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PREDICTED: Stomoxys calcitrans glycine-rich selenoprotein


LOCUS       XM_013242424             920 bp    mRNA    linear   INV 02-SEP-2023
            (LOC106080837), transcript variant X2, mRNA.
ACCESSION   XM_013242424
VERSION     XM_013242424.2
DBLINK      BioProject: PRJNA1009844
KEYWORDS    RefSeq.
SOURCE      Stomoxys calcitrans (stable fly)
  ORGANISM  Stomoxys calcitrans
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Muscoidea; Muscidae; Stomoxys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081555) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 2, 2023 this sequence version replaced XM_013242424.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963082655.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/29/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Stomoxys calcitrans"
                     /mol_type="mRNA"
                     /db_xref="taxon:35570"
                     /chromosome="4"
     gene            1..920
                     /gene="LOC106080837"
                     /note="glycine-rich selenoprotein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:106080837"
     CDS             121..432
                     /gene="LOC106080837"
                     /codon_start=1
                     /product="glycine-rich selenoprotein"
                     /protein_id="XP_013097878.2"
                     /db_xref="GeneID:106080837"
                     /translation="MVYIDRDGRVLEKRPWDMARIMGIFTGIWLVVVQFFQTLIAPFN
                     QENRGGNRRSDGGGWGSGGGYGGGGGGGGSGGGGNGGLRPNRRIGRVTNSMDCNIPGG
                     G"
     polyA_site      920
                     /gene="LOC106080837"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccacgtcatt tttaaaatcc acaacgcaaa atttagttat attcttcgat ttttcaggaa
       61 ataaacgctt gcagaagaaa gttctagttt ttgcataatt tatgcggtcg ccattataaa
      121 atggtttaca tagatcgcga tggtcgagtt ttggagaaac gaccttggga catggcccgc
      181 ataatgggca ttttcacagg gatatggctt gttgttgtac aattcttcca aacactcatt
      241 gcgccattta accaagagaa ccgtggtgga aaccgtcgca gtgatggtgg tggatgggga
      301 tccggtggtg gttatggcgg cggaggtggt ggtggtggta gtggcggtgg gggaaatggt
      361 ggccttcgtc ccaaccgtcg tattggccgt gtaactaatt caatggattg taatataccc
      421 ggaggcggat gagcacggta aagtgtccag gcattttgta cgagtaatgc tgcttgtatt
      481 atacagtgca attcacgatt aattggctat ttttatcggt tatcacatga tatcgatgaa
      541 tctccagttc aacttttcac tggaatgaac tgcactgaat agaactaaaa taaaacatgg
      601 caaatattac tcgcctggac acagctgacc ccgttaacca atccctaaca gcatcaacat
      661 catacaaagt tttttttttt ttttttaata tgctcacaaa ttcacttttc ggtacaaagt
      721 tacctttatg acgacccact tgtaaactca acccagaggg aagtgagtct gatctttaac
      781 aagagtgatt tttgtgcata taaactttgt gggattgaat tttagtaaaa tttttataaa
      841 tattgaaata catatatttt tgtgtattat actcatttat ttttgatcaa aatacaacgc
      901 atcttataca aacaaactta