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PREDICTED: Stomoxys calcitrans basic-leucine zipper transcription


LOCUS       XM_013242487            5443 bp    mRNA    linear   INV 02-SEP-2023
            factor A (LOC106080881), transcript variant X1, mRNA.
ACCESSION   XM_013242487
VERSION     XM_013242487.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013242487.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5443
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..5443
                     /gene="LOC106080881"
                     /note="basic-leucine zipper transcription factor A;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:106080881"
     CDS             829..5127
                     /gene="LOC106080881"
                     /codon_start=1
                     /product="basic-leucine zipper transcription factor A"
                     /protein_id="XP_013097941.2"
                     /db_xref="GeneID:106080881"
                     /translation="MCDINCIWLFNLLVAFVLIIQQQQHNVVVVADATTNSLKDHHLQ
                     QQRHLQALPHGSKQQRSAYADITSYASASAAKYLHQHSLPKANVVKREIRNDKNTDFI
                     SYLSDFNMQDETSIPEDIFDQRYLKEIEERERNGVGVGSVTTAAESDGVEGVDVIDVN
                     LPYDDSDADAEADIILESQRSSERNFSSNDDNISKNNANDGFDDGTRPGIVYMAEVKP
                     QQDVGVKTADTSMKTSYSKKDTTFKEKKKMNFNFGSDKPKQRGLSQANDETSSPRFTY
                     DFQAQDFLKDSWGQDNYEDELDDDEEDDDDGSAEYERFKCLREQKQREVQQQKEREEQ
                     QRILQQQQQELLRQQQQQQQKAQQLYSIKKLKERKFNKASLSELEKFTPEEQDDHDSN
                     AAADDDDDEQLNEENLDDNAAGQDKNANVNNNDDNDDDETKIVYDKPSSQQLQQQPGP
                     IQDAIGDIADEVNEEKQNSFQVSNVEKKDFSNLFIPHKMKRHNGAARLDDATNRHTRI
                     RQQKLQQSSSSSSSSSHHFGRPTTNSKEDNARMDDIYNQEEYMPHIPTKEINYPKSYY
                     GNENGNASQNSEGQHNQQQPKQFKDSNSQTSSDIEMKEQYSSHKESETLMAVTTAAPS
                     SSTVANHEAEYRRQSLFEREKSLRRNSKRYGHKTHKKKYKDYLHYSSVMMMRQSPPTP
                     SAREATEATAATNTTSYAGMEKTTSAPAASTKLIKMDENNKHRNDNAEDNLRYHKDKY
                     AKKLKMEKLRGAVVPPSPIFVIKPSSRGPPMMAGVTSKPFYEGQINYYLETEDDDDAL
                     MGGRGNEARFITKGDRMDTNDWYRKLSPVLRNGVKTSSSSGTNQEDRPTPMGAMTRPA
                     HNDSRGSALQGTPGYTPYHHLRSHHQRHHQHHQQHTHGHQHHQHSRNHAYQRKMLPKK
                     PLMLSTTPQPPPARKHDPSAAVAADNVHSHMQELGHQITDLKEFERYYAKWPHLARVQ
                     SQLHDEQLREQLELQNLQQQQLGQYQDYEYDEDYFEALQGMSAAPNAREANSEENLPP
                     YIRKYNRRNKQLLDLLEGTLPPPTTRPPPQLRWSGSKVQPGSRDTSNVGSMSVRIDDD
                     YLKEKRKRYHQRQKQIHDLFEQQRGTTTTMAPTPYAYDGNSKDSQKGSSSGNNNDAQM
                     ANHLPDEDVSISLETQEEHTNEPNRNWQKEIATKSTKSASSLSPSSSSNTGNLPIHWQ
                     MEKIITPSPKSATGVDMASANNVATPKPAIFKLPSYPSIAGSFMQRPRSRSAQFAPSS
                     GSEFRRVTPNLYGANGNNNFINAGGYVAYNGHNKAAKSMASRFSGNEEKRTTALPPSS
                     AMVVSDTNDTSKSKNNQGASAAASSASSTSSRSSKSSASSSSSSSSSSPASVSNSFVY
                     HRVVDASPRLVGAGLTGRKQRLPFVAITDRRLETSKKSLTDHQKDFEQNHYPLP"
ORIGIN      
        1 ggttaacgtc tggtcgtcga ttttggaaaa caaccatcaa cgaatggatt attgaaaaat
       61 aaatccactt taaaggatat taaagaaata aaaagagtgc tatttaaatt ctatgatttg
      121 aatcaaagaa aaaaaagttt acggaaaaac tttaaacaaa aatgtgaaaa atttttcaaa
      181 ctaatcaata gcaagtccta gcaaaaggag aatttggcca aataaaattt caatttacga
