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LOCUS XM_013243344 3680 bp mRNA linear INV 02-SEP-2023 transcript variant X3, mRNA. ACCESSION XM_013243344 VERSION XM_013243344.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013243344.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3680 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3680 /gene="LOC106081415" /note="PDF receptor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins" /db_xref="GeneID:106081415" CDS 971..3328 /gene="LOC106081415" /codon_start=1 /product="PDF receptor isoform X1" /protein_id="XP_013098798.2" /db_xref="GeneID:106081415" /translation="MTMASGTSSKNDTIEAQAYNISDLNLAQTIHKAAVKLLTKRNVI QGTIETKEGMEVAATQQPPTTVTLSSLDKSLLESIATIRKNVSQVLHMYFRTLSANLT RTTTTPEVFLSKQLDNGGPSINTMDEVPNAPATMATTPTQLIAQMTTTMTLDNFPKST FYNSSSSESNNVISTAMVHLADVANATLTTTSPPALSSLAAASTTVTTVVRNITYPSY GIPISSSENCSALFSNYTPPETGLYCNWTWDMFICWPPTPAGVLAHMSCPSGFHGVDA RKFANRKCELNGHWGGRPNEPPNPIGWTDYNPCFKPEVKTLLDKVPNLELVVEIAKRT RTLEIVGLILSLVALILSLIIFCNFRSLRNNRTKIHKNLFIAMVLQVVIRLSLYLDQA FRRDKSETITNTSLSGIENTPYLCETSYILLEYAKTAMFMWMFIEGWYLHNMVTVSVF QGRFPYKLYSIVGWGVPVLMTTIWGLCTSIHYADTMHDCWWNYNLTPYYWILEGPRIV IITINFAFLLNIIRVLVMKLRESQASDIEQTRKAVRAAIVLLPLLGTINVLYLIPTLE TPWKFALWSYATHFLNTFQGFFIALIYCFLNGEVRAVLLKSLAVYMSVRGHPEWVPKR ASMYSAGYNTAHDTENQHADRKGNGSPSSKRLNGRKGSCSTVIQTNSNRSHKKSPRLS HSNASGQPNLNHLPLPPNSNHHQHHPTQRMDSMPSDNNNGGSLTSLQTLGRHHTQHHH HHHHYQRRPHHSWLLTLCFRGQKVLRVPPASSEPPESVVFELSEQ" ORIGIN 1 ttttagcttt ttccgatttt tatgttttcc atattgctgt gatgtttcaa tttcgtgtct 61 gtagctgagg ctgctgatgc ggcgttttat ttgctctggg cacacaaaca atactgcctt 121 tgcggacgga cacattacgg ttttgccacc ttccacttgg acttttcttt gcttgttggt 181 acattgccgc cattgtgtgt tgaggttttt ggaagatgtt gcgactttta tttagtcgct 241 tgatatcttt cgttgtgtaa agtttagcgc aaagtgacga tcatactgcg aagaaaaaga 301 taagaaagaa cttaacagaa aaaaacaagt gaaaagaaaa aatcccctag catgaaaggt 361 tgatgttgtt tttttttttt tttttttttt gcataaagaa gtgtgaaatg aaaaaagtat 421 gagaataaac tttcatgtgg aatgaatcat aattatgtga aacaaagttt tgttattatt 481 aaatagcaag aaaaatagtt ggcagcataa ggaaatccca ctctaaggat ggaaaaaagt 541 tggcaataat tgtatgcaat atagcattat tagcaaacaa aatgggaaag taaaaaagta 601 gaggaatatg ttcgtcttga agacagttac tacacataaa agtttaaaaa ataacatttt 661 gcgtgaaaat gatataaaca gagaataaaa aaaaaaacag tctgcagtgg tataaaaaat 721 aaaagtgtaa tctggatgta ccagcttcta tataaatttt aaacatgaat tagttgaaga 781 ttgaagctac ataatacata ctaaaaaaat attgaagaac ctttacttta tacttttggt 841 acttgggttt cttgcgtcaa ttgtagcgcc ccatcaaagg attacactta atcagaaatc 901 ccacccataa acaacagctt tttactacta ctcccacctc cccgttgctg cttccaatgt 961 tcagcatcac atgacaatgg cttcagggac atcatcaaag aatgacacaa ttgaagccca 1021 agcttacaat ataagtgatt tgaatttagc tcaaactata cacaaggctg ccgtgaaatt 1081 gttaactaaa cgcaatgtca ttcaaggtac catcgaaacg aaagaaggca tggaggtggc 1141 agccacacaa cagccaccca ctacggttac gctgagtagc ctggacaaaa gtttgcttga 1201 gagcatagct acaatacgca aaaatgtatc ccaagtattg