ttacagcaat cctcatacca 2941 tgacttttgc tcgcatgaag cacaatacct gtgtgatgag ggctcgttcc ttgcatagac 3001 gcattttgct ggagaaggga gcggaaatgg atgccatgcc tgaaatgaag cacatgcgtg 3061 agggcagcac cagcagtgtc attaagcacg tgcgccaaaa tagcaaagac aagactctag 3121 atggcaataa tggtggcaac aacagttctc ctactgccaa caatcccaac aaatccatag 3181 aaatatatgc gactttgccc aaaaagaaga gtcccttgaa ggctttggtc tcggcttcct 3241 tagcctccaa tgataccgat aatattgagt ttgaagcaac acaggttact cctaagcccg 3301 agagggaaag tcgctcttta ttcgggcgta gcagcaataa gcaacaggag aaggacaagc 3361 gaagtcgcag tgaagatcgc aataagatca gccgggagtt ttctcttact gaaaccttgc 3421 tggtcaatgc taaagacact ttgaagaaac acaaggagga taaggatgag aaaaaggaga 3481 aggacaaaaa tggcaagaag cagcataaga tacgacgcaa gttgttaatg ggtggtttga 3541 tacgacgcaa gaaccgttcc atgcccgact tgacggaggc tggagatgag actagtaatg 3601 ctcaacaggc cgtcgccaat ccacctcccc taaccagttc tgtggatgac tcagtggtcg 3661 gtttgcaaca tgccaactcc atgagtggat acatatcgga gggtcacttt gacttccgcg 3721 atagcacagg gacctcctcg aatggggtca atgccaatcc caatttggaa cgcagcaagc 3781 taatgcgtaa aagtttccat ggaagcggac gtcaattgac agtggtggcg aaagtacagc 3841 ctccaccacc acccatgcgt acatcctcga ccttaacgca gcagcagttg caacaacagc 3901 ttgctttgca gcaacagcaa gatgccgcct taatgcaaca cttccatcac gaggcgactc 3961 tctccaatat atcggccatg agttcgaata cctcaataag tgaggattcg tgtcagacca 4021 tcattaccac ctgcgctcaa gttcactccg aacaaagccc tttggccaag gaacaaatgt 4081 atcaacaagc ctataaggct tcgaccgagc agggcacaga tgaagttgat ggcattcccg 4141 ccaacgcgaa tcatcaacat gcgcgtcaag attcacaaga attcccccca cccccgcctc 4201 cattggaact accaccgtat cctagtccac cgcacagtgt gagccattcc aggcaagcca 4261 gtgaagattt tccaccacca cctcctgaaa tcgatatgga gccgttgaat caacaaatca 4321 atcaaatcca agccctagaa gcggccaaca agcaacaaca gcaccagaga aatatggagt 4381 ccatggaggg taccaccagc attttggctc agctgcagca acggcaacat ttaatgaaaa 4441 tgcgcaaaga acatggcaat actcccactt ttatgcaggg caaccagaat gagaactctt 4501 ggttaaggga attgcaattg aagcaattac agcgccaacc tgatttaacc aacgttcaat 4561 cgattgctca acgctatgag caacatcagc aaaatcacca atcacccagt cccatgaggg 4621 cttttgggtc ccaagaattg ctgaatgtaa agtcgcagcc attgcgtaat ggtggacacc 4681 aaagacctga tagtgatgag gtggattgtc tgccgcaaag gcctcctctg ccaccacaag 4741 ctctacaaca gaggcaacaa ctacagcagc aactccaagc aaaacagatg tcctccatat 4801 tacctaagcc caaatatgat atatcccaaa cacaaatcgc cgaggaaatc cgggaagtgg 4861 agcttcttaa caacatggtg caacagacgc taaataacaa tccctcccaa ccagctgcca 4921 ctaacaacaa cgccgctccc aaacgggtaa agaagaagag tgtatcgttc tgtgatcaag 4981 tgatactggt ggcaaccgcc gacaatgagg aagatgatga ttttataccc aatcccattt 5041 tggaaagagt cctaaggacc gctcagagtc ccaatgacaa agtgacggca cagatgatac 5101 aacagcaaca acaaaatatc atgaggctac agacggaggc acccagccgc gcagtacaat 5161 cgcaacagca gttgggtttg accgcacaaa tgcagcaaca gcagcagcat caacaactag 5221 ggccacattc accgcttaca caaaatcagc aacaacagca aatggctcaa ccatcgccct 5281 tgttaggaac ggagagaaga aatgttggcc tttcgggtcc acaggaaatg caacgttatg 5341 tgcagttgca aagacctcaa ttggaggctt tgcgcctgca gcaacaacaa atccagcagc 5401 agcatcaaca acagatgcaa cagcagcatc atcagcaaat gcagctacaa caaatgcagc 5461 aaaagcctca actgcaggca ggccaagttt acacacccat ccaggatatt tatcgcatgc 5521 aacagcagca acaacaacaa caacagcaac agcagcagtt aactgcaagc aatactttat 5581 cctcgcatct caatgaaaca tccgcccaaa attccctgca atcacgcacc agtatgagcg 5641 gcatcgctaa tgttgccgcg tcgcaacata tgcagatgtt ggcaacgcat acaacacaaa 5701 atcaacttca gcagcaacaa caacaacaac aacatcacct gccccaaaac tattcactgc 5761 ccagattggg caatgcccaa gcacccacta attattatcc tggcattgca ggtctagaac 5821 agcctccgcc aagccaacaa cacataccct cgccctatca aagagtaccc ctaccccatg 5881 gctatcctgg ccttgctgag cctgcgacac tcttaaatcg tcccccacat ctaattaatc 5941 cccaaaaccc atccaacgtc catcctggaa gtccctacat gtccatacct tccaactcgc 6001 aaatagcaca aaatcagccg gtcaaagcga agaaggtgag ctttgaacct ggcaccaaag 6061 gagacgccag cgaagccaca cccaattcaa gcacgcttcc gcccaagacc atgttgcaac 6121 aacatggttt acccctaccc gcccaacaag ctgcagcatc caacggtctg ccaccaccag 6181 ccaccagcga tggcagcaat gtgaacgtaa ctgccatacc cactcgtgtc tacaacaatg 6241 ccatcgtaaa agcttcagcc aaagcttcgg agtgcaattt gtgtcgcaag cgtcatgtca 6301 tagcccccca acagtactgt accaactgcg agtactactt gaagatgttg aacaatcgga 6361 gatagaaacc agagaacaca aaagctgcag tttgataaca aaaaaagaaa gttcaaactc 6421 tcgaagtaat ggttaacgga ggcattgctt tgcatttttc atgtaaacga aagcatttca 6481 tatatgttat tgaaaatcgt ccttttagtc cttaagctca ccaataagtt gtagttttta 6541 atgctagttc tttaggtgtt ttgaaaagaa tctcatatga tgcta