      241 taatcgctac ataaatattt gtgaaatgtt caaaccatag agtgaagcta taaagcaaaa
      301 agaaaaagaa aaatactaaa aaaacaataa caaaaagaaa attcaacaaa cagacacaaa
      361 ggcttttatc aaagctcaca tttatcattc gcagtgcttt gtatttctgc gaagacccaa
      421 cgcatggagc ataaggtctt aaatcgcatt aagcaataaa ttttaattta aatcaaacgt
      481 gtgttactgt cattcgtatt gacttggcat tgcctacctt tgcaaggcaa cagaagccgc
      541 cgcatacaca cacagacaca ttttaatgcc tcaagcaatt cagtgtgaaa ttgtgagttg
      601 tgaaaaacgc ggggaaagca gtaaataaaa gacaaaaaaa aactacgccg tggcgtattg
      661 tgacagtgaa aatttaaaac aaaaaataat acccacacac tctctcacac atacccactt
      721 atgtaggcaa acatatacgc ttgacatcgt agtattgcat atctgtcaat atacgaaaag
      781 taaattttaa aattttctga acgtggcgtc attactgtga aatggacaat gtgtgacatt
      841 aactgcatat ggttatttaa tctacttgtg gcgtttgttt taattataca acagcaacaa
      901 cacaatgttg tagttgttgc tgatgccacc accaacagcc ttaaggatca ccaccttcag
      961 cagcaaaggc atttgcaggc gctgccgcat ggcagcaaac agcagaggtc agcgtatgct
     1021 gacattacat catacgcctc agcatcggcc gcaaaatact tacatcaaca ttcattaccc
     1081 aaagcgaatg tggtaaaacg tgagattcgc aatgacaaga atacggattt tatttcatat
     1141 ttaagtgatt tcaatatgca agatgaaacc tcaatacctg aggatatttt tgaccaaaga
     1201 tatctgaaag aaattgaaga gcgggaacgt aatggggtgg gtgtaggcag tgttaccaca
     1261 gctgctgaaa gtgatggggt ggaaggtgtc gatgttattg atgtcaattt accctatgac
     1321 gattcggatg cagatgctga agctgacata attctggaat cacaaaggtc cagtgaaaga
     1381 aatttcagct cgaatgatga caacatttcc aaaaacaatg ctaacgatgg ctttgatgac
     1441 ggcacgcggc caggcattgt ttatatggct gaggtgaaac cccaacaaga tgttggggtt
     1501 aaaacagcgg acacttccat gaaaacttca tacagcaaaa aagatacgac gtttaaggaa
     1561 aagaaaaaga tgaactttaa ctttggcagt gataagccaa agcagagagg cctttctcaa
     1621 gccaacgatg aaacgagttc gccacgcttc acgtatgatt ttcaagcaca ggatttctta
     1681 aaggattcat ggggccagga caattacgaa gatgagttgg atgatgatga ggaagacgat
     1741 gatgatggta gtgctgaata tgaacgtttc aaatgcttgc gggagcagaa gcaaagggag
     1801 gtccaacaac aaaaggaacg tgaggaacag cagaggatac tgcagcaaca gcagcaggag
     1861 ttattgcgcc agcaacaaca acaacaacaa aaagcacagc agctgtattc aataaaaaag
     1921 ttaaaggaaa gaaaatttaa taaggcatcg ttgagtgagc ttgaaaagtt taccccagag
     1981 gagcaggatg accatgacag caatgctgct gctgatgatg atgatgatga gcagcttaat
     2041 gaagaaaatc ttgatgacaa tgcggcaggg caagataaga atgcgaatgt gaacaacaat
     2101 gatgataatg atgatgacga aaccaaaatt gtttacgata aaccatcctc acagcagctc
     2161 caacagcaac cgggacccat tcaggatgct atcggtgaca ttgcagatga ggtcaatgag
     2221 gaaaaacaaa attcctttca agtgagcaat gtggagaaaa aggatttttc aaatttgttc
     2281 ataccacaca agatgaaacg tcataatggt gcagcacgtt tggatgatgc caccaatcgt
     2341 catactcgca taagacagca aaagttgcag caatcatcgt catcgtcatc atcctcatca
     2401 catcattttg gaagaccaac tactaactca aaggaggata atgcaagaat ggacgatatc
     2461 tacaatcaag aggaatatat gcctcacata ccaacaaagg aaatcaatta cccaaaatcc
     2521 tattacggca atgagaatgg aaatgcttcc caaaattcag aaggacaaca taaccaacaa
     2581 caaccaaagc agtttaagga cagcaatagc caaacgagca gtgacattga aatgaaggaa
     2641 caatacagca gccacaagga gagcgaaacg ttgatggcag tgacaacagc agcaccgtcg
     2701 tcgtctacgg ttgctaacca tgaagcagag tatagaagac aatcgctatt cgaaagggag
     2761 aaatcgctga gacgcaatag caaacgttat ggccataaaa cccataaaaa gaaatacaag
