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LOCUS XM_013243198 3490 bp mRNA linear INV 02-SEP-2023 (LOC106081313), transcript variant X3, mRNA. ACCESSION XM_013243198 VERSION XM_013243198.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013243198.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3490 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3490 /gene="LOC106081313" /note="b(0,+)-type amino acid transporter 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:106081313" CDS 1326..2900 /gene="LOC106081313" /codon_start=1 /product="b(0,+)-type amino acid transporter 1 isoform X3" /protein_id="XP_013098652.1" /db_xref="GeneID:106081313" /translation="MRDKISQLFCLPKNACKHNSTDNRGQSVPNKATLNGGTTCTNGS IGPEGPEATETDSSGTGGMRKSLERKGSAPNDAVHLQRRVGLFSGVALIVGTMIGSGI FVSPSGLLARTGSVGVSFIIWLACGVLSLMGALAYAELGTMNTSSGAEWAYFMDAYGP APAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVSECDPPMSVVKMVALVAIVMILF VNCYSVNLGMAVQNVFTAAKLVAVLIVICGGAWKLIQGNTQHLANAFNGPTPNVGAVA TAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIVIAAMSPTEMVQSEAVAVTFGNRI LGVMAWLMPLSVTVSTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGL IFHSLIAAAMVLYGTIDSLIDFFSFTAWIFYGGSMLALIVMRFTKPNYPRPYKVPIII PVVVLVISMYLVVAPIIDSPRIEYLYALLFIFAGLIFYIPFVKLGMTPRFMNKVTLFL QLLLEVVPTSSMALFD" misc_feature 1509..2870 /gene="LOC106081313" /note="L-type amino acid transporter; Region: 2A0308; TIGR00911" /db_xref="CDD:273332" polyA_site 3490 /gene="LOC106081313" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tggacgatga tattcaagtg tcggacaaac taaaagtcaa caaagcaaaa gtttactaaa 61 aaaattaaaa aaaaaaattt taaatttaaa gaaagcttgg aagaaaaaaa aagtcgggaa 121 aagaacaaaa ttttaaaaac atttacaatt ttcgggaaaa tttctaattt ttgttgaaag 181 tgcttataca cagtacttat gggaacttta tatgaatcat ttgccgttta catattttcc 241 catacgcata ttgaaagtat ttttagccag gcatgccaac gatgccaatg ggataaagcc 301 aaaatgtttt gagaaaaaaa ttttctaatt acgttttcta atctacaaac tgtataaatc 361 gcaaaaaata tttgttatca cgcggctttg aaaaaaaaaa cattaattaa aaaaaagaaa 421 acaataaagt aataaaaatt aaaaaaaaaa aaacgtttaa gaacattttt cacatacttt 481 ctcccaaaag aatttgagtt atcatttgaa aaaagaaaga aaaattgtgg gagcccagct 541 actttcctaa cagcgctctc tttctctctc tctctcttcg aaaaactttc taagaactca 601 agcaaaaatt ctcaaaaata aaacattgat tttttttcat tttccctgtg actaacacaa 661 ctcaatttaa tggtgccatc gcccaccccc atggccccct gacaattaga agaaaaaaaa 721 aacaccaaaa attaaacttc tgatgcctac aaaaaacaaa cgcggcagct agcctgtgta 781 tgatttttca tttgtctaag gcaacgtaat tttcgtcatc agccttacaa acgccacatt 841 gccgttgctg ttgttgttgt tgctacggtt gattgtctct tgtataggcc aagttctcag 901 tttcggtttt cccactgccg ccaactgcca ccatcaaaat tggcagtagt tgtggcagaa 961 ggtggccata gctgattagt gtgctattgg cgcaaataaa tagagataaa ctttcttcca 1021 tctccaatat actgagagtg tctatgtgat tatgccatac cattgaagca gcgaactgag 1081 taaaaattct ctgagcactc atacgggagg ataaacgaaa