PREDICTED: Stomoxys calcitrans C-signal (LOC106080854), transcript

LOCUS       XM_013242448            1170 bp    mRNA    linear   INV 02-SEP-2023
            variant X2, mRNA.
ACCESSION   XM_013242448
VERSION     XM_013242448.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013242448.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..1170
                     /gene="LOC106080854"
                     /note="C-signal; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 9 Proteins"
                     /db_xref="GeneID:106080854"
     CDS             378..1121
                     /gene="LOC106080854"
                     /codon_start=1
                     /product="C-signal isoform X1"
                     /protein_id="XP_013097902.2"
                     /db_xref="GeneID:106080854"
                     /translation="MNSILITGCNRGLGLGLVKALVKLPKPPQHLFATCRNKDQAKDL
                     LNLAAQNSNIHVMEIDLRDYYSHDNLVKQIDDITGGYGLNLLFNNAGISPKSTRINMT
                     KAEDIMNTLETNTVVPIMLAKACLPLLKKASKSQESLDLCVQRAAIINMSSMLGSIEM
                     NETGGLYAYRTSKAALNAATKSLSIDLLPHNILCVALHPGWVRTEMGGKNAPLEVDPT
                     TAEIIDTIMKFKAKHNGGFYQYNGDKLPW"
     polyA_site      1170
                     /gene="LOC106080854"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccttaccacc atgtgtgtta gtggcgaaat attaaaaaaa taacaacgtt gagggctaca
       61 gttagaataa cgagtagatg tgaaaaacac aaaggctata aagaatgtca atataaaaca
      121 aaaacaacga ctgcaaaaga taaactcaag aatttgtgat caagtgaatg actttgcaca
      181 ttcaatagac tataaaaaaa agtgtaaata taaaagcaaa tactgacaat tgttccgcag
      241 ttattggatt attcgtcgtg gaacagcaca cggcacttac aagatcgaga atttgccacc
      301 aagatcttaa tttggaataa attaaactag cgtatcggag agacctatat cgtcgttgcc
      361 ttctttctac ctacaaaatg aattcaattt tgataaccgg atgtaatcgt ggtctgggtt
      421 tgggtttggt taaagctttg gtgaaattgc ccaaaccccc gcaacatttg ttcgccacat
      481 gccgcaacaa ggaccaagcc aaggaccttc taaatttggc tgcccaaaat tccaatattc
      541 atgtaatgga aattgatttg cgcgactatt attcccacga caatttagtt aaacaaatag
      601 atgacatcac aggtggctat ggtctcaatc tactcttcaa taatgccgga atttctccaa
      661 aatcgactag gataaatatg actaaggcag aggatataat gaatacatta gaaaccaaca
      721 cagttgtgcc tattatgttg gctaaagcct gtttaccatt acttaaaaaa gcctccaaat
      781 cacaggaatc tctcgatttg tgtgtacaga gggctgctat tataaatatg agctctatgt
      841 tgggatcaat cgaaatgaat gaaactggtg gcctctatgc atatcggact tccaaagctg
      901 ctttaaatgc tgcaacaaaa tcgctgagta ttgatttgtt gccgcataac attctttgtg
      961 ttgccttaca tcccggctgg gtgcgcacag aaatgggtgg aaagaacgct ccattggaag
     1021 ttgatcccac aactgcggaa atcattgata ctatcatgaa gttcaaagcg aagcataatg
     1081 gaggtttcta tcagtacaat ggtgacaaat tgccatggta gttaagacta agtgatataa
     1141 atgaataaaa tgaaattgct tgcaactaaa