     2821 gattatctgc actactcgtc ggtcatgatg atgagacaat cgccgccaac accatcagcc
     2881 cgagaagcaa cagaggcaac agcagctacc aacacaacaa gttatgctgg aatggagaag
     2941 acaacatctg caccagcagc ctccacaaaa ctcataaaaa tggatgaaaa taacaaacat
     3001 cgcaatgata atgctgagga taatttacgt taccacaagg ataagtatgc caagaaatta
     3061 aagatggaga agttaagagg tgcagttgta ccaccctcac ccatttttgt gattaagcct
     3121 tcgtcgaggg ggccccccat gatggccggg gtcaccagca aacctttcta tgagggacaa
     3181 atcaattact atttggaaac tgaagatgat gatgatgctc ttatgggcgg ccgaggcaat
     3241 gaggcacgtt tcataaccaa aggtgatcgc atggacacca acgattggta tcgcaaacta
     3301 agtccggtgc taaggaatgg tgtgaaaacc tccagcagca gcggcaccaa tcaagaggat
     3361 cgacctaccc ccatgggggc catgaccaga ccagcccata atgatagtag aggcagtgca
     3421 ttacagggaa cgcctggcta tacaccatat catcacttaa gaagccatca tcaacgtcac
     3481 caccaacacc accagcaaca tacacatggc caccaacatc atcaacattc ccgcaatcat
     3541 gcctatcaac gtaaaatgtt acccaaaaag cctttaatgc tgtccaccac accccagcct
     3601 ccacctgcaa ggaaacatga cccctctgca gcagttgcgg cagacaatgt acacagtcac
     3661 atgcaggagc tgggccatca aatcaccgac ctcaaagagt tcgaacgcta ttatgccaag
     3721 tggccacatt tggcccgagt ccaatcccaa ttgcacgatg aacaactccg ggaacaattg
     3781 gaattacaaa atttacaaca acaacaatta gggcaatatc aggactatga atatgatgag
     3841 gactactttg aggcattgca gggcatgtca gcggcaccca atgccaggga ggctaattcc
     3901 gaggagaatt tgcctccgta cataagaaaa tataatcggc gcaataaaca attgctggat
     3961 ttgttggagg gtaccctgcc accacccacc actcggcctc cgccacagct gaggtggtca
     4021 ggctcaaagg tacagccggg ttcacgtgac accagcaatg tgggcagtat gtcggtgcgc
     4081 atcgatgatg actatttgaa ggagaaacgt aaacgctatc atcaaagaca aaaacagata
     4141 cacgatttgt ttgaacagca aaggggcaca acgacaacaa tggcacccac tccctatgcc
     4201 tatgatggca atagcaagga tagccaaaaa ggcagcagca gcggtaacaa caatgatgcc
     4261 caaatggcaa atcatttgcc tgatgaagat gttagcattt cgttggagac ccaagaagaa
     4321 cacacaaacg aacccaatcg aaattggcaa aaggaaattg caactaaatc aacgaaatct
     4381 gcatcgtcct tgtcgccatc gtcatcatca aataccggaa atttaccaat tcactggcaa
     4441 atggagaaaa taataacacc ctcgcccaag agcgcaacgg gagtggatat ggcctcggcc
     4501 aataatgtgg caacacccaa gccggccata ttcaaattgc cctcatatcc ttcgatagcg
     4561 ggcagcttca tgcaaaggcc tcgttcgcgt agtgctcaat ttgccccaag ttcgggatcg
     4621 gagtttcggc gtgtcacccc caatctgtat ggggccaatg gcaataataa tttcataaat
     4681 gctggtggtt atgtggccta taatggccat aataaggcgg ccaaatccat ggcatcgaga
     4741 ttttctggca atgaagagaa acgcaccacc gctttaccac cctcatcggc aatggtggtc
     4801 tcagacacta atgatacgtc caagagcaaa aataatcaag gggcctccgc tgctgcgtct
     4861 tctgcttctt caacctcatc cagatcctcc aaatcatctg cctcgtcctc gtcctcgtca
     4921 tcatcatcat cgccagcttc tgttagtaat tcctttgtat atcatcgcgt tgtcgatgca
     4981 tcaccgcgcc tcgtgggtgc cggtttgaca ggacgcaaac agcgtctgcc atttgtggcc
     5041 atcaccgacc gacgtttgga gacttcaaag aaatccttaa cggatcatca aaaagacttt
     5101 gaacaaaatc actatccgtt gccttaaaca caaaaacaaa agtaaaagaa taccaacaaa
     5161 caaaagacag tatcacaaaa caccgaataa gaaaaaaagc gaaatatttt atccctccct
     5221 ccccaaaaat ccaaaaaaaa aaaaaaaaaa aaacagaatc cccttctaat aataaaaata
     5281 ttctaatctt atataaaaca acatggaaat acaatgatga taataatcat gggagaatta
     5341 ttggcattag tgatggtagg tatagaaaac aacaataaaa caaaaaaagc agaagggaca
     5401 aaagtgtcta agggaccgtt tcacaaactt caactaaaaa ttg