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LOCUS XM_013242650 2563 bp mRNA linear INV 02-SEP-2023 class A (LOC106080991), mRNA. ACCESSION XM_013242650 VERSION XM_013242650.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013242650.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2563 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2563 /gene="LOC106080991" /note="tetracycline resistance protein, class A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins" /db_xref="GeneID:106080991" CDS 601..2340 /gene="LOC106080991" /codon_start=1 /product="tetracycline resistance protein, class A" /protein_id="XP_013098104.1" /db_xref="GeneID:106080991" /translation="MVASNEPSKAVINSNPKTEKTKVPLTWREKMQKVIANITVEPIV AAYIMPSVLSNLATQNLNLEKACRVNMEYGEEICDALTRRETANYTMEEETIQKMVAH MVAWKTVIQSLFPCLLILFWGSWSDRHHRRKPCIMIPIVGEFLGTVGLILCVYFKDTP MEVAGLTEAIFPSLSGGWFVMLMGVFSYIADITTEEERTLRIGILNVCFSVGVPIGTA LSGVLLKKIGFYGVFSISASLYVLSLVYGFFFLPEPRPRCIQPQEKTKSRSLLGDFFD KEHVVETFRVAFKKGENKRRARVILLMIVVMVVIGPIYGEMNVMYLFTRYRFNWNEVD FSVFNTFAVVTGLVGVLFCVGVLSHKLKIDDALIGVLSSTSKILSGFVYAFATLPWHM YVGAIVEIFNGTSFIAMRSMATKLVSKDELGKVNSLFGVAEALMPVVYAPMYSTLYAA TIKVFPGAFYILGAAITVLAVIIFLWMYDFQRKQLRKQKSLDAEASKSVKEPTISTID AMALASEAKGHLNGIVSNVLHEHICDLSCRPNGSTTCLNGNAVIGNGYDNKAYMPDLV EGADTKSEHNTHL" misc_feature 709..2034 /gene="LOC106080991" /note="Solute carrier 46 (SLC46) family of the Major Facilitator Superfamily of transporters; Region: MFS_SLC46; cd17386" /db_xref="CDD:340944" misc_feature order(739..744,751..756,763..765,955..957,1126..1131, 1135..1143,1150..1152,1216..1218,1225..1230,1237..1239, 1516..1518,1525..1530,1537..1545,1552..1554,1636..1638, 1648..1650,1801..1806,1816..1818,1828..1830,1876..1878, 1885..1890,1897..1902,1909..1911) /gene="LOC106080991" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340944" polyA_site 2563 /gene="LOC106080991" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gccgacatca acagttgatc tttggtctac gattccatag agacaaccgt aaacgaagcg 61 tcgaaatcaa attcaaaaaa acaaagtgaa ataataaaaa tctaacgaaa acgaaaatca 121 aaaaaagttg aaaaaaaaaa ttacaaaaaa aaatacacaa ctcattgttg tgtagctgaa 181 acagtgtagc aagcttagag tagtgttttt tcggtagtga gtgagcgagt gatatcagtc 241 ggcaattgtc atgcaattgc acggagaaat caaaagatca caaactatat aaacaaacca 301 accacaagca acaaaaaaat accaacaaaa attgaaaaac aaagggagaa aataaaaaca 361 acaaagggag aaaaatagat aagaaaagct tataaattat acaccactat tcagatgtca 421 tgcaacttta aacaaaacca aatgaaaatt tttgttgttg taaaaagtga aaattcattt 481 tgaaataatc ctccgcgtca atcgatagaa atctcacaac aacttcaact ccagcatcca 541 gagcagcagc taattattta attaataatt caaacaagaa gtagaccaat tccttaaaaa 601 atggtggcct ccaatgagcc gtccaaagct gtcattaact caaatccgaa aacagagaag 661 accaaagtcc ccctaacatg gcgagaaaaa atgcaaaaag tcatagccaa tataacggtg 721 gaacccattg ttgcggctta cattatgcca agtgtattgt ccaatttggc cacacagaat 781 ttaaatttgg aaaaggcatg tcgggttaat atggaatatg gtgaagaaat ctgtgatgca 841 ctgacaagaa gagaaacagc caattatacc atggaggagg aaactataca gaaaatggtt 901 gcccacatgg tggcctggaa aactgtgata caatccctgt tcccctgttt gttgatatta 961 ttttggggct cttggagtga tcgccatcat aggcggaaac cttgcattat gatacccatt 1021 gtgggagagt ttttgggcac agtgggcctt atactctgtg tttactttaa ggacacaccc 1081 atggaggtgg caggccttac agaggccatc tttccctctt tgagtggggg atggtttgtc 1141 atgcttatgg gtgtcttcag ttatatagcg gatataacta ccgaggagga acgcacgctg 1201 cgcataggca tcttgaatgt gtgtttctcg gtgggggtgc ccattggcac tgccttgagc 1261 ggggtattat tgaagaaaat cggcttctat ggtgtcttct ccatttcggc cagcttatat 1321 gtcttatctt tggtttatgg tttcttcttt ttgcccgagc cccgccccag atgcatacaa 1381 ccccaagaga aaaccaaatc ccgcagtctt ttgggagact ttttcgacaa ggaacatgtg 1441 gtggagactt tccgtgtggc ctttaaaaaa ggcgaaaata agcgaagagc tcgtgttatt 1501 ttgctgatga ttgtcgttat ggttgtcatt ggtcccattt atggtgaaat gaatgtcatg 1561 tatctcttca ctcgctatcg tttcaattgg aatgaagttg attttagtgt tttcaatact 1621 tttgctgtgg ttacaggatt ggtgggtgtc ctcttctgtg ttggtgtcct ttcgcacaaa 1681 ttgaaaatcg atgatgccct cattggagtt ctttcaagta cctcaaaaat cttatcagga 1741 tttgtttatg cctttgccac actgccatgg cacatgtatg tgggagcaat tgtggaaata 1801 ttcaatggga catcattcat tgccatgcgt tctatggcca ccaaattggt gtctaaagat 1861 gaattgggta aagtcaattc gctctttgga gtggctgaag ctttaatgcc ggtggtatat 1921 gcacccatgt atagcacact gtatgcggca acaattaaag tattccctgg ggccttttat 1981 atacttggtg ctgccatcac tgtgttggca gtgataatat ttttatggat gtacgatttc 2041 caacgcaaac aattgcgcaa gcaaaaatcc ttggatgccg aagcctccaa gagtgtcaaa 2101 gagcctacta tcagcaccat tgatgccatg gccttggcct cagaggccaa gggtcatttg 2161 aatggcattg ttagcaatgt cctacatgaa cacatctgtg atctcagttg tcgacctaat 2221 ggcagtacca cttgtctgaa tggcaatgct gtcattggca atggttatga caacaaagcc 2281 tatatgcccg atttggtgga gggcgccgat accaaatcag aacacaatac gcatttataa 2341 gaaaaaaaaa gaaaaatagt ttttaagtta tatattagag gagtaagaaa acatttcccc 2401 aataatgtcc aaggataaat aaaccacaaa ccttacctaa ggtgtaaaat ttagtattgt 2461 ttaaaaattt taacctaggg taggttcgga ttgttgtaat ctgcaatgtg attgaataaa 2521 ttgttacctc gaagcaataa tcataagaaa gtttttatgt aaa