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LOCUS XM_013242878 6486 bp mRNA linear INV 02-SEP-2023 transcript variant X4, mRNA. ACCESSION XM_013242878 VERSION XM_013242878.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013242878.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6486 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..6486 /gene="LOC106081128" /note="protein sprint; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:106081128" CDS 764..5407 /gene="LOC106081128" /codon_start=1 /product="protein sprint isoform X4" /protein_id="XP_013098332.2" /db_xref="GeneID:106081128" /translation="MEFFKVMMTTTSMGRNFFEKLFHFRSSDSTLTASASQTASTTVG PNNQLKSNSSNSTATTPTTNNNNNNVSSSNSSGGGLNSHQRLPFCGLDSIKGSDNNGS DGSMGGNGSVVGGVGAATISCGGKSNLSFDLNLQNGSKGSHGLSSAAGHIMPLVTDNG SEQFHSLDATDSCGDGQFEDDMQALLPKCSRLSRDELSQSRTSLVSSSDGGILAEGET SSETSRGSDDSPPCDLGLVERLLLTHPMWFLPGIQRSGAVHFLQGKEEGNFIVRGSSQ PNTMAVSVRLPPDTGPYIEHYLIQSNDGILCLESSRFKFDSIPSLIAHYAQCCDELPV QLVLPRALREVKNRQQLSSLALLGQEFWRYPMSCPKSTDQEATFLDAKSPNSITETSG IGTTIFSNSGGSSSATGVMQNGKVFSPISNATGIFSQAGTPSDTNSSMSSFTTSGGQN MQLMSPESVDSVILTMSPVDINNQRNGILGLGQSSADNFKTSCNNLSTFKSNAIQNAP QNNFKNSTKNIMEQEIRTQRPKPPNTLNLDLRKAAPAPPMRWSKPLSPNSPQPPTDIN GLNAANNFTVTTTVTFSVDNASTPQFVEVTTPAANNALTSVINSNTTFQTFSKRLSPE GECKDTMSSQGSSGGSRWQSHSSKDSNSSQRKAPSPSTPTNALSTGGGKPRKSKTRKE SKHYQESDILESPEIYCRSTLHDKISDYEDLWSHDPSDRTGLLTSFKPPPDGQQGKRP DLLAETPPITSSSNTSATTPAVTTCPPLPHTADSLTMMSSETTSDTQQLLKFSEDSIP RSRAGLILPGLMTQSLSEDQVFKSEATEGDTTPTQTPVSRSKQGSPFYAEPADALKQA GLATASILRRSQRGPLLPANHRHSEPPKGGFVRTPMCPMLVPAEIEKIAGSLDELKKK QQQQSQAQPQQQPSKRARGRFEQWQLDSSWEFMAKGDHNEGEYGDYDSAEHWKEPTTG DNPNKENSLNREANKENKQKPLTIHQIIAKRHPDLNLPELVRCSTPPQQNQQAVANKN LNELNGSQKSFELSQNNTCRLSSYDNVERNYPLSQCFFNGMDSAQSDDGTVFSEPWDS SQWDSFLPHDDTTLNSDTIHLSKCRPALSEDDTIIEELSTKELNSQDTLKPKKTGGKH ATILRNPSIRDREILCHPRNKINLYNGGPGDTVRDYTLLLASDQCTTFARNIENFISC TKESREAAPQVVMRNMRQFMNGMKNYLVKHGEGKFHQEVESARSRLKSDEFLNLDAIL ETVMHQLVVLPLREHLYGMFVDYYTRSEDIQLLAQNVKYACGRAANDFGIRSSVTPPS SNSLQIISNLLLRLQEAELPLEKLELFLCVISTIFDATGCPRGQQLGADDFLPILVYV VAKCGFVGAEIEAEFMWGLLQPTLLNGEPGYYLTALCSAVHVLKSFMASENESGTGSL DWRSSSLPACSSVLRVIIPDECNGSLQTRTLPVRPHTTTREVCRIIAHKARITNPQDY ALFKLVDGEETPLNDNECPQDIRLAAKGKHCMLAYKRIDAKIAWPTATQPNFN" ORIGIN 1 tgatttagtc gccgaaaaac tttcaaaccg aacgaatgcg tgcaacaacg ttgttgtagt 61 cgccgctgcc gccttgtttt gttcagttgc tgctttacga aaacacaaag aagaagaata 121 agaatagaat agcaaagacg ggctagaatc aaaacaaaac aaaaacgggc aataagaaga 181 agaatctgaa tctcattaac aacgaagagc acaagacgga