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LOCUS XM_013243196 3541 bp mRNA linear INV 02-SEP-2023 (LOC106081313), transcript variant X1, mRNA. ACCESSION XM_013243196 VERSION XM_013243196.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013243196.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3541 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..3541 /gene="LOC106081313" /note="b(0,+)-type amino acid transporter 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins" /db_xref="GeneID:106081313" CDS 1326..2951 /gene="LOC106081313" /codon_start=1 /product="b(0,+)-type amino acid transporter 1 isoform X1" /protein_id="XP_013098650.1" /db_xref="GeneID:106081313" /translation="MRDKISQLFCLPKNACKHNSTDNRGQSVPNKATLNGGTTCTNGS IGPEGPEATETDSSGTGGMRKSLERKGSAPNDAVHLQRRVGLFSGVALIVGTMIGSGI FVSPSGLLARTGSVGVSFIIWLACGVLSLMGALAYAELGTMNTSSGAEWAYFMDAYGP APAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVSECDPPMSVVKMVALVAIVMILF VNCYSVNLGMAVQNVFTAAKLVAVLIVICGGAWKLIQGNTQHLANAFNGPTPNVGAVA TAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIVIGIPLVTLCYALINISYLAAMSP TEMVQSEAVAVTFGNRILGVMAWLMPLSVTVSTFGSANGTLFAAGRLCFAASREGHLL DILSYVHVRRLTPAPGLIFHSLIAAAMVLYGTIDSLIDFFSFTAWIFYGGSMLALIVM RFTKPNYPRPYKVPIIIPVVVLVISMYLVVAPIIDSPRIEYLYALLFIFAGLIFYIPF VKLGMTPRFMNKVTLFLQLLLEVVPTSSMALFD" misc_feature 1509..2921 /gene="LOC106081313" /note="L-type amino acid transporter; Region: 2A0308; TIGR00911" /db_xref="CDD:273332" polyA_site 3541 /gene="LOC106081313" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tggacgatga tattcaagtg tcggacaaac taaaagtcaa caaagcaaaa gtttactaaa 61 aaaattaaaa aaaaaaattt taaatttaaa gaaagcttgg aagaaaaaaa aagtcgggaa 121 aagaacaaaa ttttaaaaac atttacaatt ttcgggaaaa tttctaattt ttgttgaaag 181 tgcttataca cagtacttat gggaacttta tatgaatcat ttgccgttta catattttcc 241 catacgcata ttgaaagtat ttttagccag gcatgccaac gatgccaatg ggataaagcc 301 aaaatgtttt gagaaaaaaa ttttctaatt acgttttcta atctacaaac tgtataaatc 361 gcaaaaaata tttgttatca cgcggctttg aaaaaaaaaa cattaattaa aaaaaagaaa 421 acaataaagt aataaaaatt aaaaaaaaaa aaacgtttaa gaacattttt cacatacttt 481 ctcccaaaag aatttgagtt atcatttgaa aaaagaaaga aaaattgtgg gagcccagct 541 actttcctaa cagcgctctc tttctctctc tctctcttcg aaaaactttc taagaactca 601 agcaaaaatt ctcaaaaata aaacattgat tttttttcat tttccctgtg actaacacaa 661 ctcaatttaa tggtgccatc gcccaccccc atggccccct gacaattaga agaaaaaaaa 721 aacaccaaaa attaaacttc tgatgcctac aaaaaacaaa cgcggcagct agcctgtgta 781 tgatttttca tttgtctaag gcaacgtaat tttcgtcatc agccttacaa acgccacatt 841 gccgttgctg ttgttgttgt tgctacggtt gattgtctct tgtataggcc aagttctcag 901 tttcggtttt cccactgccg ccaactgcca ccatcaaaat tggcagtagt tgtggcagaa 961 ggtggccata gctgattagt gtgctattgg cgcaaataaa tagagataaa ctttcttcca 1021 tctccaatat actgagagtg tctatgtgat tatgccatac cattgaagca gcgaactgag 1081 taaaaattct ctgagcactc atacgggagg ataaacgaaa tcatctgcaa aatctcatcg 