PREDICTED: Stomoxys calcitrans C-signal (LOC106080854), transcript

LOCUS       XM_013242450            1012 bp    mRNA    linear   INV 02-SEP-2023
            variant X4, mRNA.
ACCESSION   XM_013242450
VERSION     XM_013242450.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013242450.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1012
                     /gene="LOC106080854"
                     /note="C-signal; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 Proteins"
                     /db_xref="GeneID:106080854"
     CDS             220..963
                     /gene="LOC106080854"
                     /codon_start=1
                     /product="C-signal isoform X1"
                     /protein_id="XP_013097904.2"
                     /db_xref="GeneID:106080854"
                     /translation="MNSILITGCNRGLGLGLVKALVKLPKPPQHLFATCRNKDQAKDL
                     LNLAAQNSNIHVMEIDLRDYYSHDNLVKQIDDITGGYGLNLLFNNAGISPKSTRINMT
                     KAEDIMNTLETNTVVPIMLAKACLPLLKKASKSQESLDLCVQRAAIINMSSMLGSIEM
                     NETGGLYAYRTSKAALNAATKSLSIDLLPHNILCVALHPGWVRTEMGGKNAPLEVDPT
                     TAEIIDTIMKFKAKHNGGFYQYNGDKLPW"
     polyA_site      1012
                     /gene="LOC106080854"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcctaacgtt tgaggtggcg gcagagttag ctacaactgt cggtttggtg gaacgtacaa
       61 atgtaacaac cagctttgaa ttccatataa ttattcgtcg tggaacagca cacggcactt
      121 acaagatcga gaatttgcca ccaagatctt aatttggaat aaattaaact agcgtatcgg
      181 agagacctat atcgtcgttg ccttctttct acctacaaaa tgaattcaat tttgataacc
      241 ggatgtaatc gtggtctggg tttgggtttg gttaaagctt tggtgaaatt gcccaaaccc
      301 ccgcaacatt tgttcgccac atgccgcaac aaggaccaag ccaaggacct tctaaatttg
      361 gctgcccaaa attccaatat tcatgtaatg gaaattgatt tgcgcgacta ttattcccac
      421 gacaatttag ttaaacaaat agatgacatc acaggtggct atggtctcaa tctactcttc
      481 aataatgccg gaatttctcc aaaatcgact aggataaata tgactaaggc agaggatata
      541 atgaatacat tagaaaccaa cacagttgtg cctattatgt tggctaaagc ctgtttacca
      601 ttacttaaaa aagcctccaa atcacaggaa tctctcgatt tgtgtgtaca gagggctgct
      661 attataaata tgagctctat gttgggatca atcgaaatga atgaaactgg tggcctctat
      721 gcatatcgga cttccaaagc tgctttaaat gctgcaacaa aatcgctgag tattgatttg
      781 ttgccgcata acattctttg tgttgcctta catcccggct gggtgcgcac agaaatgggt
      841 ggaaagaacg ctccattgga agttgatccc acaactgcgg aaatcattga tactatcatg
      901 aagttcaaag cgaagcataa tggaggtttc tatcagtaca atggtgacaa attgccatgg
      961 tagttaagac taagtgatat aaatgaataa aatgaaattg cttgcaacta aa