caaaccgaac cggtagcaaa 241 agtaattcgc aagtgacgcg cgatcgtatc gttaatgttt ctgtgtgttt gatatatgtg 301 tgtatgcgag tatgtgttat agttgttggt gtaattcctg taatcataaa atgttaatct 361 caaattgttg tcgtatgcat gacgatcgag gagtcccact cacatatggg tcgccgtgcc 421 aaagtcccaa aaaaatcgca acaatgaatc atcagcaaaa ttacagcgaa atgctgacgc 481 cttgagagaa gtgtgcgaca cgaaccaacc tttgacaacg gtactttaaa agggagccta 541 atgggtgtga gcccttatgg tagccttttc gttgttgctc gcctaagaac atcgctttag 601 tagtgttgta tacgttcata attgattgcc atattcaatg aaaaccaatc atcgaaaaga 661 atttaatgcg ttttacacaa caatgtaatt ggttgctgct acctttgtga attttcaaaa 721 atttcatcaa caaaaattgc gaataataca gctgctaatt tttatggaat tttttaaagt 781 aatgatgaca acaaccagca tgggacgaaa tttcttcgaa aaattattcc attttcgatc 841 ctctgactcc acattaacag cgtcagcatc acagacggct tcgacaacag tggggccgaa 901 taatcaatta aaatcaaatt catccaactc aacagcaacg acgccaacta caaacaacaa 961 caacaacaat gtaagctcta gcaacagtag tggcggcggc ttaaacagcc atcaacgtct 1021 accattttgt ggtttagatt ccattaaagg aagtgacaat aatggtagcg atggctctat 1081 gggtggcaat ggaagtgttg ttggtggtgt tggtgccgcc accatttcct gtggcggcaa 1141 aagcaatttg agttttgatc tgaatctgca gaatggcagc aagggctcac atggcctttc 1201 gtctgctgct ggtcacataa tgcccctggt gacggacaat ggttcggaac aatttcattc 1261 actcgatgcc accgatagct gtggcgatgg acaattcgaa gatgacatgc aagcattgct 1321 gccaaaatgt tctcggctat ccagagatga attaagtcag tcccgtacat ctcttgtctc 1381 cagttcagat ggtggcattt tggccgaggg tgaaacatcg agtgaaactt cccgtggttc 1441 tgatgattcg ccaccctgtg acttgggtct ggtggagcgt ttgctgttga cacatccaat 1501 gtggtttttg cctggcatac agcgttctgg agccgttcac tttctgcaag gaaaagaaga 1561 ggggaacttt attgttcgtg gttcaagtca acccaatacc atggccgttt cggtgcgtct 1621 acctcccgat acaggaccat atatcgaaca ttatcttata cagtcaaatg acggcatact 1681 ttgcctggaa agttctcgct tcaaatttga ttcgatacct tccttgatag ctcactatgc 1741 ccagtgttgt gatgaattgc ccgtacagtt ggtattgccg cgggccctca gagaggttaa 1801 aaatcgtcag cagctttcat cgttggctct gctgggtcag gaattctggc gttatcccat 1861 gtcctgcccg aagagcacag atcaagaggc tacttttctc gatgctaaat cgcccaactc 1921 cataacggaa accagtggaa ttggcaccac aatcttcagc aattcgggag gcagtagcag 1981 cgctactggg gtcatgcaaa atggcaaagt cttcagtccc atcagcaatg ccaccggcat 2041 tttcagtcaa gccggtactc cctcggatac caactccagt atgagttctt tcaccaccag 2101 tggtggtcaa aacatgcagc tgatgagtcc cgaatctgtt gattcggtta tacttactat 2161 gtctccagtg gatatcaata atcaacgaaa tggcattttg ggcttgggtc aaagctcagc 2221 ggacaatttt aagacatcct gcaataattt gtccaccttc aaatcgaatg ccatacaaaa 2281 tgcccctcaa aataatttca agaattcaac caagaatatc