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LOCUS XM_013242301 1897 bp mRNA linear INV 02-SEP-2023 (LOC106080770), mRNA. ACCESSION XM_013242301 VERSION XM_013242301.2 DBLINK BioProject: PRJNA1009844 KEYWORDS RefSeq. SOURCE Stomoxys calcitrans (stable fly) ORGANISM Stomoxys calcitrans Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Stomoxys. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081555) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 2, 2023 this sequence version replaced XM_013242301.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_963082655.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1897 /organism="Stomoxys calcitrans" /mol_type="mRNA" /db_xref="taxon:35570" /chromosome="4" gene 1..1897 /gene="LOC106080770" /note="dnaJ homolog subfamily C member 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:106080770" CDS 84..1664 /gene="LOC106080770" /codon_start=1 /product="dnaJ homolog subfamily C member 1" /protein_id="XP_013097755.1" /db_xref="GeneID:106080770" /translation="MRKIIYTGIFLLWVLQVSNVQAWDTEELEIFDLVEEIKTNFYEF MGLKQNASGQEIKRAFRGLSIQLHPDKNPSEDANIQFRNLVSIYEVLKETSKREKYDK VLKEGLPNWKSALYYYRRMRKIGLYEGAGILFLIITIGQYLFAWAAYLEKKYTAEQVL GSKLKKLQKKNKNIDMDTILNEIPTPSFKNTLPIQIPMFVWNLPKTIKGAFNKANELK ELALEKRRQELEEAKRQEEQEREAEELVRMRKEQKENLRRRKQNTKAPEKTDEELKGY SQIQGRELTEDDAVKPVTQKSQLSGGFWTDEDLAELIRLVKKYPAGLGNRWVIIGEAM NRTVQEVTFMAAKMKENGYRLPGQTDSVAENIIQETQQLTKKEKTKQDKSIVIPETNW TQEQQKALEAAIVKYRKTAGSDRWQKIANSVPGKTKEECLVRYKYLCELVKSQKKSEE TENNETNEDQEGPAESEVISSTNSQPEVAQAVTAEEFADDLPEKGGKKRNKRKERRRK RDLSSDEDSDDAYTYEVN" misc_feature <132..>548 /gene="LOC106080770" /note="Ring-infected erythrocyte surface antigen; Provisional; Region: PTZ00341" /db_xref="CDD:173534" misc_feature 201..386 /gene="LOC106080770" /note="DnaJ domain; Region: DnaJ; pfam00226" /db_xref="CDD:395170" misc_feature order(285..293,315..317,324..329,336..341) /gene="LOC106080770" /note="HSP70 interaction site [polypeptide binding]; other site" /db_xref="CDD:99751" misc_feature 1254..1397 /gene="LOC106080770" /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is...; Region: SANT; cd00167" /db_xref="CDD:238096" misc_feature order(1257..1259,1359..1364,1368..1373,1377..1385, 1389..1397) /gene="LOC106080770" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238096" polyA_site 1897 /gene="LOC106080770" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aatgtcagaa atatgcaacg taggttttga gttgaaggta tctcgtctga aagggctagg 61 aaacccaaag gtccacaaca accatgcgga agataattta caccggtatt tttcttctct 121 gggtgctcca agttagtaat gtacaagcat gggatactga ggaactcgaa atttttgatt 181 tagtagaaga aatcaaaaca aatttttacg agttcatggg actcaagcaa aatgcttccg 241 gtcaggaaat aaaaagagct ttccgagggc tgtcgataca gttgcatccg gataaaaacc 301 cctcagaaga tgccaatata cagtttcgaa atttggtgtc aatctatgaa gtactaaagg 361 agacttcaaa gcgtgagaaa tatgacaagg tattaaagga aggactgcca aattggaagt 421 cggctctgta ttactatcgc cgtatgcgca agataggttt gtacgagggt gccggtatac 481 ttttcttgat cattaccatt ggccagtatt tgtttgcgtg ggcggcatat ttggagaaga 541 aatacacagc ggagcaggtg ctgggctcta agctgaaaaa attgcaaaaa aagaacaaga 601 atatagacat ggacactata ctaaacgaaa taccaacccc atcatttaaa aatactctac 661 caatacaaat tccaatgttc gtttggaatt tgcccaaaac aataaaaggt gcattcaaca 721 aagctaacga actcaaagag ctagcactcg agaaaaggcg acaggagcta gaggaggcca 781 aacgacagga agaacaagaa cgagaagctg aagaattggt aaggatgcgc aaagagcaaa 841 aggaaaacct tagaagacgc aaacaaaaca caaaagcacc agaaaaaacc gatgaagaac 901 taaaaggcta ttcccagata caaggccgcg aattaacaga agacgatgct gtgaagccag 961 ttacccaaaa gtcacagcta agcggaggtt tttggacgga cgaggattta gcggagctca 1021 tacgccttgt caaaaagtat ccagctggtt taggcaatcg ttgggttata atcggtgaag 1081 ctatgaatcg tacggtacaa gaagtaacat ttatggctgc caaaatgaag gaaaacggtt 1141 atagattgcc tggtcagaca gatagtgttg ctgaaaatat tatacaggag acgcaacagc 1201 taaccaagaa ggagaaaacc aagcaagaca aaagcatagt tataccagaa acaaattgga 1261 cacaggaaca acaaaaagct ctggaagcag caattgttaa gtacaggaaa acagctggga 1321 gcgataggtg gcaaaagatt gcaaacagtg ttcctggcaa aacaaaagag gaatgtttag 1381 tacgttacaa atacttatgt gagttggtaa aatcacaaaa aaagagtgaa gaaactgaaa 1441 acaacgaaac taatgaagac caggagggtc cagcagaaag cgaagttata agtagtacta 1501 attcacaacc agaagttgca caagccgtta cagcagaaga atttgccgat gatcttccag 1561 aaaagggtgg taaaaaacga aataaacgca aagaaagaag aagaaaaaga gatctttcaa 1621 gcgatgaaga ctccgatgat gcttacacct atgaagtaaa ttaagttatt gttgccttgt 1681 gtcagtcccc ccgctccccc catatcttac agaacataag ccacagactt gtggactact 1741 aaacggtagt tcctctaacc ttaatttgta gtgtaactgt aatgagaaca aacgatacca 1801 cttttaattg ccatttgctt aatacaaaag aaactatata cggtgtttgg tcagatgttg 1861 catttaagtt caataaatgc tcaatgtaat aattgtt