1141 aatctcttcg agtgaatcgt tcgaacatcg ttttgtgctt agattttggg gacttgagtg 1201 tttgacgtgg gaaaattgga aaaacagttt gttcatatct atcggggagc gttgttcgtt 1261 gttcgcctga tatttgtgaa tatttgcggc gaaataattt gtaaaatttg taatccgtcc 1321 atgccatgcg cgataaaata tcccaactat tttgcttgcc aaaaaacgca tgcaaacata 1381 attcaacaga taatagagga caaagtgtgc caaataaagc aacgctcaat ggggggacaa 1441 cgtgtaccaa cggttctatt gggccagaag ggcccgaagc gacagagacc gactcatcag 1501 ggaccggggg gatgcggaag tcgttggaga ggaagggctc agcgccgaac gacgctgttc 1561 acctccagag acgggtggga ctcttcagtg gggtggcttt aattgtcggg accatgatag 1621 ggtctggaat atttgtgtca ccttctggtc tactagctag aactggttcc gttggtgtaa 1681 gctttataat atggcttgcc tgtggtgtgc tctccctgat gggtgccctg gcatacgctg 1741 aattaggtac tatgaataca tcgtcgggtg ctgaatgggc atattttatg gacgcatatg 1801 gaccagcccc ggcgttccta ttctcatggg tatccactct agtcttaaag ccatcgcaaa 1861 tggcaataat ttgtctctca tttgcacagt acgccgtcga ggcatttgtc tccgaatgtg 1921 atccaccaat gtcggttgtt aaaatggttg cattagtagc aatagtgatg attttgtttg 1981 ttaactgtta tagtgttaat ttgggcatgg cggtccaaaa cgtattcacc gcagccaaac 2041 tggtagctgt cctcattgtc atatgcggcg gtgcctggaa actcatccag ggcaatactc 2101 agcatctggc aaatgcattt aatggaccca cacccaatgt gggagctgtg gccacagctt 2161 tctatacggg tctatgggcc tacgatggtt ggaacaatct caactatgtc accgaggaga 2221 ttaagaatcc cagcaagaat ttgcccaggt ccatagtgat tggtataccc ttggtaactt 2281 tgtgctatgc tctcatcaat atttcctatt tagcggcaat gtcacccacc gaaatggtac 2341 aatccgaggc tgtcgcagtc acctttggca accgtatatt gggcgtaatg gcctggttaa 2401 tgcctttgag tgtaacggtc agtacatttg gcagtgccaa tggaacactg tttgcagcgg 2461 gaagattatg ttttgctgcc tcacgcgaag gtcatttact ggatattctc tcatatgtcc 2521 atgtacgccg tttgacccca gcccctggtc ttatattcca ttctctcatt gctgccgcca 2581 tggtcctcta tggcaccata gactcactga ttgatttctt cagtttcact gcttggatat 2641 tctatggcgg ctccatgttg gccctcattg tgatgcgctt caccaaaccc aactatccaa 2701 ggccatataa agtgcctatt atcattcccg ttgtggtcct ggtgatctct atgtatctgg 2761 tggtggcacc catcatcgat tcaccccgca ttgagtatct ctacgcgtta ctgttcatct 2821 ttgccggttt gattttctac ataccatttg taaaacttgg aatgacaccg agatttatga 2881 acaaagtaac attattcctg caattactat tggaagttgt acccacctcc agcatggcat 2941 tattcgattg agagaccgcc actacaaatg atgcccaaat taaaacacca caaacagaca 3001 aatgcaaatg aaggcaaacg tttttgttga aacagacaaa aggaaaatgt ttgaataata 3061 aagataaata gagagaaaac tatataatag tttttgacac aaatattctt aaaggaaagc 3121 aaaagaacta tttgaaaacc aaacattcat atttagaaaa gaattacaaa aaaataaaaa 3181 ataatatata taaacaatat ttaatgcaac atatatatat acataaatac caaacaacaa 3241 caaaatacta tatattttgt agattttaag ataaaaccaa taaaaagaaa aaaacttaaa 3301 aaaatcttaa aaaaattgca aaattttgag aaaaaaacca aaacagttgc ttttcaaaaa 3361 gtggacgttg caaaaaaaaa aacagaactc acacatacaa gatataattt ttaaatattt 3421 ttaggctttg ttgtcaacac ccaaaagaaa tgagaaccaa aaaaataaaa aaggaacaag 3481 aattttacaa agttttttat aaatatttat ttggaaaaag aatttttatt caaccccaca 3541 a