atggaacaag agatacgaac 2341 ccaaaggccc aagcctccaa ataccttgaa tttggatttg cgtaaggcag caccagctcc 2401 gcccatgcgc tggtcgaaac ccttatcgcc caatagtccc caacctccta ccgacatcaa 2461 tggtctcaat gctgccaata attttactgt taccaccaca gtaacattct ccgtggataa 2521 tgcctccaca ccgcaatttg tggaggtaac cacaccagct gccaacaatg ctttgacatc 2581 tgtcattaac tccaatacaa cgttccagac attttcgaaa cgtttgtctc ccgagggaga 2641 atgcaaagac accatgtcct cccaaggctc ttcggggggt agcagatggc agtcgcacag 2701 cagcaaagac tcgaatagca gccaacgcaa agctccttcg cccagcaccc ccacaaatgc 2761 tttgtccact ggtggtggta aaccccgcaa atccaagact cgcaaagagt ccaaacatta 2821 ccaagaatcg gatatcttgg agagcccgga aatctattgc cgcagcactt tacatgacaa 2881 gatcagcgat tatgaggact tgtggtcaca tgatcccagt gatagaaccg gtttgttaac 2941 cagcttcaag ccaccacctg atggccagca gggaaagcga cccgatttgt tagcggaaac 3001 acctccaatt acctcttcct cgaatacatc tgcaacaacg cctgccgtta caacttgccc 3061 gcctttacca cacactgccg actcgcttac catgatgtcg tccgaaacga cctcagatac 3121 ccaacaactg ttgaaattct ctgaagactc catacctcgc tcgcgtgctg gtcttatctt 3181 gcctggtctc atgacccaat ccttatccga agatcaagtt ttcaagtccg aagccacaga 3241 gggtgatacg acacccaccc aaactcctgt gtcacgcagc aaacagggca gcccattcta 3301 tgcggaacct gctgatgccc ttaaacaggc tggactggcc actgccagca ttttaagacg 3361 ttcccagcgc ggacccttgt tgccagcaaa tcatcgccac tcagagccac caaaaggtgg 3421 ttttgttcgc actcccatgt gcccaatgtt ggtgccagct gaaattgaga agatcgccgg 3481 tagcctagat gaattgaaga aaaaacaaca gcaacagtca caggcccaac cgcagcaaca 3541 accctccaag agggctcgcg gccgtttcga acaatggcaa ttggatagca gttgggagtt 3601 catggccaaa ggcgatcaca acgagggaga gtatggtgat tatgattctg ccgagcattg 3661 gaaggagcca accacaggcg ataatccgaa caaggaaaac tccctaaatc gtgaggcaaa 3721 caaagagaat aaacaaaaac ctttgaccat ccatcagatc attgccaaaa gacatcccga 3781 cctaaacctg cccgaattag taagatgctc cactccgcca caacagaatc agcaagctgt 3841 agccaataaa aatctcaacg aattgaatgg cagccaaaaa tcgtttgaat tgtcacaaaa 3901 caacacttgc cggctctcgt cctatgacaa tgtggagcgc aattatccac tcagtcaatg 3961 ctttttcaat ggcatggatt cagctcaatc ggatgacggc acggtattct ccgaaccctg 4021 ggattcatct cagtgggatt catttttgcc acatgatgat accaccctaa attcagatac 4081 tatacacttg tcaaagtgtc gaccagccct ctctgaagat gacaccatca ttgaagagct 4141 ctccaccaaa gaactaaaca gtcaagacac attgaaaccg aaaaagacag gtggcaagca 4201 tgccactatt ctacgtaatc ccagtatacg agatcgagaa attctatgtc acccacgcaa 4261 caaaattaat ctgtacaatg gtggaccggg cgacactgtg cgagactaca ctctactttt 4321 ggcctcggac cagtgcacta cctttgcccg caatattgag aatttcatat cgtgcaccaa 4381 ggaatcccga gaggcggcac