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LOCUS XM_013242306 8082 bp mRNA linear INV 02-SEP-2023 (LOC106080773), transcript variant X1, mRNA. ACCESSION XM_013242306 VERSION XM_013242306.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013242306.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8082 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..8082 /gene="LOC106080773" /note="uncharacterized LOC106080773; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:106080773" CDS 935..3403 /gene="LOC106080773" /codon_start=1 /product="uncharacterized protein LOC106080773" /protein_id="XP_013097760.2" /db_xref="GeneID:106080773" /translation="MHLYLAFIFGISIQMSKFVAARFCEGGHICSLPRECCTQGCCPP YQSGPRQLPPPSEHVLNLFFISHWFFWCVVVAIILAILCAYSLWKKRRTLCGWGFNEH HAQSEGDSAGSCYAPPQYSRCNSFHHPPPPYTEVTSKPDLYPLVFTCNSDNGKNGSSY LMVQYFRNYIVRPAGSLSAASTVDSLSSSFICNINEANTLVPPPYSRAASPEIGFSSH FQQQYMMPRSASQLVCQNVSNSNFIGSGGNGAGLVSSGNGQFELSNSPQMYSSRSSNT HYATVTVNATVNRLNSSATGSDRVRERVTNFNGNQLDYESTLSYEDAPESDERTNDNI NANVINCSSSSNDLRTLPNSTGFVQSQSDQHFRYITNSNSSISDIFVNNSCAAGIGGG GSNRLHRSEDSSIVGSITGVGASAAVVHPQAGGTPVIYSNGCIKPIPLHRASTNPTQF HVDASSNREAVLYQSNNSIGGISITVPTGIEDSAIICNDNEIRDLQLLRRSLETCCQL LQQQQKIPAGGFALGESPLRMNELSKKYIDEGLLRSYVTSGTCSGVSSLANIGTPSSP PQATSPTGEVKEILDQIRQLQEGVTKYEEDLAFRSVGRPTLHHTLSSPAPTVNRTTPH LADSGGKLQRISTMPEQQSLAEAAKANILVKSIASNSPTNSMTSVPSTSSVLVGTQPN KLTNSKSSLSGGGSGSGSASAIGGFIFSSSTSKRPSTLQHSKKRFYTSKPPNKAMYIP MMATNQVPTSSRCTMLKSPVTSVVNSNFFTNRGNRQRKCWISRSAPTTPATPLPPSYM DDDSPLLNEQDEDQEGEQNAEMDS" polyA_site 8082 /gene="LOC106080773" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccaacactca ctcacacaag ctacagatgg aacagacaat agttagcaac attcgttacc 61 ccgcatccgt atccgtaacc acctacacac caaaacgagc gtcctttaga ttcacaaaca 121 aaatagttgc agtaagtgtg cacttagaaa aactatacca gcaccttcat ataataaaga 181 gtgtgtgtaa atattaatta aaaacaaaaa caatttccct ggcactctcg cgtacatcac 241 ccaaaacaca cacatccctg catgtgtatg agcgaaggta cttgatggtg tttgtatacg 301 tacaaatata caattgccag taaaagtatg cgctagctcg ctcgtcttcg tcgtttttgt 361 cgcacatcaa aaggaaatac aacaataata aacaaataaa atgagaaata tggaaacaac 421 actagcgccg ccagaagtag tgcgaaaaat gtttgcatgt gcgtgtaagt gttcaagata 481 aatgcatgaa attgcattgt acactggttc caaggacaac gaacagacaa acgtggactt 541 gcggtggggt aaaggcaaca tttctctatg tcagtgtcag cagcaatctg aacaaagtca 601 tcacaaacgg tatccttcac atcctctctc attcgctcgt gctgtgcact ataccactat 661 actcgtgcca acgccacccc acaccattca tttgcatcat cgttcgcatc tccaagaata 721 acaattgtac ggtgtagcgg gaagtgcagt agtacccaaa agaaggacat tccaaagtat 781 acccgtgtgt caaaaaatgc cataacaaca gccaacaata acaacaacag atgcaacatc 841 aagcaaaagg gggcaaataa actcaaatac aaacaatcca aacctagagg acatcattct 901 tctctcatca cactttttct tggtagcagt gaaaatgcat ttgtatttag cctttatatt 961 tggcatttca atacaaatgt ctaaattcgt tgcagcgcgc ttctgtgaag gcggtcatat 1021 