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LOCUS XM_013243345 3553 bp mRNA linear INV 02-SEP-2023 transcript variant X4, mRNA. ACCESSION XM_013243345 VERSION XM_013243345.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013243345.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3553 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3553 /gene="LOC106081415" /note="PDF receptor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins" /db_xref="GeneID:106081415" CDS 844..3201 /gene="LOC106081415" /codon_start=1 /product="PDF receptor isoform X1" /protein_id="XP_013098799.2" /db_xref="GeneID:106081415" /translation="MTMASGTSSKNDTIEAQAYNISDLNLAQTIHKAAVKLLTKRNVI QGTIETKEGMEVAATQQPPTTVTLSSLDKSLLESIATIRKNVSQVLHMYFRTLSANLT RTTTTPEVFLSKQLDNGGPSINTMDEVPNAPATMATTPTQLIAQMTTTMTLDNFPKST FYNSSSSESNNVISTAMVHLADVANATLTTTSPPALSSLAAASTTVTTVVRNITYPSY GIPISSSENCSALFSNYTPPETGLYCNWTWDMFICWPPTPAGVLAHMSCPSGFHGVDA RKFANRKCELNGHWGGRPNEPPNPIGWTDYNPCFKPEVKTLLDKVPNLELVVEIAKRT RTLEIVGLILSLVALILSLIIFCNFRSLRNNRTKIHKNLFIAMVLQVVIRLSLYLDQA FRRDKSETITNTSLSGIENTPYLCETSYILLEYAKTAMFMWMFIEGWYLHNMVTVSVF QGRFPYKLYSIVGWGVPVLMTTIWGLCTSIHYADTMHDCWWNYNLTPYYWILEGPRIV IITINFAFLLNIIRVLVMKLRESQASDIEQTRKAVRAAIVLLPLLGTINVLYLIPTLE TPWKFALWSYATHFLNTFQGFFIALIYCFLNGEVRAVLLKSLAVYMSVRGHPEWVPKR ASMYSAGYNTAHDTENQHADRKGNGSPSSKRLNGRKGSCSTVIQTNSNRSHKKSPRLS HSNASGQPNLNHLPLPPNSNHHQHHPTQRMDSMPSDNNNGGSLTSLQTLGRHHTQHHH HHHHYQRRPHHSWLLTLCFRGQKVLRVPPASSEPPESVVFELSEQ" ORIGIN 1 ttttagcttt ttccgatttt tatgttttcc atattgctgt gatgtttcaa tttcgtgtct 61 gtagctgagg ctgctgatgc ggcgttttat ttgctctggg cacacaaaca atactgcctt 121 tgcggacgga cacattacgg ttttgccacc ttccacttgg acttttcttt gcttgttggt 181 acattgccgc cattgtgtgt tgaggttttt ggaagatgtt gcgactttta tttagtcgct 241 tgatatcttt cgttgtgtaa agtttagcgc aaagtgacga tcatactgcg aagaaaaaga 301 taagaaagaa cttaacagaa aaaaacaagt gaaaagaaaa aatcccctag catgaaaggt 361 tgatgttgtt tttttttttt tttttttttt gcataaagaa gtgtgaaatg aaaaaagtat 421 gagaataaac tttcatgtgg aatgaatcat aattatgtga aacaaagttt tgttattatt 481 aaatagcaag aaaaatagtt ggcagcataa ggaaatccca ctctaaggat ggaaaaaagt 541 tggcaataat tgtatgcaat atagcattat tagcaaacaa aatgggaaag taaaaaagta 601 gaggaatatg ttcgtcttga agacagttac tacacataaa agtttaaaaa ataacatttt 661 gcgtgaaaat gatataaaca gagaataaaa aaaaaaacag tctgcagtgg tataaaaaag 721 tttcttgcgt caattgtagc gccccatcaa aggattacac ttaatcagaa atcccaccca 781 taaacaacag ctttttacta ctactcccac ctccccgttg ctgcttccaa tgttcagcat 841 cacatgacaa tggcttcagg gacatcatca aagaatgaca caattgaagc ccaagcttac 901 aatataagtg atttgaattt agctcaaact atacacaagg ctgccgtgaa attgttaact 961 aaacgcaatg tcattcaagg taccatcgaa acgaaagaag gcatggaggt ggcagccaca 1021 caacagccac ccactacggt tacgctgagt agcctggaca aaagtttgct tgagagcata 1081 gctacaatac gcaaaaatgt atcccaagta ttgcatatgt actttcgcac tttaagtgcg 1141 aatctcacaa ggacaactac tacgcccgag