cccaagtagt catgcgcaac atgcgtcaat tcatgaacgg 4441 catgaaaaac tatttggtca aacatggcga aggcaaattc caccaggagg tcgaatcggc 4501 tcgctctcgc ctcaaatctg atgaattttt gaatctagat gccattttgg aaactgtgat 4561 gcatcaattg gttgtgctac ccctaagaga acatttgtat ggcatgtttg tggactacta 4621 caccagatcg gaggacatac agctattggc gcaaaatgtc aaatacgctt gtggtcgggc 4681 agccaatgat tttggcatac gatcctctgt cactccgccc tcatccaatt ccttgcaaat 4741 tatatcaaat ctgttgttgc gcctgcaaga ggctgaattg ccattagaga aactagaact 4801 attcttgtgt gttatatcca ccatatttga tgccaccggc tgtccccgag gccagcaatt 4861 gggtgccgat gactttttgc ccatattggt gtatgtggtg gccaagtgtg gttttgtggg 4921 agccgaaatt gaggctgagt tcatgtgggg tctattgcag ccgactcttt tgaatgggga 4981 gcctggctat tatttgaccg ccctttgtag tgcggttcat gttttgaaaa gcttcatggc 5041 atcggagaat gaaagtggca ctggttcctt ggattggcgt tcttcatccc ttcccgcctg 5101 ttcttcagtg ctgagggtaa tcatacccga tgaatgcaat ggctctctgc agacccgcac 5161 cctacccgta agaccccata caacaacgcg tgaagtttgc cgcatcattg cccacaaagc 5221 ccgcattacg aacccccagg actatgctct cttcaagttg gtcgatggcg aggagacccc 5281 gctcaatgac aacgagtgtc cccaagacat acgactggct gccaaaggca aacactgcat 5341 gttggcctac aagcgcatcg atgccaaaat agcctggccc acagctaccc agccaaattt 5401 taattagaca ctttcaatcg attccagcat tgaaacatga cttaattatt tataaaaaaa 5461 aaaacaacca attcccttct acaatttttg aatatgttta agccttaaac atttgctcaa 5521 actaattaac aaatttacga tgtgcataag cgctcccaag tttttttatc ttataagtct 5581 aatttaagga tgtactaaaa acagtattta aaataagttt tgttttttaa gcaacagaca 5641 tgaacgttat gtgctaatag aatttgaaag tttaccaact ttcgccgaat aaaatgcaaa 5701 taatacgttt gaaatgtata aaagagagag agagaaaaag aaaacacaat catttcggaa 5761 ggaaccataa aatagtgtac gagtatggtt ggataaacag agaagcttgt aaattttttg 5821 aataagcata atttaaaaaa gataacaatt taaaaattat aaatacaata tcattaatat 5881 ttaaaaaata ttaaaaaaaa acaaacaaac aaacacacac acacatccaa aaataaaaga 5941 ataaactttt tatccctttt tccaatcagt tgtgtagttg aacatattac ggaacatttt 6001 cggtttcacc caaacactct taagtgcaat aagcgaaccc tgtttcaact tgttgggttc 6061 aagggtattc aagttggact cttcaagtcc ttgcttgttg cgttcccctt gctattgttc 6121 tgcatcattt gtctatcctt ttgccaattg ttttaactat acatacctac ttatatatat 6181 atatatagca tacattcttc ctcttcttag tatttataat atagaatttg ttttattttt 6241 cttttttgat atgtattgaa tacattttaa tctttaatga attaataaat cgtaattatt 6301 tatcggccca catttgtgta catttcaaca aaattcacat tcaaatcatt gctccgtatt 6361 aatctattca tcgatcatta ataatcatta acatttaatc gaataataat ttaatcgttt 6421 agaattaaat ctacttttgt cttacaaaag cacacaacaa caacaacaac aacaaccccc 6481 cccccc