atgttcctta cctcgagaat gctgtactca aggctgctgt ccaccatacc aaagtggacc 1081 acgtcaactg ccaccgccct cggagcacgt gcttaattta ttttttatta gtcattggtt 1141 cttttggtgt gttgtggtag caattatttt agccatcctc tgtgcctatt ctctgtggaa 1201 aaaacgtcgc acactttgcg gctggggctt caacgaacat catgcccaat ctgaaggaga 1261 ctcagctggc tcatgttatg ctcctccaca gtacagccgt tgcaattcat tccatcatcc 1321 gccaccaccc tatacagagg tgacctcgaa gcctgacctc tacccattgg tgttcacttg 1381 caatagtgat aatgggaaaa atggttccag ttatctcatg gttcaatatt tccgcaacta 1441 catagtgcgc ccagctggtt cgctgtcggc agcaagtacc gtagactcgc taagctctag 1501 ttttatatgc aacatcaatg aagcaaatac tctggtacca ccgccgtatt caagggcagc 1561 cagcccggaa attggtttca gttctcactt tcagcagcag tacatgatgc cgcgttcagc 1621 atcgcagctc gtgtgtcaaa atgtcagcaa ttcgaatttc ataggcagcg gcggtaatgg 1681 agctggactg gtatctagtg ggaacggtca attcgagcta agcaacagcc cacaaatgta 1741 tagcagccgt tcctcgaaca cacactatgc cacagtgacg gtgaatgcaa ctgtgaatcg 1801 cctgaatagc agtgctacag gtagtgatcg agtccgagaa agggtaacca acttcaatgg 1861 caatcagctt gattacgaaa gtacgctctc ctatgaagac gcgcccgaat cggacgaacg 1921 cacaaacgat aatataaatg ccaatgtgat aaattgtagt agtagtagta acgacctacg 1981 caccttaccc aatagcaccg gatttgtgca gtcccaaagt gaccaacact tccgatatat 2041 aacgaacagc aacagtagca tcagtgatat ttttgtaaac aatagttgtg cagctggaat 2101 tggtggcggt ggttcaaacc gtctacacag gtcggaggat tcgtctattg tgggctcgat 2161 taccggagtt ggagccagtg cggccgtggt acatcctcag gctggaggaa caccagtgat 2221 ttacagcaat ggctgcatta agcccatccc tttgcaccgc gccagtacca atcccacaca 2281 gtttcatgta gacgcctcct caaaccggga ggcggtattg taccaatcga ataattcaat 2341 aggtggtatc tcaataacag ttcctactgg aatcgaagat tcggcaatta tatgtaatga 2401 caacgaaatt agagacttgc agctgttgag acgaagtctt gaaacctgct gccaactgct 2461 gcagcaacag caaaaaattc ccgcaggtgg ttttgccctg ggcgaatcac cactgcggat 2521 gaatgagcta tcaaagaagt acatagatga gggactactc cgcagctatg tgacatcggg 2581 aacctgttct ggcgttagca gcctggccaa cattggcacc ccaagttcac cgcctcaagc 2641 tactagcccc acaggcgaag taaaggaaat ccttgaccaa atccgacagc tgcaggaagg 2701 cgttaccaaa tacgaagagg atttggcttt ccgttcagtt ggtcgaccca ctctacatca 2761 caccctgtcc tcgccagccc ccaccgtgaa tcgaactaca ccacatttag ctgattcagg 2821 tggaaagctt caacgcatct caactatgcc tgaacaacag tcgcttgctg aagccgccaa 2881 agccaatatt ttagtaaaat caatcgcaag taactcaccc acaaactcca tgacttcggt 2941 gccctctaca tcctctgtat tggtgggcac tcagcccaac aaactaacca atagcaagtc 3001 ttcgttgagt ggtggcggta gtggcagcgg ctcggccagt gctattggcg gcttcatatt 3061 ctcgtcctca acgtcgaagc gtccctccac tctgcagcac agtaagaaac gtttctatac 3121 atcgaaacca cccaacaaag ctatgtacat tcccatgatg gccaccaacc aggtgcctac 3181 tagcagtcgc tgcaccatgc ttaagagtcc tgtgaccagt gtagtaaatt ccaatttctt 3241 tacgaaccgt ggcaatcgac aacgcaaatg ttggatttcc agatcggctc cgaccacacc 3301 tgccacgccc cttcctccca gctatatgga tgacgatagt cctctgctga atgaacaaga 3361 cgaagatcaa