catatgtact ttcgcacttt 1261 aagtgcgaat ctcacaagga caactactac gcccgaggta tttctgagta agcaactgga 1321 caatggtgga cccagcatca atacaatgga tgaagtaccc aacgcccccg caacgatggc 1381 aaccacacca actcaattaa tagcccaaat gactacaaca atgactttgg acaatttccc 1441 aaaatccacc ttttacaata gcagcagttc ggaaagcaac aacgtgatat cgacagcaat 1501 ggtccactta gcagatgtgg caaatgccac gctgacaacg acatcaccac ctgctttatc 1561 ctccctagca gctgcctcga ccaccgtaac aactgtagtg cggaatataa catatcccag 1621 ttatggcata ccaattagta gctcggaaaa ttgttcagcc ctattttcga actatacgcc 1681 tccagagacg ggtttatact gcaattggac gtgggatatg tttatatgct ggccgccaac 1741 accagccggt gttcttgccc acatgagttg tccatcagga tttcatggtg tggatgcgag 1801 aaaatttgcc aatcgtaaat gtgaacttaa tggccactgg ggtggacgtc ctaatgaacc 1861 gcccaatccc attggttgga ctgattacaa tccttgtttt aagccagaag taaaaacgtt 1921 attagataaa gtgccaaatc ttgagctagt tgtagaaatt gctaagcgaa cacgtacctt 1981 ggaaattgtt ggccttatac tgtctctggt ggctttaatt ttatccttaa ttatattttg 2041 taattttcgt tcattgcgca ataatcgtac aaaaatccat aaaaatctct tcattgcaat 2101 ggtcctgcaa gttgtcatac gtttgtcgct gtacttggat caggcatttc gtcgtgataa 2161 atcagagacc ataacgaata caagtctatc gggaattgag aatacgccct acctttgtga 2221 aacctcctac atcttgctgg aatatgccaa gacggcaatg ttcatgtgga tgttcattga 2281 aggctggtat ctgcataata tggtaacagt atcagtattt caaggacgat ttccctacaa 2341 actctactcc atagtgggct ggggtgtacc cgtgctaatg accacaatat ggggtctatg 2401 cacatcgata cactatgccg atacaatgca tgattgttgg tggaattata atttaacacc 2461 atactattgg atattagagg gaccgcgtat agttataata acgataaatt ttgcatttct 2521 tttgaatatc atacgtgtat tggtcatgaa attgcgcgaa agccaggcca gtgatataga 2581 gcagacccgt aaagcggtta gggctgccat tgttttactg cctttgttgg gcaccattaa 2641 tgttttgtat ttaataccga ccctagagac accctggaaa ttcgccttgt ggtcctatgc 2701 gacacatttc ctaaatacat ttcagggatt ttttatagca ctgatatatt gtttcctaaa 2761 tggagaggta agggcagttt tacttaaaag tttggccgtt tatatgtcag tacgcggcca 2821 tccagaatgg gttcctaaaa gagcttccat gtattcggca ggctataata ccgcccatga 2881 tacagaaaat caacatgctg atagaaaagg caatggttca ccttcctcaa aacgtttgaa 2941 tggccgcaaa ggtagctgct ctactgtgat tcagaccaac tcaaatcgaa gtcataaaaa 3001 gtcgcctaga ctatcgcaca gtaatgccag tggccagccc aatcttaatc atctgccgct 3061 gccacccaac tcaaatcatc atcaacacca tccaacgcag cgtatggata gcatgcccag 3121 tgataataat aatggtggaa gtttaactag cctgcaaacg ctggggcgtc accatacgca 3181 acatcatcac caccatcatc attatcagag gcgtccacat catagctggt tgctaacatt 3241 gtgttttcgc ggccaaaagg tacttagggt accgccagcg tcgtccgaac ctcctgagtc 3301 agttgtattt gagttgtcag agcagtagtt aaataatctt gttgcgcttt agtttttttt 3361 cctagcattt tgtaatagcc tacttatttt tgcttaattt atttatctat ttttttctaa 3421 tagctaaata atttttttta taaacttttc ttgctcttta tttctatata catagatata 3481 tagcaaatat agtagtcgca tatatttttg atacaaactc ttataacaca atgtagctct 3541 acatataaat cactaatctc ttaggcacct tggacttttt tacacctata cgttatgtta 3601 atactcatat cttgcttaga gtatgagtaa cactactaat accacctata gttagacaca 3661 tttttgtata taaacaaatt