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LOCUS XM_013242469 2937 bp mRNA linear INV 02-SEP-2023 (LOC106080868), mRNA. ACCESSION XM_013242469 VERSION XM_013242469.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013242469.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2937 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..2937 /gene="LOC106080868" /note="synaptobrevin homolog YKT6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106080868" CDS 260..856 /gene="LOC106080868" /codon_start=1 /product="synaptobrevin homolog YKT6" /protein_id="XP_013097923.1" /db_xref="GeneID:106080868" /translation="MVKLFAISVFYKDVEGRLLKSTYDLQSFSFFQRGTVQEFMTFAS KTLVERTQPAMRQSVKQDVYMCHVYVRTDNLAGVLIADHEYPQRVAHTLITKFLDEFS AKIPVDQWKTGTESSIDFNVLPTYLAKYQDPKEADALTKMQNDLDETKIILKNTIEAV LERGEKLDDMVIKSENLSIQSKAFYKTAKKTNSCCNFG" misc_feature 269..844 /gene="LOC106080868" /note="Synaptobrevin/VAMP-like protein [Intracellular trafficking and secretion]; Region: SNC1; COG5143" /db_xref="CDD:227472" polyA_site 2937 /gene="LOC106080868" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgataaacgg caaccattaa ccatattgtc attaggcata tagtaaaatt aagaaattaa 61 acatattttt cgtggaaaat caggctcaaa tagacaaatt aatagtattc accagcgaga 121 catcaaaatc tttcaaaggt tcccaccatt tagtgaaagt agtataagga agacgcccaa 181 aaccaacgca tagttgaaaa atagcaagca acaagaaacg caaaatctca taaatagtac 241 actagaaaaa aatctaaaaa tggttaaatt atttgctata agtgtcttct ataaagacgt 301 ggagggacga ttgctaaagt ccacatatga tttacaatct ttctcatttt ttcaaagagg 361 aacggtacag gagttcatga cttttgcatc gaagacattg gtagaacgca cacaacccgc 421 tatgcgccaa tctgttaaac aggatgtata catgtgccat gtttatgtgc gaacagacaa 481 cttggccgga gttcttatag cagatcacga atatcctcaa cgtgttgcac atacattgat 541 cacaaagttt ttggatgaat tctctgctaa gataccagtc gatcaatgga aaactggcac 601 cgagagtagt atagacttca atgtattacc cacatatttg gccaagtacc aagaccccaa 661 agaagcggat gccttaacaa aaatgcaaaa tgatttggat gagacgaaaa ttatattgaa 721 aaatacaatt gaggcggtgc ttgaacgagg tgaaaaactg gacgatatgg tgataaaatc 781 agaaaacctc tcaatacaaa gcaaagcatt ctacaagacg gccaagaaaa cgaattcatg 841 ttgtaatttt ggttaaggaa tagaaggtat cttgtaaaag ttgtcgaagt tgcaggcata 901 tataatacaa gtctggataa aacaaagtta agtgaagtaa ctaaagaaaa attagcgaga 961 tgaagggcgt acaatttccg aaaaatcttt gtatttatat ttgtttggac cgaagtgtat 1021 tcaaaaaagg acaaaattac tttacatttc ggtaacattt tgtgagaaaa tttatagctg 1081 cctgtgtgtt gctgattgaa tatatgaaac tatttcactt cggggaatta tttttgaaaa 1141 tttttatttt ctaatcgaat gagaatagta acgaacgtat ttttctctat ataccgctgt 1201 aggcaacttg aagttgcctt ttattaatgt ataccatcag gcatcgcaaa gttgcacaat 1261 acttttattt cgtagaactt ttaaacgtgt cccagtttgt tttggagtgt aagcaaattt 1321 tgagatagcg gtataaattt ttagaaaagt tttcttttta atataaaata ccacagatat 1381 attatatata aattcaaagg taggtaggta gattgttcgc atacaatatg agagtaatgt 1441 atattagggt ttagaacggt atggaacgta atttcgtaat ggttgcaagg catatcaaaa 1501 catactttaa tgttcttcga gaaaccattc catttaggat tgcacgggag atcctttttt 1561 tatacttctg tccctaagaa atgaaacggt gaaccaatca aatgcagaaa atcgttgcga 1621 ggcatatcaa atcaggagtg cgatttcatg gaggctatat aaagttttaa accgatttag 1681 accatactcg ccatgaaagt ttaaagtcgg aaaaaacact acctactcca cgcaacctaa 1741 ctacgttagt cctctagtcg aaaaagtacc gggaaatgct atagtaatga tttttccaca 1801 cctgatatat atggtgcctt caaatttgtt ataataattg ttattaaccc aattgccatt 1861 actgttttac ccaatttagg aatactgttt ccattctcta ccacaattcc taaggttgaa 1921 aaaatgcatt taggatagga tgatcccttt tttattcttc tgtctctaaa taataaatcg 1981 gacgctgaac caataaaatg cagaaaaaca gccactgatc atcaatgagt catcaccatg 2041 tctctgcctt ctagagttgc taaggattat ttctttggtc ctggtattag tttgcttctg 2101 ccataacgag tatccggtaa ataaatgagt tttagggtca ccgttcaaaa ttcaacaggc 2161 ccacgaataa ttaggttcag cttttaccag aagtaattat gttttttaat ctttttattt 2221 aattgagatt acattgcagg atattgtccg gctttagcat agcatagaag ttgttgtccc 2281 catttgttgt tccaccaccg tataaaagca tggttttggt cttttcatca atttttcgcc 2341 atattcgatt tttttgaaaa attacttttc cgattccctg tctcctgcta aattctttgt 2401 ttgcttcact tcattgttca gcttgtattg tgtatgaaat acagttaaac aattttgttt 2461 ataatatagg aaaaaaatac ttcatttgat taaatcaatt tatattttta aattatctag 2521 tttgatttta tataaatata tatttttcat ttaaatagaa aagcttctgt ataaaaattt 2581 attcaccctt atttcgtttg gcgaaggcca aatcgaaatt tggtactttt acaaaatgat 2641 attttggttg tcgaggacga aaactctttc acatttttgg tgccacgtta gtcaaattcg 2701 atggagaatt taagcgaaaa cgattagtat ataagttaat gacactctta cgtacttcac 2761 acgtgtatat ttctattttt ctattagcaa ataaattacc ttcgattacg actgctgtcg 2821 aatttcgtct tcgacaaccg aaataagggt gattacaaat atatgcaaag aatacagcat 2881 atatacagga aatgaaagca tatacattaa aaattttaaa atcaatttgc aacttca