gagggagagc aaaacgcaga aatggattct tagttttctg catcaaatcc 3421 attaaggaat tttaaaacaa ggtccaaata gataatgtca gattatatcg agttacagaa 3481 acataatttt tttgcagcca tatagctctt ggaaagttat gtgaaattta gaatggtatg 3541 agcttcagta ttgatgacac agtaatcaga ctgcactcca catttgggat tagaatggca 3601 aggtattgag catatgcata cccatgaaaa tcgtattgag aagaagagag aaatgaaaat 3661 gtaaattata cagtgaggtc catctgttat ccatttagtc ccttttatca acgtacccat 3721 ggacttttcc caaattactg ttgagaatcc atttttaaag ggtgtcgcca aaaattttgt 3781 gctgagagta aatttttaat atgcgtttta ccttgagaga aattgaacaa ctaaaaatgc 3841 ttgtaactcc ttaggtagtt ttcgtaggtc ggtctaagat cgaccacaaa gaacttgctc 3901 aagcgatcaa catgtgttcc ttgtgagtag tgagccacgt atacctcttc acatctgcat 3961 cttgtataat cttctctagc aggatattaa agacataacg cttgtctctc tgtatgatat 4021 ctcatttcgt attgaactct tctactattc aatagtcttt cctattctaa ctgacgaacg 4081 tgtatccgta agcgttatcg tattaaatag ccttaaacgc atagcgtttt gagcaaattg 4141 agcgctgagc tggctgtcct cggtattgcg tattcgttac tataaactct acgtgataaa 4201 aacgactgta aataggggag catttgtggc aacaactatc tacggacggt tattctacct 4261 agaggtgcaa ataagtttgg atacgagcca ggagtggatg aaacttgatg cggatgcaag 4321 cttagtgcga atgcgagcta gacgcgaatt taagtgcgtt tccctcaaga aacgtagcaa 4381 atgaggggag aagtcgctcg gctagaatgt tgtagcactc ggccaactct tcgaatcgct 4441 gtaggaatcc tgataagacc cccttggtat attctgtatc gcttatagcg ctacgttaat 4501 tctatgcttc gcaattcttt ccacttttac ttcatcttct atgtctcgta gtgagttttc 4561 gggtgacgct cacatccttt ttgttcggat atgttcgcta cgctgttttc ttaggtgatc 4621 tccagttaaa ccttcggtgg ccaaccctaa tttttggctc tgttcaagga gttggtcgcg 4681 tttgagtaag taaatccagc tgagagattc tgggccaaga tttgaggcag gttcggtgtt 4741 tctgcagtgc gtattagctt cgggtccctg ctcgggcgcc atttgtaacg tggtaaggtt 4801 tagtcgcctc caatttcatc ctaaggaccc attaatatta agaggtaaca caagttaatt 4861 agaatcgagg tctgacgata aggtgacttt attggtttaa tttagtgatg ggcactaaat 4921 accactattg aaaaaaccaa actgtgtttt tgtgagtatc atcaaacatg aactaatgaa 4981 atagttttaa aatagagtca gccgaacgaa gcaacaggaa gttgtttacc ctgtacgcgt 5041 acgaccgcat tcccgcgggc ataggaattt atgcgcggat gtgtatgctg cccatctatg 5101 gtttaatcct atgttacaat gtgcttgcac tatatatgtg tgtgtatgac aatgtggcga 5161 agggtgagta ggttgtcgtc ttcggcaatg gagaggccct cgcaagttca tggccccctt 5221 attgctgctt ctctccgatg cagttgccga aggcaggcga tatattgttg atcggtaatt 5281 tttggtgggc gttgatgcgg gctcggcggg tgtaatttcg atgttgggcc acaagttata 5341 ggcctcttat tgatgctctg tagatgacga aaatatggta agtgtcgacc tctccttctt 5401 aagtcctttc ttagatctga cgcagtgtga atatggtaga tttaccacat ttaaagccgc 5461 attgataggg cccaaatatc tccttgactt tagattttaa tctttcacac agtacactcg 5521 agagtatcat atatgtatac ttcctatcag tgtgtcacct ccggtctgta ataattcagg 5581 tggcaaccca tcgattcctc ttgccttatt ggtaattact actagttgga ccagaagaca 5641 aaccattatt agggatttcg cagaattttg ggacagtgag ttgtgttaag ccctttgata 5701 tctctctgca atttggccca gatcggtcca