gtatttctga gtaagcaact ggacaatggt 1201 ggacccagca tcaatacaat ggatgaagta cccaacgccc ccgcaacgat ggcaaccaca 1261 ccaactcaat taatagccca aatgactaca acaatgactt tggacaattt cccaaaatcc 1321 accttttaca atagcagcag ttcggaaagc aacaacgtga tatcgacagc aatggtccac 1381 ttagcagatg tggcaaatgc cacgctgaca acgacatcac cacctgcttt atcctcccta 1441 gcagctgcct cgaccaccgt aacaactgta gtgcggaata taacatatcc cagttatggc 1501 ataccaatta gtagctcgga aaattgttca gccctatttt cgaactatac gcctccagag 1561 acgggtttat actgcaattg gacgtgggat atgtttatat gctggccgcc aacaccagcc 1621 ggtgttcttg cccacatgag ttgtccatca ggatttcatg gtgtggatgc gagaaaattt 1681 gccaatcgta aatgtgaact taatggccac tggggtggac gtcctaatga accgcccaat 1741 cccattggtt ggactgatta caatccttgt tttaagccag aagtaaaaac gttattagat 1801 aaagtgccaa atcttgagct agttgtagaa attgctaagc gaacacgtac cttggaaatt 1861 gttggcctta tactgtctct ggtggcttta attttatcct taattatatt ttgtaatttt 1921 cgttcattgc gcaataatcg tacaaaaatc cataaaaatc tcttcattgc aatggtcctg 1981 caagttgtca tacgtttgtc gctgtacttg gatcaggcat ttcgtcgtga taaatcagag 2041 accataacga atacaagtct atcgggaatt gagaatacgc cctacctttg tgaaacctcc 2101 tacatcttgc tggaatatgc caagacggca atgttcatgt ggatgttcat tgaaggctgg 2161 tatctgcata atatggtaac agtatcagta tttcaaggac gatttcccta caaactctac 2221 tccatagtgg gctggggtgt acccgtgcta atgaccacaa tatggggtct atgcacatcg 2281 atacactatg ccgatacaat gcatgattgt tggtggaatt ataatttaac accatactat 2341 tggatattag agggaccgcg tatagttata ataacgataa attttgcatt tcttttgaat 2401 atcatacgtg tattggtcat gaaattgcgc gaaagccagg ccagtgatat agagcagacc 2461 cgtaaagcgg ttagggctgc cattgtttta ctgcctttgt tgggcaccat taatgttttg 2521 tatttaatac cgaccctaga gacaccctgg aaattcgcct tgtggtccta tgcgacacat 2581 ttcctaaata catttcaggg attttttata gcactgatat attgtttcct aaatggagag 2641 gtaagggcag ttttacttaa aagtttggcc gtttatatgt cagtacgcgg ccatccagaa 2701 tgggttccta aaagagcttc catgtattcg gcaggctata ataccgccca tgatacagaa 2761 aatcaacatg ctgatagaaa aggcaatggt tcaccttcct caaaacgttt gaatggccgc 2821 aaaggtagct gctctactgt gattcagacc aactcaaatc gaagtcataa aaagtcgcct 2881 agactatcgc acagtaatgc cagtggccag cccaatctta atcatctgcc gctgccaccc 2941 aactcaaatc atcatcaaca ccatccaacg cagcgtatgg atagcatgcc cagtgataat 3001 aataatggtg gaagtttaac tagcctgcaa acgctggggc gtcaccatac gcaacatcat 3061 caccaccatc atcattatca gaggcgtcca catcatagct ggttgctaac attgtgtttt 3121 cgcggccaaa aggtacttag ggtaccgcca gcgtcgtccg aacctcctga gtcagttgta 3181 tttgagttgt cagagcagta gttaaataat cttgttgcgc tttagttttt tttcctagca 3241 ttttgtaata gcctacttat ttttgcttaa tttatttatc tatttttttc taatagctaa 3301 ataatttttt ttataaactt ttcttgctct ttatttctat atacatagat atatagcaaa 3361 tatagtagtc gcatatattt ttgatacaaa ctcttataac acaatgtagc tctacatata 3421 aatcactaat ctcttaggca ccttggactt ttttacacct atacgttatg ttaatactca 3481 tatcttgctt agagtatgag taacactact aataccacct atagttagac acatttttgt 3541 atataaacaa att