tcatctgcaa aatctcatcg 1141 aatctcttcg agtgaatcgt tcgaacatcg ttttgtgctt agattttggg gacttgagtg 1201 tttgacgtgg gaaaattgga aaaacagttt gttcatatct atcggggagc gttgttcgtt 1261 gttcgcctga tatttgtgaa tatttgcggc gaaataattt gtaaaatttg taatccgtcc 1321 atgccatgcg cgataaaata tcccaactat tttgcttgcc aaaaaacgca tgcaaacata 1381 attcaacaga taatagagga caaagtgtgc caaataaagc aacgctcaat ggggggacaa 1441 cgtgtaccaa cggttctatt gggccagaag ggcccgaagc gacagagacc gactcatcag 1501 ggaccggggg gatgcggaag tcgttggaga ggaagggctc agcgccgaac gacgctgttc 1561 acctccagag acgggtggga ctcttcagtg gggtggcttt aattgtcggg accatgatag 1621 ggtctggaat atttgtgtca ccttctggtc tactagctag aactggttcc gttggtgtaa 1681 gctttataat atggcttgcc tgtggtgtgc tctccctgat gggtgccctg gcatacgctg 1741 aattaggtac tatgaataca tcgtcgggtg ctgaatgggc atattttatg gacgcatatg 1801 gaccagcccc ggcgttccta ttctcatggg tatccactct agtcttaaag ccatcgcaaa 1861 tggcaataat ttgtctctca tttgcacagt acgccgtcga ggcatttgtc tccgaatgtg 1921 atccaccaat gtcggttgtt aaaatggttg cattagtagc aatagtgatg attttgtttg 1981 ttaactgtta tagtgttaat ttgggcatgg cggtccaaaa cgtattcacc gcagccaaac 2041 tggtagctgt cctcattgtc atatgcggcg gtgcctggaa actcatccag ggcaatactc 2101 agcatctggc aaatgcattt aatggaccca cacccaatgt gggagctgtg gccacagctt 2161 tctatacggg tctatgggcc tacgatggtt ggaacaatct caactatgtc accgaggaga 2221 ttaagaatcc cagcaagaat ttgcccaggt ccatagtgat tgcggcaatg tcacccaccg 2281 aaatggtaca atccgaggct gtcgcagtca cctttggcaa ccgtatattg ggcgtaatgg 2341 cctggttaat gcctttgagt gtaacggtca gtacatttgg cagtgccaat ggaacactgt 2401 ttgcagcggg aagattatgt tttgctgcct cacgcgaagg tcatttactg gatattctct 2461 catatgtcca tgtacgccgt ttgaccccag cccctggtct tatattccat tctctcattg 2521 ctgccgccat ggtcctctat ggcaccatag actcactgat tgatttcttc agtttcactg 2581 cttggatatt ctatggcggc tccatgttgg ccctcattgt gatgcgcttc accaaaccca 2641 actatccaag gccatataaa gtgcctatta tcattcccgt tgtggtcctg gtgatctcta 2701 tgtatctggt ggtggcaccc atcatcgatt caccccgcat tgagtatctc tacgcgttac 2761 tgttcatctt tgccggtttg attttctaca taccatttgt aaaacttgga atgacaccga 2821 gatttatgaa caaagtaaca ttattcctgc aattactatt ggaagttgta cccacctcca 2881 gcatggcatt attcgattga gagaccgcca ctacaaatga tgcccaaatt aaaacaccac 2941 aaacagacaa atgcaaatga aggcaaacgt ttttgttgaa acagacaaaa ggaaaatgtt 3001 tgaataataa agataaatag agagaaaact atataatagt ttttgacaca aatattctta 3061 aaggaaagca aaagaactat ttgaaaacca aacattcata tttagaaaag aattacaaaa 3121 aaataaaaaa taatatatat aaacaatatt taatgcaaca tatatatata cataaatacc 3181 aaacaacaac aaaatactat atattttgta gattttaaga taaaaccaat aaaaagaaaa 3241 aaacttaaaa aaatcttaaa aaaattgcaa aattttgaga aaaaaaccaa aacagttgct 3301 tttcaaaaag tggacgttgc aaaaaaaaaa acagaactca cacatacaag atataatttt 3361 taaatatttt taggctttgt tgtcaacacc caaaagaaat gagaaccaaa aaaataaaaa 3421 aggaacaaga attttacaaa gttttttata aatatttatt tggaaaaaga atttttattc 3481 aaccccacaa