gtttgaatat agctgacata tagaccgatc 5761 tctcgattta aggtttaggg cccataaaag gcgcatttat tgtcggatgt cgccgaaatt 5821 tgggaaagtg agttgtgtta gggccttcga catccccctt catttttgcc cagatcggtc 5881 cagtttgaat atagctgctc tctcgatcga acccataaaa ggcgcattta taatccgatt 5941 tcactgaaat ttgactcagt gacttatgta aggctctacg acatccgtgt cgtatatggt 6001 tcagatcgat ctatatttgg atataactac caaaaagacc aatatttagc tctacaaaat 6061 tgaacaatga cttatactta ttagaccaca caatgttcgt gacgaatttg gtccaagtca 6121 gaccatatat ccttttagct gctatggggg cataaattat gatttttcgg cggattatga 6181 cgaaaggtgg tttacatata tacccaaggt tctgagtatc caaagttcgg ccgggccgaa 6241 cttaacgcct ttttatttgt ttttttttta tttcttctta tacccaccgt caatggacaa 6301 gtttgcaaca tctaccaata ttcaactcca attatatgta ttcttgatcg ccgtcttaat 6361 tggactatat ctttaaaaag cccccatata tatagatgtc ccgattttac ttcttaagcc 6421 cctagaggac gcaattctta tccaaaattt cagtcaaatc agacaaaaaa ttgcggcttc 6481 caagggctca agaagtcaaa tcgggatatc ggtttatatg ggagctatat caggttatag 6541 accgatttgg accgtactaa gtacatttgt tcgaagtcat agcagaatac tatgtgcaaa 6601 atttcagcca aatcagacaa aaattgcggc ttccaggggc tcaagaagtc aaatcgggag 6661 atcggtttat atgtgagcta tatcaagtta tagaccgatt ttaccgtact tggcacagtt 6721 attggaagtc gtaacggaac accatatgca aaatttcagc cagatcggac aaaaattgcg 6781 gcttccaggg actcaagaat tcaaatcggg agatcagttt aaaagagagc tatatctaaa 6841 tctgaaccaa tgtggcccat ttgcaatcgc caatgaccta catcaatatt aagtatctgt 6901 gcaaaatttc aagaggctag atttacgtat tcgaccgcta ccgtgatttc aacagacgga 6961 cggacatggc gaggcgttca agattatata tacttcatgg agtcttagac gaatatttcg 7021 aggtgttgca aacggaatga ctagattagt atagccccat cctatggtgg tgggcataaa 7081 aatatgtgtt taaagtgttt ttttatgttg tcggagcgga gcggtttttg agaaaggaaa 7141 ccgctccgct cttggtttta aaaaattacc tcccgctcgg gcaaaattag gcctgctccg 7201 ctcctaataa ctggtcgagt ggaccttttg cgcttgctgc tcgtggtggc ttaattttac 7261 gtccgttaga cttaagatat tcttccttcc tattttagag tttagtttgc ttgcatgatt 7321 ttaatgcatt gcgcgggaca ccatttaaat gttcataaaa tacatccttg gtttgttcgt 7381 ccttgtctcc tgtctgggga tgagcccaga taagactgat ataaaagaat ttgtctataa 7441 tgcagattgt gccaaattca tgttttgcct atggtgcagt ccgtcaccat tcaatgttgt 7501 tgttatgcct ctcccattcc attggacttc cggtaaagcg gtaatattgg ccttgtactc 7561 ttccattaca tcctcctgca ccatctcggt aaggagttaa cacaatttca gatgcagatc 7621 ctcagttcat ggcccttaac tcgtttgcgg ggttcgtcat acctatttaa acaaacaatt 7681 ttaacagcat tccagaataa cgagctattg tgcaacaaag agattgtgcg atctgtactt 7741 gatagcgtag aactttaaga attaacccat gcattgtagt atttacttag aatttttttt 7801 agtcttaact ttatttaaaa taataattct atatatatag ttatattggt aaacatatta 7861 gatgatgcta atgtatgtga tacatagaga aaaaaataat ttttgtaagt tgagtactag 7921 cattcgtttt gtgttaacct cgttagttaa atagctatta ctaaataaaa atttgattga 7981 catttccaga taaacacaaa agtttgagca ttgcttaaat tcaacgaagt tagtttcaat 8041 tatcgtgaaa taataaataa taaaatttgt ataatcatga aa